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The map label for this gene is pal [H]

Identifier: 21673470

GI number: 21673470

Start: 637787

End: 638299

Strand: Direct

Name: pal [H]

Synonym: CT0638

Alternate gene names: 21673470

Gene position: 637787-638299 (Clockwise)

Preceding gene: 21673469

Following gene: 21673472

Centisome position: 29.6

GC content: 50.49

Gene sequence:

>513_bases
ATGAGACGTACGTTAACAGGAATTATCGGTGCGGCCATGATCATTTTGGCAGGCTGTTCTTCAAAAAGTGCAGTATCAAC
AGATGAAACCTCCAGAGCCGGTTATGGATCGGGAATGGGAGGCGGAACTGGAGCAGGAGCAGGAGTGAGTGTGGAAGATA
TCGGCCAAGGGGGCAAGGCCGGTTCAATTATTGGTGATATTTTCTTCGATTTCGACAGTTCGGCACTAAGCTCCGAAGCA
CAGGAACAACTCAATCAGAATGCCGCCTGGATGCAGAAAAACCCTACTTCTGCCGTGATCATTGAGGGACATTGCGATGA
GCGGGGGACCGATGAGTACAACATCGCGCTTGGTGAGCGTCGTGCTGAAGCAGCCAGAATGTATCTGGTTAACCTTGGAG
TAAGCGGAGGCCGTCTTTCTACCGTCAGTTACGGCGAAGAAAAGCCGTTTGACCCCGGTCATAACGAAGAGGCTTGGGCA
AAGAACAGAAGAGACCATTTTGTCGTGAAGTAA

Upstream 100 bases:

>100_bases
TGGGCGCATTTCGTGGAGAAGTAAATTTGCCATGAAGATATGGAGGGCATAAAAGCTTTCCAGTCTTTTTTTATTCCATC
AACACAACGAGAGAATACCC

Downstream 100 bases:

>100_bases
ATCTTCCGATCGAATGAGCACTATACCGGAGGCCGGGTTATGCCCAGCCCCCGGTTTTGTTATTCATGAACCAAATATCG
ATCCATGATGAAAACCAGAC

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRRTLTGIIGAAMIILAGCSSKSAVSTDETSRAGYGSGMGGGTGAGAGVSVEDIGQGGKAGSIIGDIFFDFDSSALSSEA
QEQLNQNAAWMQKNPTSAVIIEGHCDERGTDEYNIALGERRAEAARMYLVNLGVSGGRLSTVSYGEEKPFDPGHNEEAWA
KNRRDHFVVK

Sequences:

>Translated_170_residues
MRRTLTGIIGAAMIILAGCSSKSAVSTDETSRAGYGSGMGGGTGAGAGVSVEDIGQGGKAGSIIGDIFFDFDSSALSSEA
QEQLNQNAAWMQKNPTSAVIIEGHCDERGTDEYNIALGERRAEAARMYLVNLGVSGGRLSTVSYGEEKPFDPGHNEEAWA
KNRRDHFVVK
>Mature_170_residues
MRRTLTGIIGAAMIILAGCSSKSAVSTDETSRAGYGSGMGGGTGAGAGVSVEDIGQGGKAGSIIGDIFFDFDSSALSSEA
QEQLNQNAAWMQKNPTSAVIIEGHCDERGTDEYNIALGERRAEAARMYLVNLGVSGGRLSTVSYGEEKPFDPGHNEEAWA
KNRRDHFVVK

Specific function: Thought to play a role in bacterial envelope integrity. Very strongly associated with the peptidoglycan [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=170, Percent_Identity=40, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17850; Mature: 17850

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2 ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTLTGIIGAAMIILAGCSSKSAVSTDETSRAGYGSGMGGGTGAGAGVSVEDIGQGGKA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
GSIIGDIFFDFDSSALSSEAQEQLNQNAAWMQKNPTSAVIIEGHCDERGTDEYNIALGER
CCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEECHH
RAEAARMYLVNLGVSGGRLSTVSYGEEKPFDPGHNEEAWAKNRRDHFVVK
HHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCEEEC
>Mature Secondary Structure
MRRTLTGIIGAAMIILAGCSSKSAVSTDETSRAGYGSGMGGGTGAGAGVSVEDIGQGGKA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
GSIIGDIFFDFDSSALSSEAQEQLNQNAAWMQKNPTSAVIIEGHCDERGTDEYNIALGER
CCEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEECHH
RAEAARMYLVNLGVSGGRLSTVSYGEEKPFDPGHNEEAWAKNRRDHFVVK
HHHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]