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The map label for this gene is ybgF [H]

Identifier: 21673472

GI number: 21673472

Start: 638408

End: 639196

Strand: Direct

Name: ybgF [H]

Synonym: CT0640

Alternate gene names: 21673472

Gene position: 638408-639196 (Clockwise)

Preceding gene: 21673470

Following gene: 21673474

Centisome position: 29.63

GC content: 47.28

Gene sequence:

>789_bases
TTGGTTCCTGCCATTTTTCTTTCTGCATGTGCATCGCAGAAAGATCTGAGCTATGTTCAGGGGGAGGTTTCGCAGCTCAA
GCAGGAGTCAACGGTTATAAAACAGCAGTCTGCGGGTTCCTATTCCGAAATGACCCAGTACCGTGAAGAGATCGCTTCTC
TTAATGGGAAAATCGATGAATTGCAATACGATTATCGGACTTCAAAGAAAAGGCTCGATATGGAGGATTCCCTGCTGGTC
AGAAAGGTCGATGATCTTGAAAACCGGATTGCAAGGATAGAACAATATCTCGGGATTGAGAGTACCGGAAAAGACAAGTC
TTTGGTGCCGAAGGTTTTGCCGCCACCACCGTCATCTTCAATGTCAAGCAATTCTTCTGGAAGTACATCGGCTCAGTCTA
AAGAAGAGGCTTCGGCTGCAACTGGTGAGGCATTACTCAGCGAAGGGTTGATCAAAATGAAGAGGGGAGATTACGCTGGC
GCTCGCGAGAGTTTCAATGCTTTTATGACCGGTAATCCCAAATCGCCGAAAGTTGCCGACGCCCAGTTCTTCTTGGCTGA
GACTTATTACAACGAAAAGTGGTACGAGAAGGCCATCCTTGAATATCAGACCGTGATTGCCAGATATACAAAGAGTCCGA
AACGGCCCGCTGCGCTGTACAAGCAGGGACTTTCATTCGCGAAAATCGGAGATGAGGCCAACGCAAAAGCGCGTTACAAG
GATGTACTCAATCTTTATCCGCAATCTCCTGAGGCGAAACTCGCCCAAAAGAATCTCGATAAGAAGTAA

Upstream 100 bases:

>100_bases
ATCGAATGAGCACTATACCGGAGGCCGGGTTATGCCCAGCCCCCGGTTTTGTTATTCATGAACCAAATATCGATCCATGA
TGAAAACCAGACGTCTTTTG

Downstream 100 bases:

>100_bases
TTGCAGGCACTCTGAAAAGCCCGGACATCACCGGGCGTTTTTTATGGGCAAAAAAAGAGCCACGCTGGTACATGGCTCTT
TTTGAACAGATTTGCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVPAIFLSACASQKDLSYVQGEVSQLKQESTVIKQQSAGSYSEMTQYREEIASLNGKIDELQYDYRTSKKRLDMEDSLLV
RKVDDLENRIARIEQYLGIESTGKDKSLVPKVLPPPPSSSMSSNSSGSTSAQSKEEASAATGEALLSEGLIKMKRGDYAG
ARESFNAFMTGNPKSPKVADAQFFLAETYYNEKWYEKAILEYQTVIARYTKSPKRPAALYKQGLSFAKIGDEANAKARYK
DVLNLYPQSPEAKLAQKNLDKK

Sequences:

>Translated_262_residues
MVPAIFLSACASQKDLSYVQGEVSQLKQESTVIKQQSAGSYSEMTQYREEIASLNGKIDELQYDYRTSKKRLDMEDSLLV
RKVDDLENRIARIEQYLGIESTGKDKSLVPKVLPPPPSSSMSSNSSGSTSAQSKEEASAATGEALLSEGLIKMKRGDYAG
ARESFNAFMTGNPKSPKVADAQFFLAETYYNEKWYEKAILEYQTVIARYTKSPKRPAALYKQGLSFAKIGDEANAKARYK
DVLNLYPQSPEAKLAQKNLDKK
>Mature_262_residues
MVPAIFLSACASQKDLSYVQGEVSQLKQESTVIKQQSAGSYSEMTQYREEIASLNGKIDELQYDYRTSKKRLDMEDSLLV
RKVDDLENRIARIEQYLGIESTGKDKSLVPKVLPPPPSSSMSSNSSGSTSAQSKEEASAATGEALLSEGLIKMKRGDYAG
ARESFNAFMTGNPKSPKVADAQFFLAETYYNEKWYEKAILEYQTVIARYTKSPKRPAALYKQGLSFAKIGDEANAKARYK
DVLNLYPQSPEAKLAQKNLDKK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=242, Percent_Identity=26.8595041322314, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29148; Mature: 29148

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPAIFLSACASQKDLSYVQGEVSQLKQESTVIKQQSAGSYSEMTQYREEIASLNGKIDE
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
LQYDYRTSKKRLDMEDSLLVRKVDDLENRIARIEQYLGIESTGKDKSLVPKVLPPPPSSS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
MSSNSSGSTSAQSKEEASAATGEALLSEGLIKMKRGDYAGARESFNAFMTGNPKSPKVAD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCCCCCH
AQFFLAETYYNEKWYEKAILEYQTVIARYTKSPKRPAALYKQGLSFAKIGDEANAKARYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHCCCCCCCHHHHH
DVLNLYPQSPEAKLAQKNLDKK
HHHHHCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MVPAIFLSACASQKDLSYVQGEVSQLKQESTVIKQQSAGSYSEMTQYREEIASLNGKIDE
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
LQYDYRTSKKRLDMEDSLLVRKVDDLENRIARIEQYLGIESTGKDKSLVPKVLPPPPSSS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
MSSNSSGSTSAQSKEEASAATGEALLSEGLIKMKRGDYAGARESFNAFMTGNPKSPKVAD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCCCCCH
AQFFLAETYYNEKWYEKAILEYQTVIARYTKSPKRPAALYKQGLSFAKIGDEANAKARYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHCCCCCCCHHHHH
DVLNLYPQSPEAKLAQKNLDKK
HHHHHCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]