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The map label for this gene is ypjH [H]

Identifier: 21673383

GI number: 21673383

Start: 556913

End: 558076

Strand: Reverse

Name: ypjH [H]

Synonym: CT0548

Alternate gene names: 21673383

Gene position: 558076-556913 (Counterclockwise)

Preceding gene: 21673385

Following gene: 21673381

Centisome position: 25.9

GC content: 59.62

Gene sequence:

>1164_bases
TTGTTTTGCAAGGTCATGAAAATCGGAATCTCCTGTCATCATACGTACGGCGGAAGCGGGGCGGTGGCTACCGAGCTGGG
GAAAGCGCTGGCAATGAAGGGCCACACCGTGCATTTTTTCAGCCAGGCGGCTCCGTTCAGGCTTGGGCTTTATTCGCGGA
ACATCTATTGCCATGAGATCGAGGCGATGAACTATCCGCTGTTCGAAACGCCGTACCACTCACTGGCGCTGGCATCGAAG
ATTGCCGAGGTGGCGTTTTATGAAAAGCTCGACGTCGTGCACGCCCACTACGCCATTCCCCACGCCATCAGCGCCATGCT
GGCCCGGCAAATGCTCGAAGAGAAGTGCCCCGCGGCGGAGTGTTTCCGCATCGTCACAACGCTGCACGGTACCGACATCA
CCATCGTTGGTGCCGACCGGAGCATGAGCGACGCGGTGCGACTCGCCATCAACAAGTCGGACGGCGTAACGGCGGTGTCA
GGCTACTTGCGCGACGAGACCATTCGCATGTTCACACCGCGCAAAAAGATCGAGGTGATTCACAACTTTGTCGATACCGC
CGTGTTCAAGCGCCTGCCCGGACGGCGGGATTTGCTTGGGCTGGATGGCGGCAAGGTAGTGATTCACATCTCGAACTTCC
GGCCGGTCAAGCGCATCATGGATGTGCTGGCGGTGTTCGAAAGCATCCGGCGCGAGATTCCGGCCACCCTGCTGCTGGTG
GGTGACGGGCCGGATCGCAGCGAGGCGGAGACCTGGGTGCGGAATTACGGCATCGGAGACAGGGTGCGCTTTCTCGGCAA
GCTCGATGACATCGTACCGCTGCTGTCTATCGCCGACCTGATGCTGATGCCAAGCAACGTCGAATCGTTTGGCCTCGCCG
CACTCGAAGCAATGGCCTGCGGCGTGCCTGTTGTGGTGACCGATGCCGGCGGTTTTCCGGAATTCGTGCGGCAAGGAGTG
GACGGCTTCCGCCATCCGCATGGCGACATCGAGGGAATGAGCCGGAGTGCGCTTTCGATTTTACGGGACGACGAAGTCTG
GCAGCGCTTTTCAGGGGCTGCTGCAAACCAGGCAGGGCGGTTCAAAACCGCCCTGAAGGTCAAAGAATACGAAGCGTTTT
ACCGCAGGCTGATCGACGAGGCTCGCGAGCGCAAAGCTCAGTAG

Upstream 100 bases:

>100_bases
ACGGGAAAGATGAGATGATAGCAGCTCTGTACCCGCTTGATGTTGATCTTCAACTCTCCGCCGATTTTCGTACTTTTCAA
GCATAACATGTTGATCTAAC

Downstream 100 bases:

>100_bases
CGTTTGGTCGAAAGCAGCACCGAGCGGTATTTCTCGAGATCTTCGAGCACTGCTCCGGTGCCGCGCGCGACGGCGGTGAG
CGGGTCTTCGCTGATATGCA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFCKVMKIGISCHHTYGGSGAVATELGKALAMKGHTVHFFSQAAPFRLGLYSRNIYCHEIEAMNYPLFETPYHSLALASK
IAEVAFYEKLDVVHAHYAIPHAISAMLARQMLEEKCPAAECFRIVTTLHGTDITIVGADRSMSDAVRLAINKSDGVTAVS
GYLRDETIRMFTPRKKIEVIHNFVDTAVFKRLPGRRDLLGLDGGKVVIHISNFRPVKRIMDVLAVFESIRREIPATLLLV
GDGPDRSEAETWVRNYGIGDRVRFLGKLDDIVPLLSIADLMLMPSNVESFGLAALEAMACGVPVVVTDAGGFPEFVRQGV
DGFRHPHGDIEGMSRSALSILRDDEVWQRFSGAAANQAGRFKTALKVKEYEAFYRRLIDEARERKAQ

Sequences:

>Translated_387_residues
MFCKVMKIGISCHHTYGGSGAVATELGKALAMKGHTVHFFSQAAPFRLGLYSRNIYCHEIEAMNYPLFETPYHSLALASK
IAEVAFYEKLDVVHAHYAIPHAISAMLARQMLEEKCPAAECFRIVTTLHGTDITIVGADRSMSDAVRLAINKSDGVTAVS
GYLRDETIRMFTPRKKIEVIHNFVDTAVFKRLPGRRDLLGLDGGKVVIHISNFRPVKRIMDVLAVFESIRREIPATLLLV
GDGPDRSEAETWVRNYGIGDRVRFLGKLDDIVPLLSIADLMLMPSNVESFGLAALEAMACGVPVVVTDAGGFPEFVRQGV
DGFRHPHGDIEGMSRSALSILRDDEVWQRFSGAAANQAGRFKTALKVKEYEAFYRRLIDEARERKAQ
>Mature_387_residues
MFCKVMKIGISCHHTYGGSGAVATELGKALAMKGHTVHFFSQAAPFRLGLYSRNIYCHEIEAMNYPLFETPYHSLALASK
IAEVAFYEKLDVVHAHYAIPHAISAMLARQMLEEKCPAAECFRIVTTLHGTDITIVGADRSMSDAVRLAINKSDGVTAVS
GYLRDETIRMFTPRKKIEVIHNFVDTAVFKRLPGRRDLLGLDGGKVVIHISNFRPVKRIMDVLAVFESIRREIPATLLLV
GDGPDRSEAETWVRNYGIGDRVRFLGKLDDIVPLLSIADLMLMPSNVESFGLAALEAMACGVPVVVTDAGGFPEFVRQGV
DGFRHPHGDIEGMSRSALSILRDDEVWQRFSGAAANQAGRFKTALKVKEYEAFYRRLIDEARERKAQ

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=314, Percent_Identity=25.1592356687898, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1788357, Length=290, Percent_Identity=23.448275862069, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42943; Mature: 42943

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCKVMKIGISCHHTYGGSGAVATELGKALAMKGHTVHFFSQAAPFRLGLYSRNIYCHEI
CCCEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCEEEEEE
EAMNYPLFETPYHSLALASKIAEVAFYEKLDVVHAHYAIPHAISAMLARQMLEEKCPAAE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CFRIVTTLHGTDITIVGADRSMSDAVRLAINKSDGVTAVSGYLRDETIRMFTPRKKIEVI
HHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCHHHHHHH
HNFVDTAVFKRLPGRRDLLGLDGGKVVIHISNFRPVKRIMDVLAVFESIRREIPATLLLV
HHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
GDGPDRSEAETWVRNYGIGDRVRFLGKLDDIVPLLSIADLMLMPSNVESFGLAALEAMAC
ECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GVPVVVTDAGGFPEFVRQGVDGFRHPHGDIEGMSRSALSILRDDEVWQRFSGAAANQAGR
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
FKTALKVKEYEAFYRRLIDEARERKAQ
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFCKVMKIGISCHHTYGGSGAVATELGKALAMKGHTVHFFSQAAPFRLGLYSRNIYCHEI
CCCEEEEECCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCEEEEEE
EAMNYPLFETPYHSLALASKIAEVAFYEKLDVVHAHYAIPHAISAMLARQMLEEKCPAAE
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
CFRIVTTLHGTDITIVGADRSMSDAVRLAINKSDGVTAVSGYLRDETIRMFTPRKKIEVI
HHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCHHHHHHH
HNFVDTAVFKRLPGRRDLLGLDGGKVVIHISNFRPVKRIMDVLAVFESIRREIPATLLLV
HHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEE
GDGPDRSEAETWVRNYGIGDRVRFLGKLDDIVPLLSIADLMLMPSNVESFGLAALEAMAC
ECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GVPVVVTDAGGFPEFVRQGVDGFRHPHGDIEGMSRSALSILRDDEVWQRFSGAAANQAGR
CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
FKTALKVKEYEAFYRRLIDEARERKAQ
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]