| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yqgE [C]
Identifier: 21673495
GI number: 21673495
Start: 659906
End: 660469
Strand: Direct
Name: yqgE [C]
Synonym: CT0663
Alternate gene names: 21673495
Gene position: 659906-660469 (Clockwise)
Preceding gene: 21673494
Following gene: 21673498
Centisome position: 30.62
GC content: 54.26
Gene sequence:
>564_bases ATGACAAACGAATTTGAAATACTCAAGCCGGGCAAGCTTCTGCTGGCTTCAGCGAATCTGCTTGACCCCAATTTCAAGCG GACAGTTCTTCTCATGTGCGAGCACAACGAAGAAGGGTCGATCGGTTTCATTCTGAACAAACCGATGGAATTCAAGGTGT GCGAAGCCATCAGTGGATTTGACGAGATAGACGAACCATTGCACATGGGCGGGCCGGTGCAGGTTGATACCGTGCATGTT CTGCACACTCGGGGTGATGTGATCGATGGGGCTGTTGAAGTGATTCCGGGCCTTTTCTGGGGCGGCGACAAGGAGCAGCT CAGTTACCTCATCAATACTGGCGTTATCAAAGCCTCAGAGGTGCGTTTCTTTCTCGGTTATGCCGGATGGAGCGCGGGGC AGCTCGAAGCGGAGTTTGAAGAGGGCTCGTGGTACACCGCCGACGCATCGAGCGAGCAGGTATTCACGGATGAATACGAA CGCATGTGGAGCCGTTCCGTGCGCTCCAAGGGTGGCGAGTACTGCTATGTTGCCAACTCGCCGGAGCTTCCGGGTATGAA CTGA
Upstream 100 bases:
>100_bases GATTGATGAACAGGGCACCATCGAAAAGGTGTGGTCAAAAGTCAAACCTGAAACGCACACAGCAGAGGTGCTCGACTGGT TGCAGCAAAAAACGTGACAC
Downstream 100 bases:
>100_bases TTTTTGCAATGTTCGCCGGAACTCTCCCCAGATTCCGGTTGTTGTCAATATCAGTAGAAAATGGTATCTACGACTGACTA CCATCGTTCTTTGACCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTNEFEILKPGKLLLASANLLDPNFKRTVLLMCEHNEEGSIGFILNKPMEFKVCEAISGFDEIDEPLHMGGPVQVDTVHV LHTRGDVIDGAVEVIPGLFWGGDKEQLSYLINTGVIKASEVRFFLGYAGWSAGQLEAEFEEGSWYTADASSEQVFTDEYE RMWSRSVRSKGGEYCYVANSPELPGMN
Sequences:
>Translated_187_residues MTNEFEILKPGKLLLASANLLDPNFKRTVLLMCEHNEEGSIGFILNKPMEFKVCEAISGFDEIDEPLHMGGPVQVDTVHV LHTRGDVIDGAVEVIPGLFWGGDKEQLSYLINTGVIKASEVRFFLGYAGWSAGQLEAEFEEGSWYTADASSEQVFTDEYE RMWSRSVRSKGGEYCYVANSPELPGMN >Mature_186_residues TNEFEILKPGKLLLASANLLDPNFKRTVLLMCEHNEEGSIGFILNKPMEFKVCEAISGFDEIDEPLHMGGPVQVDTVHVL HTRGDVIDGAVEVIPGLFWGGDKEQLSYLINTGVIKASEVRFFLGYAGWSAGQLEAEFEEGSWYTADASSEQVFTDEYER MWSRSVRSKGGEYCYVANSPELPGMN
Specific function: Unknown
COG id: COG1678
COG function: function code K; Putative transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0301 (AlgH) family
Homologues:
Organism=Escherichia coli, GI87082187, Length=169, Percent_Identity=31.3609467455621, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y663_CHLTE (Q8KEM4)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661560.1 - HSSP: Q8EBZ9 - ProteinModelPortal: Q8KEM4 - SMR: Q8KEM4 - GeneID: 1006292 - GenomeReviews: AE006470_GR - KEGG: cte:CT0663 - NMPDR: fig|194439.1.peg.654 - TIGR: CT0663 - HOGENOM: HBG530212 - OMA: LIAMPGM - ProtClustDB: CLSK637423 - BioCyc: CTEP194439:CT_0663-MONOMER - HAMAP: MF_00758 - InterPro: IPR003774
Pfam domain/function: PF02622 DUF179
EC number: NA
Molecular weight: Translated: 20807; Mature: 20675
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEFEILKPGKLLLASANLLDPNFKRTVLLMCEHNEEGSIGFILNKPMEFKVCEAISGF CCCCCEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHCCH DEIDEPLHMGGPVQVDTVHVLHTRGDVIDGAVEVIPGLFWGGDKEQLSYLINTGVIKASE HHHCCCHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECC VRFFLGYAGWSAGQLEAEFEEGSWYTADASSEQVFTDEYERMWSRSVRSKGGEYCYVANS EEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC PELPGMN CCCCCCC >Mature Secondary Structure TNEFEILKPGKLLLASANLLDPNFKRTVLLMCEHNEEGSIGFILNKPMEFKVCEAISGF CCCCEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHCCH DEIDEPLHMGGPVQVDTVHVLHTRGDVIDGAVEVIPGLFWGGDKEQLSYLINTGVIKASE HHHCCCHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEECC VRFFLGYAGWSAGQLEAEFEEGSWYTADASSEQVFTDEYERMWSRSVRSKGGEYCYVANS EEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC PELPGMN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901