| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673292
Identifier: 21673292
GI number: 21673292
Start: 475511
End: 477049
Strand: Direct
Name: 21673292
Synonym: CT0456
Alternate gene names: NA
Gene position: 475511-477049 (Clockwise)
Preceding gene: 21673291
Following gene: 21673293
Centisome position: 22.07
GC content: 61.66
Gene sequence:
>1539_bases ATGCTCGAACAGATCAGGAATACCCATCCGCTTGTTTATCAAAACTTTAGCGCTCTGCCGGATGGTGAGAAGCACTTGCG CTCGATTCTCGCTATCGACCGCTACTGGGAGAAGCTCGATCTTCCGGTACCCGACGTGATTCTTGCCGGCTCGCGACTTC CAGTTGACGCCTGCGTCGAGGAGGCGTGCGATATTCTCTACGCTGGAGGCACGCTCGGCCTTTTGCACGCGGCGGTGATG TCGAAAAAGTACGGGCGCAAGGTACTGGTGATCGACCGGGCCGAGCCGGGGCGCACCACGCGGGACTGGAATATCTCGCG TGGCGAGCTGCTGCGCCTCGCCGACACCGGAGTGTTCACCAGCGAAGAGCTGGACTCGACCATCGTTCGAATGTACAAAA CCGGCTGGGTGGAGTTCCACGCGCCCGCCGAAAGGCGCAAGCGGCTCTATATGGACGAAGTGCTCGACTGTGCGGTCGAT GCCGACAGGCTGCTTGGCATGGCTTGCAAAAAGGTGCTCGCGGGTGGTGGTTCAAAGGTGCTTGGCCACACCAGCTTCGT TTGCTGCTACCAGTTCCCGGATCACCTCGTTGTGCAGGTCGAGGAGTTGTCCGGCAAGCCTCGCTACTTCCGGACGCAGG TGCTTGTGGATGCGATGGGCATTGTTTCGCCGGTGGCGATGCAGCTCAACCGGGGCCGCCCGCAAACGCACGTCTGCCCG ACGGTCGGCACCATCGCGAGTGGGTTCGAGAACGCCGATTTCGAGGTGGGCGAAATTCTCGCCAGCACCGAGGACGCGGA GGTCTCCGGCAAACGCGGGCGGCAGCTCATCTGGGAGGGGTTCCCGGCGAAGGGCGACGAGTACATCACCTACCTCTTCT TTTACGACAAGGTCGATTCGCCGAATGACAAGTCGTTGCTCGGCCTTTTCGAGGCGTACTTCCGCAAGCTGCCGGAGTAC AAAAAGCCGGGGCCGAATTTCACGATTCACCGGCCCGTTTTCGGCATCATCCCGGCGTACTTTCACGACGGCGCGGGATG TACGCGCGTGGTCTCCGGCGAGCGCATCGCGCTGCTCGGCGACGCGGCCTCGCTCGCCTCGCCGCTCACCTTCTGCGGCT TCGGCTCGGTGGTGCGCAACCTCGACCGCATGACCTCCGGTCTCGACCGCGCCATGCGCGAAGGCCGACTCGGCGCGGCT GAGCTGGCTAACATAAGCGCTTACGAGCCGAACGTGGCCTCGATGGCAACTCTCATGAAGTACATGTGCTACGACCCGGA GACCGACGAGCCCGGCTTCGTCAACGAGATGATGAACGAGGTGATGATTGTGCTCGACGAGCTGCCGCAGCGCTACCGGC AGGCGATGTTCCGCGACGAGATGAAGGTCGAGGAGCTGGTGACGGTGATGCTCAAGGTGGCGTGGCGCTACCCCAAAATC CTCAAGGCGACCTGGAACAAACTCGGCGTGGGCGGGTCGGTCGGCTTCGTGAAAAACCTTGCCGGATGGGCAATATCGCA GAACGAAAAACGCGGTTAA
Upstream 100 bases:
>100_bases AATCGTGCGGGTCGCCGCATTCACCTCGTTGACGGCAAGATCGAGAGCGATTCGCGCACACCCCGGCAAGCAACCGCCTG AAACCACGGAGAACCGATCC
Downstream 100 bases:
>100_bases CATCGATGGATAAAGCGAAAGCACAACAGGAAATCGGCAAGCTTCGCGCGGAGATCGAACGCCACAATCGCCTCTACTAC CTCGAAGCCAAACCGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MLEQIRNTHPLVYQNFSALPDGEKHLRSILAIDRYWEKLDLPVPDVILAGSRLPVDACVEEACDILYAGGTLGLLHAAVM SKKYGRKVLVIDRAEPGRTTRDWNISRGELLRLADTGVFTSEELDSTIVRMYKTGWVEFHAPAERRKRLYMDEVLDCAVD ADRLLGMACKKVLAGGGSKVLGHTSFVCCYQFPDHLVVQVEELSGKPRYFRTQVLVDAMGIVSPVAMQLNRGRPQTHVCP TVGTIASGFENADFEVGEILASTEDAEVSGKRGRQLIWEGFPAKGDEYITYLFFYDKVDSPNDKSLLGLFEAYFRKLPEY KKPGPNFTIHRPVFGIIPAYFHDGAGCTRVVSGERIALLGDAASLASPLTFCGFGSVVRNLDRMTSGLDRAMREGRLGAA ELANISAYEPNVASMATLMKYMCYDPETDEPGFVNEMMNEVMIVLDELPQRYRQAMFRDEMKVEELVTVMLKVAWRYPKI LKATWNKLGVGGSVGFVKNLAGWAISQNEKRG
Sequences:
>Translated_512_residues MLEQIRNTHPLVYQNFSALPDGEKHLRSILAIDRYWEKLDLPVPDVILAGSRLPVDACVEEACDILYAGGTLGLLHAAVM SKKYGRKVLVIDRAEPGRTTRDWNISRGELLRLADTGVFTSEELDSTIVRMYKTGWVEFHAPAERRKRLYMDEVLDCAVD ADRLLGMACKKVLAGGGSKVLGHTSFVCCYQFPDHLVVQVEELSGKPRYFRTQVLVDAMGIVSPVAMQLNRGRPQTHVCP TVGTIASGFENADFEVGEILASTEDAEVSGKRGRQLIWEGFPAKGDEYITYLFFYDKVDSPNDKSLLGLFEAYFRKLPEY KKPGPNFTIHRPVFGIIPAYFHDGAGCTRVVSGERIALLGDAASLASPLTFCGFGSVVRNLDRMTSGLDRAMREGRLGAA ELANISAYEPNVASMATLMKYMCYDPETDEPGFVNEMMNEVMIVLDELPQRYRQAMFRDEMKVEELVTVMLKVAWRYPKI LKATWNKLGVGGSVGFVKNLAGWAISQNEKRG >Mature_512_residues MLEQIRNTHPLVYQNFSALPDGEKHLRSILAIDRYWEKLDLPVPDVILAGSRLPVDACVEEACDILYAGGTLGLLHAAVM SKKYGRKVLVIDRAEPGRTTRDWNISRGELLRLADTGVFTSEELDSTIVRMYKTGWVEFHAPAERRKRLYMDEVLDCAVD ADRLLGMACKKVLAGGGSKVLGHTSFVCCYQFPDHLVVQVEELSGKPRYFRTQVLVDAMGIVSPVAMQLNRGRPQTHVCP TVGTIASGFENADFEVGEILASTEDAEVSGKRGRQLIWEGFPAKGDEYITYLFFYDKVDSPNDKSLLGLFEAYFRKLPEY KKPGPNFTIHRPVFGIIPAYFHDGAGCTRVVSGERIALLGDAASLASPLTFCGFGSVVRNLDRMTSGLDRAMREGRLGAA ELANISAYEPNVASMATLMKYMCYDPETDEPGFVNEMMNEVMIVLDELPQRYRQAMFRDEMKVEELVTVMLKVAWRYPKI LKATWNKLGVGGSVGFVKNLAGWAISQNEKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57096; Mature: 57096
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQIRNTHPLVYQNFSALPDGEKHLRSILAIDRYWEKLDLPVPDVILAGSRLPVDACVE CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHH EACDILYAGGTLGLLHAAVMSKKYGRKVLVIDRAEPGRTTRDWNISRGELLRLADTGVFT HHHHEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCC SEELDSTIVRMYKTGWVEFHAPAERRKRLYMDEVLDCAVDADRLLGMACKKVLAGGGSKV HHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEE LGHTSFVCCYQFPDHLVVQVEELSGKPRYFRTQVLVDAMGIVSPVAMQLNRGRPQTHVCP ECCCEEEEEEECCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TVGTIASGFENADFEVGEILASTEDAEVSGKRGRQLIWEGFPAKGDEYITYLFFYDKVDS CHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCC PNDKSLLGLFEAYFRKLPEYKKPGPNFTIHRPVFGIIPAYFHDGAGCTRVVSGERIALLG CCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEECCCEEEEEE DAASLASPLTFCGFGSVVRNLDRMTSGLDRAMREGRLGAAELANISAYEPNVASMATLMK CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHH YMCYDPETDEPGFVNEMMNEVMIVLDELPQRYRQAMFRDEMKVEELVTVMLKVAWRYPKI HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LKATWNKLGVGGSVGFVKNLAGWAISQNEKRG HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLEQIRNTHPLVYQNFSALPDGEKHLRSILAIDRYWEKLDLPVPDVILAGSRLPVDACVE CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHH EACDILYAGGTLGLLHAAVMSKKYGRKVLVIDRAEPGRTTRDWNISRGELLRLADTGVFT HHHHEEECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCC SEELDSTIVRMYKTGWVEFHAPAERRKRLYMDEVLDCAVDADRLLGMACKKVLAGGGSKV HHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEE LGHTSFVCCYQFPDHLVVQVEELSGKPRYFRTQVLVDAMGIVSPVAMQLNRGRPQTHVCP ECCCEEEEEEECCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TVGTIASGFENADFEVGEILASTEDAEVSGKRGRQLIWEGFPAKGDEYITYLFFYDKVDS CHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCC PNDKSLLGLFEAYFRKLPEYKKPGPNFTIHRPVFGIIPAYFHDGAGCTRVVSGERIALLG CCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEECCCEEEEEE DAASLASPLTFCGFGSVVRNLDRMTSGLDRAMREGRLGAAELANISAYEPNVASMATLMK CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHH YMCYDPETDEPGFVNEMMNEVMIVLDELPQRYRQAMFRDEMKVEELVTVMLKVAWRYPKI HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LKATWNKLGVGGSVGFVKNLAGWAISQNEKRG HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA