| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is hisD
Identifier: 21673381
GI number: 21673381
Start: 554334
End: 555620
Strand: Reverse
Name: hisD
Synonym: CT0546
Alternate gene names: 21673381
Gene position: 555620-554334 (Counterclockwise)
Preceding gene: 21673383
Following gene: 21673380
Centisome position: 25.78
GC content: 62.47
Gene sequence:
>1287_bases GTGCTAACGATCTACCATTTCCCCCAGGACGAGGCAGCCCTCAGAGAACAGCTCAACCGGACGGTATCGTTTGATCCCGA TGCCCAGCGGACGGTCGATGACATTCTGTATCGCGTCAGAACGGAGGGCGATGCCGCCGTGCTCGACTATACCGAGCGCT TCCAGGGGATACGGCTCTATGACATGCGGGTGCCGGAAGCGGAGATCGAGGCGGCGTACGCGGCGGCTGATCCGGAGTTC ATCGCCATTCTCGAAGAGGCGTTTGCAAACATCACGGCGTTCCATCGCAACGAGGCGGAGAAAAGCTTTTTCTACGAACA GAAGGGTGGCGTCATCCTCGGCCAGCGCGTCACGCCGATGGAGAAGGCGCTGCTCTACGTGCCCGGCGGCAAAGCCGCCT ACCCCTCGTCGGTGCTGATGAATGCCGCGCCTGCGCAGGTGGCCGGCGTCGATGAAATCTCCATGACCACCCCGTGCGAC GCTGAGGGCAAGGTCAATCCGCACATCCTCGCTGCCGCGAAAGTCGCCGGCATCACCAGCGTCTATCGCCTCGGCGGGGC ACAGGCCGTGGCGGCGTTCGCCTACGGCACGGCGACCATTCCGAAGGTTGACATCGTCACCGGCCCTGGCAATAAATATG TCGCACTCGCCAAGAAGCAGGTGTTCGGCCACGTCGCCATCGACAGTATCGCCGGGCCGTCAGAAGTGGTGGTTATCGCC GACGCAGGCGCGGAGCCGGAATTCATCGTGATGGACATGTTCGCGCAGGCCGAGCACGATCCCGACGCATCAGCGGTGCT CATCACGCCATCCGCCGAGCTGGCCGACGCCGTGCGGGAGACTGCTGCTCGCCTTGCGGGCACGATGCTTCGTGGCGAGG TGATCACTCGCGCGCTCACGGATAACGGCGCGATTGTTGTAACCGGTTCGATGCAGGAAGCGTGCAAGGTGTCTGACATG ATCGCTCCCGAGCACCTCGAACTGCACGTTGACAATCCCTGGGAGATTCTGCCTGACCTGCGTCATGCCGGAGCGATTTT CATGGGGCAGTGGTCGTGCGAAACGGTCGGCGATTATTTTGCCGGACCGAACCACACGCTGCCAACCAACGGCACGGCGC GATTCTTCTCGCCGCTCTCGGTGCGCGACTTCGTCAAACACACCTCGATCATCGCCTGGTCGAAGAGCGAGCTTGCCCGC ACCGGGGAGAAGATCGCCCGCTTCGCCGACCATGAAGGGCTTCAGGCTCACGCCGAGGCGGTTCGCGTCAGACTGAAACA CCTGTAA
Upstream 100 bases:
>100_bases GCGGAGTTTCGTTTCAAAGCGCCAATGCTTACATTACGTGACAAGTGTTCAAAACCCGGCATATCGAAGCCACACTATTA TTATAAAACAGAGAAGCGCA
Downstream 100 bases:
>100_bases CAATGAAGGTCAGCGATTTCGATTACGCCCTTCCCGAAGAGCGCATCGCCTGTTATCCTCCCGCAAAACGCGGTTCGACG AGACTGATTGTGCTCAATCG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MLTIYHFPQDEAALREQLNRTVSFDPDAQRTVDDILYRVRTEGDAAVLDYTERFQGIRLYDMRVPEAEIEAAYAAADPEF IAILEEAFANITAFHRNEAEKSFFYEQKGGVILGQRVTPMEKALLYVPGGKAAYPSSVLMNAAPAQVAGVDEISMTTPCD AEGKVNPHILAAAKVAGITSVYRLGGAQAVAAFAYGTATIPKVDIVTGPGNKYVALAKKQVFGHVAIDSIAGPSEVVVIA DAGAEPEFIVMDMFAQAEHDPDASAVLITPSAELADAVRETAARLAGTMLRGEVITRALTDNGAIVVTGSMQEACKVSDM IAPEHLELHVDNPWEILPDLRHAGAIFMGQWSCETVGDYFAGPNHTLPTNGTARFFSPLSVRDFVKHTSIIAWSKSELAR TGEKIARFADHEGLQAHAEAVRVRLKHL
Sequences:
>Translated_428_residues MLTIYHFPQDEAALREQLNRTVSFDPDAQRTVDDILYRVRTEGDAAVLDYTERFQGIRLYDMRVPEAEIEAAYAAADPEF IAILEEAFANITAFHRNEAEKSFFYEQKGGVILGQRVTPMEKALLYVPGGKAAYPSSVLMNAAPAQVAGVDEISMTTPCD AEGKVNPHILAAAKVAGITSVYRLGGAQAVAAFAYGTATIPKVDIVTGPGNKYVALAKKQVFGHVAIDSIAGPSEVVVIA DAGAEPEFIVMDMFAQAEHDPDASAVLITPSAELADAVRETAARLAGTMLRGEVITRALTDNGAIVVTGSMQEACKVSDM IAPEHLELHVDNPWEILPDLRHAGAIFMGQWSCETVGDYFAGPNHTLPTNGTARFFSPLSVRDFVKHTSIIAWSKSELAR TGEKIARFADHEGLQAHAEAVRVRLKHL >Mature_428_residues MLTIYHFPQDEAALREQLNRTVSFDPDAQRTVDDILYRVRTEGDAAVLDYTERFQGIRLYDMRVPEAEIEAAYAAADPEF IAILEEAFANITAFHRNEAEKSFFYEQKGGVILGQRVTPMEKALLYVPGGKAAYPSSVLMNAAPAQVAGVDEISMTTPCD AEGKVNPHILAAAKVAGITSVYRLGGAQAVAAFAYGTATIPKVDIVTGPGNKYVALAKKQVFGHVAIDSIAGPSEVVVIA DAGAEPEFIVMDMFAQAEHDPDASAVLITPSAELADAVRETAARLAGTMLRGEVITRALTDNGAIVVTGSMQEACKVSDM IAPEHLELHVDNPWEILPDLRHAGAIFMGQWSCETVGDYFAGPNHTLPTNGTARFFSPLSVRDFVKHTSIIAWSKSELAR TGEKIARFADHEGLQAHAEAVRVRLKHL
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=418, Percent_Identity=37.3205741626794, Blast_Score=270, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6319819, Length=431, Percent_Identity=34.8027842227378, Blast_Score=246, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_CHLTE (Q8KEY6)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661446.1 - ProteinModelPortal: Q8KEY6 - SMR: Q8KEY6 - GeneID: 1006212 - GenomeReviews: AE006470_GR - KEGG: cte:CT0546 - NMPDR: fig|194439.1.peg.540 - TIGR: CT0546 - HOGENOM: HBG329596 - OMA: IEAFHRQ - ProtClustDB: PRK00877 - BioCyc: CTEP194439:CT_0546-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46264; Mature: 46264
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 324-324 ACT_SITE 325-325 BINDING 126-126 BINDING 188-188 BINDING 211-211 BINDING 234-234 BINDING 256-256 BINDING 259-259 BINDING 325-325 BINDING 358-358 BINDING 412-412 BINDING 417-417
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIYHFPQDEAALREQLNRTVSFDPDAQRTVDDILYRVRTEGDAAVLDYTERFQGIRLY CEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCEEEE DMRVPEAEIEAAYAAADPEFIAILEEAFANITAFHRNEAEKSFFYEQKGGVILGQRVTPM EEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCEEEECCCCCH EKALLYVPGGKAAYPSSVLMNAAPAQVAGVDEISMTTPCDAEGKVNPHILAAAKVAGITS HHEEEECCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH VYRLGGAQAVAAFAYGTATIPKVDIVTGPGNKYVALAKKQVFGHVAIDSIAGPSEVVVIA HHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEHHHHHCEEEECCCCCCCEEEEEE DAGAEPEFIVMDMFAQAEHDPDASAVLITPSAELADAVRETAARLAGTMLRGEVITRALT ECCCCCCEEEEEHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC DNGAIVVTGSMQEACKVSDMIAPEHLELHVDNPWEILPDLRHAGAIFMGQWSCETVGDYF CCCEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHC AGPNHTLPTNGTARFFSPLSVRDFVKHTSIIAWSKSELARTGEKIARFADHEGLQAHAEA CCCCCCCCCCCCHHHCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHH VRVRLKHL HHHHHHCC >Mature Secondary Structure MLTIYHFPQDEAALREQLNRTVSFDPDAQRTVDDILYRVRTEGDAAVLDYTERFQGIRLY CEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCEEEE DMRVPEAEIEAAYAAADPEFIAILEEAFANITAFHRNEAEKSFFYEQKGGVILGQRVTPM EEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCEEEECCCCCH EKALLYVPGGKAAYPSSVLMNAAPAQVAGVDEISMTTPCDAEGKVNPHILAAAKVAGITS HHEEEECCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH VYRLGGAQAVAAFAYGTATIPKVDIVTGPGNKYVALAKKQVFGHVAIDSIAGPSEVVVIA HHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEHHHHHCEEEECCCCCCCEEEEEE DAGAEPEFIVMDMFAQAEHDPDASAVLITPSAELADAVRETAARLAGTMLRGEVITRALT ECCCCCCEEEEEHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC DNGAIVVTGSMQEACKVSDMIAPEHLELHVDNPWEILPDLRHAGAIFMGQWSCETVGDYF CCCEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHC AGPNHTLPTNGTARFFSPLSVRDFVKHTSIIAWSKSELARTGEKIARFADHEGLQAHAEA CCCCCCCCCCCCHHHCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHH VRVRLKHL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901