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The map label for this gene is rrf2 [H]

Identifier: 21673360

GI number: 21673360

Start: 532364

End: 532774

Strand: Direct

Name: rrf2 [H]

Synonym: CT0525

Alternate gene names: 21673360

Gene position: 532364-532774 (Clockwise)

Preceding gene: 21673358

Following gene: 21673361

Centisome position: 24.7

GC content: 55.72

Gene sequence:

>411_bases
ATGCTTCAGGTATCCAGAAAGTTTGAATACGGCCTGCACGCCGTCACCTATCTCGCCATGAAAGGCCCGGAGCAGGTTGT
GACGGTCAAGGAGCTGGCCGCTGAAATCGGCTTTTCCCAGGTTTTTCTTGCCAAGGCGATGCAGAGCCTGAACAAGGCGG
GCATCACCAGGTCGGTGCAGGGGGTCAAGGGCGGTTACACACTTGCCAGACCTGCCGAGCAGATTACCGTGGCAGACATC
GGCGTGGCCATCGAAGGCGAGCCACACCTCATGCGCTGCTCTCAGGAGAATTGCCAGTGCGAGATCGAATCGAACTGCAC
GCACAAAGGTTACATGCTCAATCTCCAGAAAAGAATCTATGACCTTCTGGCCGAAACGACCGTGGCTGTGTTGCTTGAGA
GGTACCTTTGA

Upstream 100 bases:

>100_bases
CATAAAATATATCGGCAGCCCGAAAGAATAAAGGTAGATCGGGAATTTCCTGAAACAGGTGCGGGTTTATCCTGTTTTGC
CATCACTCTTTTTTTTGTTT

Downstream 100 bases:

>100_bases
AAATTCAGTAATCGCGCAATTTTTCAGCTTTCTGTTCCGCCAAACCGGGATTGTTTTGTTTATTGCTTGACAGCCGCGAG
TATTGCCGGTGTTCGGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLQVSRKFEYGLHAVTYLAMKGPEQVVTVKELAAEIGFSQVFLAKAMQSLNKAGITRSVQGVKGGYTLARPAEQITVADI
GVAIEGEPHLMRCSQENCQCEIESNCTHKGYMLNLQKRIYDLLAETTVAVLLERYL

Sequences:

>Translated_136_residues
MLQVSRKFEYGLHAVTYLAMKGPEQVVTVKELAAEIGFSQVFLAKAMQSLNKAGITRSVQGVKGGYTLARPAEQITVADI
GVAIEGEPHLMRCSQENCQCEIESNCTHKGYMLNLQKRIYDLLAETTVAVLLERYL
>Mature_136_residues
MLQVSRKFEYGLHAVTYLAMKGPEQVVTVKELAAEIGFSQVFLAKAMQSLNKAGITRSVQGVKGGYTLARPAEQITVADI
GVAIEGEPHLMRCSQENCQCEIESNCTHKGYMLNLQKRIYDLLAETTVAVLLERYL

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15067; Mature: 15067

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQVSRKFEYGLHAVTYLAMKGPEQVVTVKELAAEIGFSQVFLAKAMQSLNKAGITRSVQ
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GVKGGYTLARPAEQITVADIGVAIEGEPHLMRCSQENCQCEIESNCTHKGYMLNLQKRIY
CCCCCEEECCCCHHEEEEHEEEEECCCCCEEECCCCCCEEEECCCCCCCCCEEHHHHHHH
DLLAETTVAVLLERYL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLQVSRKFEYGLHAVTYLAMKGPEQVVTVKELAAEIGFSQVFLAKAMQSLNKAGITRSVQ
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GVKGGYTLARPAEQITVADIGVAIEGEPHLMRCSQENCQCEIESNCTHKGYMLNLQKRIY
CCCCCEEECCCCHHEEEEHEEEEECCCCCEEECCCCCCEEEECCCCCCCCCEEHHHHHHH
DLLAETTVAVLLERYL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]