Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21673410

Identifier: 21673410

GI number: 21673410

Start: 582144

End: 582992

Strand: Direct

Name: 21673410

Synonym: CT0575

Alternate gene names: NA

Gene position: 582144-582992 (Clockwise)

Preceding gene: 21673409

Following gene: 21673411

Centisome position: 27.01

GC content: 49.0

Gene sequence:

>849_bases
ATGTCAAAAACCGCATTGCTTCCCACGGTAACAGCTGTGCGCATGGTTTGGGCCATGTCGGGCAAGTTTTCCAATGATGC
TCCTTCGCAAACCATGGCTACCTACGTCGAAGATGTGCTGAAGGGTATTGAAGAGCAGGCACCGCAAATTAGCTCTGACG
AACGCAGTTATGTGACGAGCGCCGTCGCCACGATGAAAGCCAGTCTGCGCAGCATCGATGTTATTTCCAAGGGGCGTGAC
CTTAATTTTAAGGAAAACGAGAAGCTGCGTAGCGCTTATCTTGAATCGGTAAAAGAAAGTCTGGATTTTGGAAATAAAGC
CCAGGACTTTCTTAAGTCACTGCCTGCGATGACCATTGCGGGCGCGGGAGGGGTGACGGTGGCGCAATATTTTTTTAAAG
CATCCACTTTCGAGCTTTGGGGATTCGGTCTTATACTCACAGGCATTGGGTATTTTTTCAATCAGTATATAGTGCTCTGG
GTGCGCCGGAAAAAGCAGATGCTTTATGTGACCCAGGATTATGAGCGAGGACTGTACTACGAACAGTACCTTGACCGTGT
ACGCCTGGTTCTGCTTGCTCTTTTTCTTGATCTTGAGCGGATTCACAAGCGGGTATTCAGAGAGAACTATGAGGCGGACA
CCACATCGGTTGCAGTTCAATCGATTATCGACGACATTTTGTCCGGGGTTCGCTCAACTTTTTGCCCGTACGCTTACAAA
CATATGGCTGAGAAAAAAGTGACCCCTGAGTTGTGGACTCTGTGCGAAAGCGGTATTCGCAAGGCAGTGGAGAACTGCCC
ACTGTGGGAAGGGGGACAGCAGAGTGAAAACCGTATCGACAGTTTGTAA

Upstream 100 bases:

>100_bases
CGAACAGGCGAATGGTTCCGATACTCGACATTGACAAAATGGTAGCAATAGGCTTCGTGGTTTGCGTTAAATCAATAAAA
CCAGTTACAAGGAGAATCAT

Downstream 100 bases:

>100_bases
TTATGGCCAAAACCGTTCTTGTTACCGGCGCGTCCGGGTTTATCGGGTCGCATCTGGTGGGGCGGTGCTTGGCGGATGGC
TGTCGCGTGAAGGCGCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSKTALLPTVTAVRMVWAMSGKFSNDAPSQTMATYVEDVLKGIEEQAPQISSDERSYVTSAVATMKASLRSIDVISKGRD
LNFKENEKLRSAYLESVKESLDFGNKAQDFLKSLPAMTIAGAGGVTVAQYFFKASTFELWGFGLILTGIGYFFNQYIVLW
VRRKKQMLYVTQDYERGLYYEQYLDRVRLVLLALFLDLERIHKRVFRENYEADTTSVAVQSIIDDILSGVRSTFCPYAYK
HMAEKKVTPELWTLCESGIRKAVENCPLWEGGQQSENRIDSL

Sequences:

>Translated_282_residues
MSKTALLPTVTAVRMVWAMSGKFSNDAPSQTMATYVEDVLKGIEEQAPQISSDERSYVTSAVATMKASLRSIDVISKGRD
LNFKENEKLRSAYLESVKESLDFGNKAQDFLKSLPAMTIAGAGGVTVAQYFFKASTFELWGFGLILTGIGYFFNQYIVLW
VRRKKQMLYVTQDYERGLYYEQYLDRVRLVLLALFLDLERIHKRVFRENYEADTTSVAVQSIIDDILSGVRSTFCPYAYK
HMAEKKVTPELWTLCESGIRKAVENCPLWEGGQQSENRIDSL
>Mature_281_residues
SKTALLPTVTAVRMVWAMSGKFSNDAPSQTMATYVEDVLKGIEEQAPQISSDERSYVTSAVATMKASLRSIDVISKGRDL
NFKENEKLRSAYLESVKESLDFGNKAQDFLKSLPAMTIAGAGGVTVAQYFFKASTFELWGFGLILTGIGYFFNQYIVLWV
RRKKQMLYVTQDYERGLYYEQYLDRVRLVLLALFLDLERIHKRVFRENYEADTTSVAVQSIIDDILSGVRSTFCPYAYKH
MAEKKVTPELWTLCESGIRKAVENCPLWEGGQQSENRIDSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32042; Mature: 31911

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTALLPTVTAVRMVWAMSGKFSNDAPSQTMATYVEDVLKGIEEQAPQISSDERSYVTS
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AVATMKASLRSIDVISKGRDLNFKENEKLRSAYLESVKESLDFGNKAQDFLKSLPAMTIA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEC
GAGGVTVAQYFFKASTFELWGFGLILTGIGYFFNQYIVLWVRRKKQMLYVTQDYERGLYY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCHH
EQYLDRVRLVLLALFLDLERIHKRVFRENYEADTTSVAVQSIIDDILSGVRSTFCPYAYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HMAEKKVTPELWTLCESGIRKAVENCPLWEGGQQSENRIDSL
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
SKTALLPTVTAVRMVWAMSGKFSNDAPSQTMATYVEDVLKGIEEQAPQISSDERSYVTS
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AVATMKASLRSIDVISKGRDLNFKENEKLRSAYLESVKESLDFGNKAQDFLKSLPAMTIA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEC
GAGGVTVAQYFFKASTFELWGFGLILTGIGYFFNQYIVLWVRRKKQMLYVTQDYERGLYY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCHH
EQYLDRVRLVLLALFLDLERIHKRVFRENYEADTTSVAVQSIIDDILSGVRSTFCPYAYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HMAEKKVTPELWTLCESGIRKAVENCPLWEGGQQSENRIDSL
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA