| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is bcp-1 [H]
Identifier: 21673494
GI number: 21673494
Start: 659432
End: 659902
Strand: Direct
Name: bcp-1 [H]
Synonym: CT0662
Alternate gene names: 21673494
Gene position: 659432-659902 (Clockwise)
Preceding gene: 21673493
Following gene: 21673495
Centisome position: 30.6
GC content: 51.38
Gene sequence:
>471_bases ATGGCACTATTGCAGGCGGGCCAGAAAGCTCCGGAATTCACCGCGAAAGACCAGGATGGCAAGGAAGTTTCCCTTCGCGA CTACACAGGCAGGAAGGTCGTTCTCTACTTTTATCCGAAGGACGATACGCCGGGTTGTACCAAGGAGGCTTGTGCTTTTC GTGACAATTTACCTAACTTTGAAAAGGTAGATGCAGTGGTGCTCGGGGTGAGCGTCGATGGGCAGAAAGCCCACCGGAAA TTCGCAGACAAGTATGAGCTGCCGTTCACGCTTCTGGTCGATGACGAGAAAAAAATCGTCGAAGCATACGGAGTCTGGGG ACTGAAAAAGTTCATGGGCAGAGAGTACATGGGGACGAACCGGGTCACCTATCTGATTGATGAACAGGGCACCATCGAAA AGGTGTGGTCAAAAGTCAAACCTGAAACGCACACAGCAGAGGTGCTCGACTGGTTGCAGCAAAAAACGTGA
Upstream 100 bases:
>100_bases CTGTTCCGGTGCCATGAAAAATCCGGGAAACTTTTTGTGGGCGGATATGAGTTCACGATGCTGAAAACCCTATGAAAATG TAATGATAAATTCACCAGTC
Downstream 100 bases:
>100_bases CACATGACAAACGAATTTGAAATACTCAAGCCGGGCAAGCTTCTGCTGGCTTCAGCGAATCTGCTTGACCCCAATTTCAA GCGGACAGTTCTTCTCATGT
Product: bacterioferritin comigratory protein, thiol peroxidase, putative
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MALLQAGQKAPEFTAKDQDGKEVSLRDYTGRKVVLYFYPKDDTPGCTKEACAFRDNLPNFEKVDAVVLGVSVDGQKAHRK FADKYELPFTLLVDDEKKIVEAYGVWGLKKFMGREYMGTNRVTYLIDEQGTIEKVWSKVKPETHTAEVLDWLQQKT
Sequences:
>Translated_156_residues MALLQAGQKAPEFTAKDQDGKEVSLRDYTGRKVVLYFYPKDDTPGCTKEACAFRDNLPNFEKVDAVVLGVSVDGQKAHRK FADKYELPFTLLVDDEKKIVEAYGVWGLKKFMGREYMGTNRVTYLIDEQGTIEKVWSKVKPETHTAEVLDWLQQKT >Mature_155_residues ALLQAGQKAPEFTAKDQDGKEVSLRDYTGRKVVLYFYPKDDTPGCTKEACAFRDNLPNFEKVDAVVLGVSVDGQKAHRKF ADKYELPFTLLVDDEKKIVEAYGVWGLKKFMGREYMGTNRVTYLIDEQGTIEKVWSKVKPETHTAEVLDWLQQKT
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=141, Percent_Identity=38.2978723404255, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI4505591, Length=140, Percent_Identity=33.5714285714286, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI32455266, Length=140, Percent_Identity=33.5714285714286, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI32455264, Length=140, Percent_Identity=33.5714285714286, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788825, Length=154, Percent_Identity=46.1038961038961, Blast_Score=154, Evalue=4e-39, Organism=Caenorhabditis elegans, GI193204376, Length=139, Percent_Identity=33.0935251798561, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32565831, Length=139, Percent_Identity=33.0935251798561, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322180, Length=109, Percent_Identity=37.6146788990826, Blast_Score=80, Evalue=1e-16, Organism=Drosophila melanogaster, GI17738015, Length=144, Percent_Identity=34.0277777777778, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17815; Mature: 17684
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLQAGQKAPEFTAKDQDGKEVSLRDYTGRKVVLYFYPKDDTPGCTKEACAFRDNLPNF CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCH EKVDAVVLGVSVDGQKAHRKFADKYELPFTLLVDDEKKIVEAYGVWGLKKFMGREYMGTN HHEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHHHHHHCCCCCCCC RVTYLIDEQGTIEKVWSKVKPETHTAEVLDWLQQKT CEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ALLQAGQKAPEFTAKDQDGKEVSLRDYTGRKVVLYFYPKDDTPGCTKEACAFRDNLPNF CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCH EKVDAVVLGVSVDGQKAHRKFADKYELPFTLLVDDEKKIVEAYGVWGLKKFMGREYMGTN HHEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCHHHHHHHCCCCCCCC RVTYLIDEQGTIEKVWSKVKPETHTAEVLDWLQQKT CEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]