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The map label for this gene is tnpA [H]

Identifier: 21673283

GI number: 21673283

Start: 468267

End: 469493

Strand: Reverse

Name: tnpA [H]

Synonym: CT0446

Alternate gene names: 21673283

Gene position: 469493-468267 (Counterclockwise)

Preceding gene: 21673284

Following gene: 21673281

Centisome position: 21.79

GC content: 54.77

Gene sequence:

>1227_bases
ATGCAGAGCCTGTCAAGCCATTACCACCAACTGTTAGGTCTTCCCTCAAACTGGGAAGTCGAGAACGTCAACTTGTCGAT
GAGTAGCCGGCAAGTGGAGATCAGACTGGCCTTTACCGGCAAGCAGGGCGAGTGTCCAATCTGCGGCCAATCATGCCTCA
TCTATGACCATGCCGCTGAGCAGCGGTGGCGTCATCTTGATACGATGCAGTTCGAGACGATCCTGGTGGCCCGTTTGCCT
CGTTGCCAATGCAAGGAGCATGGAGTCAAAACCGTTCAGGCGCCATGGGCGGCACGGCATTCTCGTTTCACGTTGCTGTT
CGAGAGCTTCGCCGTCGAGCTGTTGTTGCACTGTGCCAATATCAAGGCGGCGTCGCGCCTGTTGCGCTTGAACTGGCATA
CCGTCAATCAAATCATGCGACGCGCCGTTCAGCGAGGATTGGTTCGCCGGAAAACCGAAACCGTCGAGTATCTGGGCATC
GATGAAAAAAGCTTCAAGGCGGGCCAGCATGACGTCACAACGCTGACTGATCTCGGCGAAAGGCGCGTGCTTGAGGTGGT
CGAGCATCGCACGACCGAGGCGACCAAAGAGCTGCTTGCATCGCTGAACGACAGCCAGCAAGCAGGGGTCAAGGCGGTCT
CGGTCGATATGTGGAAACCCTTTATCCATGCCGTTCAAGAGCTGTTGCCGAAGGCCGATCTGGTGCATGATCGCTTTCAT
ATCAGCAAGTATCTCAATGAGGCTGTCGATCTGGTGCGTCGCAAGGAGTGTCGCCAACTCGACAAGGCCGGAGACAAACG
CCTGATCGGCTCAACATATGTCTGGCTGCGTAATCCGGAAAACATGGGTGAGCAGCAACAGGCCGAGCTGGGCAAGCTGA
TGGACGCGGAGTTCAGAACCGGGAAGGCGTGGTCGTTGAAAAATATGTTTCGAGCCTTCTGGCAGCTTGGTTGCGCTGAT
GCCGGGACGTTTTTTTTCGAGTACTGGTCGAAGCGGATCGATGAGGTTGGTCTGGTTCCGTTGACGAAGGTCAAAGAGCT
GCTTCAGCGCCATTTCGGCAACGTCTTGACCTGGTTCAAACACCCGATCACCAACGCAGTTTCCGAAGGCTTGAACAGCA
AGATTCAGATCGTCAAGGCCTCTGCAAGAGGGTTTCACCGGTTCGAGAGTTACCGAATCCGGATTTTGTTTTACTGCGGA
AAACTCAACATGGCTATCGGATCATGA

Upstream 100 bases:

>100_bases
TATTTTCGGCTCTTCGCAGAATATCGTGGAAAGATGTGGCTGTAATGGGTAACTTGGCGTAGTCGTGCAATTCAAGCAAG
CTAACCACATTGATCCGCCC

Downstream 100 bases:

>100_bases
CGTAACCCAGCGCTCCTTTACCCACGATATTCTGCGAAGAACCCTATTTTCATTTCTCGCTATTTGTCCCGGGCTCTTCT
TTCGACCTCACTACTTTGTA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MQSLSSHYHQLLGLPSNWEVENVNLSMSSRQVEIRLAFTGKQGECPICGQSCLIYDHAAEQRWRHLDTMQFETILVARLP
RCQCKEHGVKTVQAPWAARHSRFTLLFESFAVELLLHCANIKAASRLLRLNWHTVNQIMRRAVQRGLVRRKTETVEYLGI
DEKSFKAGQHDVTTLTDLGERRVLEVVEHRTTEATKELLASLNDSQQAGVKAVSVDMWKPFIHAVQELLPKADLVHDRFH
ISKYLNEAVDLVRRKECRQLDKAGDKRLIGSTYVWLRNPENMGEQQQAELGKLMDAEFRTGKAWSLKNMFRAFWQLGCAD
AGTFFFEYWSKRIDEVGLVPLTKVKELLQRHFGNVLTWFKHPITNAVSEGLNSKIQIVKASARGFHRFESYRIRILFYCG
KLNMAIGS

Sequences:

>Translated_408_residues
MQSLSSHYHQLLGLPSNWEVENVNLSMSSRQVEIRLAFTGKQGECPICGQSCLIYDHAAEQRWRHLDTMQFETILVARLP
RCQCKEHGVKTVQAPWAARHSRFTLLFESFAVELLLHCANIKAASRLLRLNWHTVNQIMRRAVQRGLVRRKTETVEYLGI
DEKSFKAGQHDVTTLTDLGERRVLEVVEHRTTEATKELLASLNDSQQAGVKAVSVDMWKPFIHAVQELLPKADLVHDRFH
ISKYLNEAVDLVRRKECRQLDKAGDKRLIGSTYVWLRNPENMGEQQQAELGKLMDAEFRTGKAWSLKNMFRAFWQLGCAD
AGTFFFEYWSKRIDEVGLVPLTKVKELLQRHFGNVLTWFKHPITNAVSEGLNSKIQIVKASARGFHRFESYRIRILFYCG
KLNMAIGS
>Mature_408_residues
MQSLSSHYHQLLGLPSNWEVENVNLSMSSRQVEIRLAFTGKQGECPICGQSCLIYDHAAEQRWRHLDTMQFETILVARLP
RCQCKEHGVKTVQAPWAARHSRFTLLFESFAVELLLHCANIKAASRLLRLNWHTVNQIMRRAVQRGLVRRKTETVEYLGI
DEKSFKAGQHDVTTLTDLGERRVLEVVEHRTTEATKELLASLNDSQQAGVKAVSVDMWKPFIHAVQELLPKADLVHDRFH
ISKYLNEAVDLVRRKECRQLDKAGDKRLIGSTYVWLRNPENMGEQQQAELGKLMDAEFRTGKAWSLKNMFRAFWQLGCAD
AGTFFFEYWSKRIDEVGLVPLTKVKELLQRHFGNVLTWFKHPITNAVSEGLNSKIQIVKASARGFHRFESYRIRILFYCG
KLNMAIGS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46995; Mature: 46995

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLSSHYHQLLGLPSNWEVENVNLSMSSRQVEIRLAFTGKQGECPICGQSCLIYDHAAE
CCCHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHH
QRWRHLDTMQFETILVARLPRCQCKEHGVKTVQAPWAARHSRFTLLFESFAVELLLHCAN
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
IKAASRLLRLNWHTVNQIMRRAVQRGLVRRKTETVEYLGIDEKSFKAGQHDVTTLTDLGE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH
RRVLEVVEHRTTEATKELLASLNDSQQAGVKAVSVDMWKPFIHAVQELLPKADLVHDRFH
HHHHHHHHHCCHHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH
ISKYLNEAVDLVRRKECRQLDKAGDKRLIGSTYVWLRNPENMGEQQQAELGKLMDAEFRT
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
GKAWSLKNMFRAFWQLGCADAGTFFFEYWSKRIDEVGLVPLTKVKELLQRHFGNVLTWFK
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HPITNAVSEGLNSKIQIVKASARGFHRFESYRIRILFYCGKLNMAIGS
HHHHHHHHHCCCCEEEEEEEHHHHHHHHHCEEEEEEEEECCEECCCCC
>Mature Secondary Structure
MQSLSSHYHQLLGLPSNWEVENVNLSMSSRQVEIRLAFTGKQGECPICGQSCLIYDHAAE
CCCHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHH
QRWRHLDTMQFETILVARLPRCQCKEHGVKTVQAPWAARHSRFTLLFESFAVELLLHCAN
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
IKAASRLLRLNWHTVNQIMRRAVQRGLVRRKTETVEYLGIDEKSFKAGQHDVTTLTDLGE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH
RRVLEVVEHRTTEATKELLASLNDSQQAGVKAVSVDMWKPFIHAVQELLPKADLVHDRFH
HHHHHHHHHCCHHHHHHHHHHCCCCHHHCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH
ISKYLNEAVDLVRRKECRQLDKAGDKRLIGSTYVWLRNPENMGEQQQAELGKLMDAEFRT
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCC
GKAWSLKNMFRAFWQLGCADAGTFFFEYWSKRIDEVGLVPLTKVKELLQRHFGNVLTWFK
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HPITNAVSEGLNSKIQIVKASARGFHRFESYRIRILFYCGKLNMAIGS
HHHHHHHHHCCCCEEEEEEEHHHHHHHHHCEEEEEEEEECCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]