Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21673281

Identifier: 21673281

GI number: 21673281

Start: 465145

End: 465987

Strand: Reverse

Name: 21673281

Synonym: CT0443

Alternate gene names: NA

Gene position: 465987-465145 (Counterclockwise)

Preceding gene: 21673283

Following gene: 21673271

Centisome position: 21.62

GC content: 42.7

Gene sequence:

>843_bases
ATGGATAAGAAACCGAGCATTTTAATTTTTATAGTTGCTTACAATGCGGAGAGTACGATTGAGAACGTCCTGATGCGCAT
TCCTGCTGACCTGCTCGATGATTTTGATGCCGAAGTGCTCGTTATAGATGACCAATCTTCTGATGATACTGTATTACGCT
GCGCTGAGACAATACAAAGCGGGAAAATCAGATTCAAGACCAATGTTCTGGTAAACCCCGAAAACCAGGGATATGGCGGA
AATCAGAAGGTAGGCTACCAATACGCTATTGAGCATGATTTCGACTGTGTAGCACTACTCCATGGCGATGGGCAATATGC
TCCGGAATACTTGAGAGATCTCATAACACCGGTTACAAAGGGAGAGGCCGAGGCAGTATTTGGTTCGAGAATGATGACAC
CTTTTGGCGCACTAAAAGGAGGGATGCCCGCCTACAAGTTTGTAGGCAACAAAATTCTGACTTTGTTTCAGAATATCATG
TTAAAAACCTCTTTAAGCGAATTTCACTCAGGCTACAGAGCATACTCCGTAAAAGCATTGAAGCAAATCCCGTTTCATTT
AAATACGCCCGATTTCCATTTCGATACTGAAATAATAATCCAGCTGATTCTTTGGGGCTTCCGTATCGCAGAACGCCCGA
TTCCAACCTATTATGGTGATGAAATCTGTTATGTGAATGGTCTCAAATACGCTTTAGATGTAGTCATTACCACAACGAAA
GCACGTATGCAGCGCCTTGGTCTTTTTCACGAATGCAAATACGAAGTTATTCATCCGCATAATAGTAACGGTTATCCTGA
GGCAAAACTATCCATAAAAAGTCCAAGCGGCAACCGCATTTGA

Upstream 100 bases:

>100_bases
ACAGGTGCCCTATAATTGGGAAGGGTCTTACTCAAAAGGCGCTATCGAGGTCAAATTTATAGACTCACGCAGATACAGCT
CTTTAAAAAGAAGAAAAGCA

Downstream 100 bases:

>100_bases
GCCATTGGGGACGCGAACCCTGAATAATACGCCTTTTACAGCCTTCAAGCTGCAACAGATAATGACTCTTGAGTGATTAC
CGGCATTTTGTGATTTATGA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQSGKIRFKTNVLVNPENQGYGG
NQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTKGEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIM
LKTSLSEFHSGYRAYSVKALKQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK
ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI

Sequences:

>Translated_280_residues
MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQSGKIRFKTNVLVNPENQGYGG
NQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTKGEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIM
LKTSLSEFHSGYRAYSVKALKQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK
ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI
>Mature_280_residues
MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQSGKIRFKTNVLVNPENQGYGG
NQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTKGEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIM
LKTSLSEFHSGYRAYSVKALKQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK
ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31571; Mature: 31571

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQS
CCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHC
GKIRFKTNVLVNPENQGYGGNQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTK
CCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCC
GEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIMLKTSLSEFHSGYRAYSVKAL
CCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECHH
ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI
HHHHHHCCHHHCCEEEECCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MDKKPSILIFIVAYNAESTIENVLMRIPADLLDDFDAEVLVIDDQSSDDTVLRCAETIQS
CCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHC
GKIRFKTNVLVNPENQGYGGNQKVGYQYAIEHDFDCVALLHGDGQYAPEYLRDLITPVTK
CCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCC
GEAEAVFGSRMMTPFGALKGGMPAYKFVGNKILTLFQNIMLKTSLSEFHSGYRAYSVKAL
CCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KQIPFHLNTPDFHFDTEIIIQLILWGFRIAERPIPTYYGDEICYVNGLKYALDVVITTTK
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECHH
ARMQRLGLFHECKYEVIHPHNSNGYPEAKLSIKSPSGNRI
HHHHHHCCHHHCCEEEECCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]