| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is arsR [C]
Identifier: 21673478
GI number: 21673478
Start: 643420
End: 643809
Strand: Reverse
Name: arsR [C]
Synonym: CT0646
Alternate gene names: 21673478
Gene position: 643809-643420 (Counterclockwise)
Preceding gene: 21673479
Following gene: 21673476
Centisome position: 29.88
GC content: 51.03
Gene sequence:
>390_bases ATGAGCAAATCGATGACGATTACAGAAGAGGAAGTAAAAAAATGGCAATTCAATATGCCGGACGAGATGCTCGACGCTGT ATCAAACCGGTTCAAACTGCTTTCAGAGCCGATGCGGCTTAAAATTTTGCGAGCGCTCTGCGACCGGGAGCACACGGTTC AGGAGATCGTCAAGGAGGTCGGCGCAAGCCAGGCAAACATCTCCAAGCATCTGGCACTCATGCACGACAACGGTGTCGTC AACCGCCGCAAAGAGGGACTCAAGTGCTACTACCGGATTTCGGACGACAGCATCGTCTACGCCTGCTTTCTCATCTCGAA AAGCGTGGTTGAAAACCTTCAGGACCGTTTGAGCTGGATTCAGAAAGTGAACACCAACCTGACAACCTGA
Upstream 100 bases:
>100_bases GTTTTTTGGTTTGATTAATGTGATTTAATAACTATATATCTCAATATTTTTTTCATTCGCACCATTGAATGACGCAAAGA GGCATTAACAGGATTATGAC
Downstream 100 bases:
>100_bases ACAGTTTTGCGCAGATAGAACAGATATCAGGGCGATACTCAATATCGCCCTGTTTTTGTTTCCGCCACTCGCCTGACCCT ATCCACCAGATAATAACGCC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; Transcription Regulator ArsR; ArsR Family Regulatory Protein; ArsR Family Transcriptional Repressor; Transcriptional Regulator TrmB
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSKSMTITEEEVKKWQFNMPDEMLDAVSNRFKLLSEPMRLKILRALCDREHTVQEIVKEVGASQANISKHLALMHDNGVV NRRKEGLKCYYRISDDSIVYACFLISKSVVENLQDRLSWIQKVNTNLTT
Sequences:
>Translated_129_residues MSKSMTITEEEVKKWQFNMPDEMLDAVSNRFKLLSEPMRLKILRALCDREHTVQEIVKEVGASQANISKHLALMHDNGVV NRRKEGLKCYYRISDDSIVYACFLISKSVVENLQDRLSWIQKVNTNLTT >Mature_128_residues SKSMTITEEEVKKWQFNMPDEMLDAVSNRFKLLSEPMRLKILRALCDREHTVQEIVKEVGASQANISKHLALMHDNGVVN RRKEGLKCYYRISDDSIVYACFLISKSVVENLQDRLSWIQKVNTNLTT
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14963; Mature: 14831
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSMTITEEEVKKWQFNMPDEMLDAVSNRFKLLSEPMRLKILRALCDREHTVQEIVKEV CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH GASQANISKHLALMHDNGVVNRRKEGLKCYYRISDDSIVYACFLISKSVVENLQDRLSWI CCCCCHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QKVNTNLTT HHHHCCCCC >Mature Secondary Structure SKSMTITEEEVKKWQFNMPDEMLDAVSNRFKLLSEPMRLKILRALCDREHTVQEIVKEV CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH GASQANISKHLALMHDNGVVNRRKEGLKCYYRISDDSIVYACFLISKSVVENLQDRLSWI CCCCCHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH QKVNTNLTT HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA