Click here to switch to the map view.

The map label for this gene is ycbC [C]

Identifier: 21673458

GI number: 21673458

Start: 625440

End: 626213

Strand: Reverse

Name: ycbC [C]

Synonym: CT0624

Alternate gene names: 21673458

Gene position: 626213-625440 (Counterclockwise)

Preceding gene: 21673459

Following gene: 21673456

Centisome position: 29.06

GC content: 61.37

Gene sequence:

>774_bases
ATGCTGATCCTGAGTAAACTGCTGCCGCTGCTGGTGCTGCCTCCGGGCATTTGCCTCCTGCTTGCTATTGCGGGCCTGCT
TTTCAAGCGCCGCTCCCTCGTCTGGATTTCCCTCGCGCTGCTTTGGGCGCTGAGCCTGCCAGTCGTCGGCCAGGCGCTGA
TGCATCGGACGGAGGAACCCTGGCATCGCGTGCCGGTCGAGCAGGTGCGGAAAGCCGACGCAATTGTGGTGCTGAGCGGA
ATGCTTCAGCAGATTCATGGTGCGCCTCTCGGCGAATTCGGAGAGGCGGCGGATCGTTTCGAGAGCGGGATTGATCTCTT
CAAGGCGGGCAAAGCTCCGGTTCTCGTCTTTACCGGCGGCCAGATGCCCTGGGATCCTGACTGCGTGCCCGAAGGCGAGC
TTCTAGCTGCACGAGCGCGGTTGCGCGGCGTGCCTGCCGGAAGCATCCGCCTGACCTCGACGGTGGCCAACACCGCTGGA
GAAGCGCTCGCCACGGCCTTGCTCCTCGGCGTGTCACCCGGCAAGCCGAAGCGGATCATTCTGGTGACCAGCGCGTTTCA
TATGCAGCGAGCGCTGATGCTTTTCATGGCGGCGGGCTTCGAGGTCGAACCCTGCCCGGTCGATTTCTGGGCAACCGATC
TGAAGAGCCGGACGACGCTACTCGATTTTATTCCCAGTGCCAATGCCATGAACGACTCGGCGACGGCATTACGCGAAATG
ATCGGTCAAATTGTTTACAGCTCCGGAATGCGATTCATGACATTGGCCAGGTGA

Upstream 100 bases:

>100_bases
AGCGGCGCGGAACAGCGTGATCGCAACGGAGCATTTCGCTTGCTCTTGTTGTCTTTATGGTGACTTGCAGATACCTCATC
ACCCATCAATCAAATACCCC

Downstream 100 bases:

>100_bases
CGCGCCACATGTTTTGCTGCGCCCGCGAGGGTGAGAATTGTCGAGTCGATTGATCGGTCGTTTTTCAAAGTTTTTTATAT
TTGAATCGAAAATTAGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLILSKLLPLLVLPPGICLLLAIAGLLFKRRSLVWISLALLWALSLPVVGQALMHRTEEPWHRVPVEQVRKADAIVVLSG
MLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGGQMPWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAG
EALATALLLGVSPGKPKRIILVTSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREM
IGQIVYSSGMRFMTLAR

Sequences:

>Translated_257_residues
MLILSKLLPLLVLPPGICLLLAIAGLLFKRRSLVWISLALLWALSLPVVGQALMHRTEEPWHRVPVEQVRKADAIVVLSG
MLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGGQMPWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAG
EALATALLLGVSPGKPKRIILVTSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREM
IGQIVYSSGMRFMTLAR
>Mature_257_residues
MLILSKLLPLLVLPPGICLLLAIAGLLFKRRSLVWISLALLWALSLPVVGQALMHRTEEPWHRVPVEQVRKADAIVVLSG
MLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGGQMPWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAG
EALATALLLGVSPGKPKRIILVTSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREM
IGQIVYSSGMRFMTLAR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27777; Mature: 27777

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILSKLLPLLVLPPGICLLLAIAGLLFKRRSLVWISLALLWALSLPVVGQALMHRTEEP
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WHRVPVEQVRKADAIVVLSGMLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGG
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCCEEEEECC
QMPWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAGEALATALLLGVSPGKPKRII
CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LVTSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREM
EEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IGQIVYSSGMRFMTLAR
HHHHHHHCCCCEEEECC
>Mature Secondary Structure
MLILSKLLPLLVLPPGICLLLAIAGLLFKRRSLVWISLALLWALSLPVVGQALMHRTEEP
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WHRVPVEQVRKADAIVVLSGMLQQIHGAPLGEFGEAADRFESGIDLFKAGKAPVLVFTGG
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCCEEEEECC
QMPWDPDCVPEGELLAARARLRGVPAGSIRLTSTVANTAGEALATALLLGVSPGKPKRII
CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LVTSAFHMQRALMLFMAAGFEVEPCPVDFWATDLKSRTTLLDFIPSANAMNDSATALREM
EEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IGQIVYSSGMRFMTLAR
HHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA