| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is 21673517
Identifier: 21673517
GI number: 21673517
Start: 677844
End: 678410
Strand: Direct
Name: 21673517
Synonym: CT0686
Alternate gene names: NA
Gene position: 677844-678410 (Clockwise)
Preceding gene: 21673515
Following gene: 21673518
Centisome position: 31.46
GC content: 49.38
Gene sequence:
>567_bases ATGATGAACCCATCAAAAATTTTCGCCTTGGCCATCGCGTGCGGTATCGTTCTGTTGACGTTCAACTGGATGGCTCAGGC TCAGGTAATGTATGAACCGCTTCAGAACAAGGCGCCGCTGAGCATCTACAAGTATCCGAGAGTCAAGCTGGGTGCTGACC TGGAAGCAAATCTCACCCTGATCAAAGCCGATAACGGAAGGCTCAATATTACCGGCACAGTAACAAATGTGGGCAAAAGC AGTTGCAAGACAGCATCCGTGGCTGAACTGATTATGAATCTGGGTTATGCTCCACAGTATTCTTACGCGAAAACCGGTGT GTCGGACATTCTTGTTTCCAGGTCTTTCAACAATCTCAAGGCGGGCGATTCCATAGTGGTCAATGCGGTTTACCAGATTC CGGATTTTGGCGGCTGGGCATCCGCCAATCTGCCAGGCAATGCCAAACGCCTTTTCACCCTCCGCGTCATCAAGCAGGAT GCTTCATCCTACAAACCAGATGAAGACAGCAATATCGAGAACAATGTCGCAGACGACGTTGTGTTCTATCGGGATTTGAC ACACTGA
Upstream 100 bases:
>100_bases CCAACACGTAACGGCAGCACAGTTCTCAGACCAGCCGGGTGAATTCAGTGAAAATCAATACCTTGAAAAAAGCAGTCACT CAGCTCAGTATCGGAGATTC
Downstream 100 bases:
>100_bases AAGAGTGGCGCAATGAATGACTTTGAGGCATTGGTCAAGATGGCATGGTCGCAATATGGCCATAAGGTTGGCTTGATCGA TATCCAGGTTGAAGGAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MMNPSKIFALAIACGIVLLTFNWMAQAQVMYEPLQNKAPLSIYKYPRVKLGADLEANLTLIKADNGRLNITGTVTNVGKS SCKTASVAELIMNLGYAPQYSYAKTGVSDILVSRSFNNLKAGDSIVVNAVYQIPDFGGWASANLPGNAKRLFTLRVIKQD ASSYKPDEDSNIENNVADDVVFYRDLTH
Sequences:
>Translated_188_residues MMNPSKIFALAIACGIVLLTFNWMAQAQVMYEPLQNKAPLSIYKYPRVKLGADLEANLTLIKADNGRLNITGTVTNVGKS SCKTASVAELIMNLGYAPQYSYAKTGVSDILVSRSFNNLKAGDSIVVNAVYQIPDFGGWASANLPGNAKRLFTLRVIKQD ASSYKPDEDSNIENNVADDVVFYRDLTH >Mature_188_residues MMNPSKIFALAIACGIVLLTFNWMAQAQVMYEPLQNKAPLSIYKYPRVKLGADLEANLTLIKADNGRLNITGTVTNVGKS SCKTASVAELIMNLGYAPQYSYAKTGVSDILVSRSFNNLKAGDSIVVNAVYQIPDFGGWASANLPGNAKRLFTLRVIKQD ASSYKPDEDSNIENNVADDVVFYRDLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20560; Mature: 20560
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNPSKIFALAIACGIVLLTFNWMAQAQVMYEPLQNKAPLSIYKYPRVKLGADLEANLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCEEE IKADNGRLNITGTVTNVGKSSCKTASVAELIMNLGYAPQYSYAKTGVSDILVSRSFNNLK EEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHCCCCCCC AGDSIVVNAVYQIPDFGGWASANLPGNAKRLFTLRVIKQDASSYKPDEDSNIENNVADDV CCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCHHHHE VFYRDLTH EEEEECCC >Mature Secondary Structure MMNPSKIFALAIACGIVLLTFNWMAQAQVMYEPLQNKAPLSIYKYPRVKLGADLEANLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCEEE IKADNGRLNITGTVTNVGKSSCKTASVAELIMNLGYAPQYSYAKTGVSDILVSRSFNNLK EEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHCCCCCCC AGDSIVVNAVYQIPDFGGWASANLPGNAKRLFTLRVIKQDASSYKPDEDSNIENNVADDV CCCEEEEEEEEECCCCCCEECCCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCHHHHE VFYRDLTH EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA