| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673277
Identifier: 21673277
GI number: 21673277
Start: 458443
End: 459807
Strand: Direct
Name: 21673277
Synonym: CT0439
Alternate gene names: NA
Gene position: 458443-459807 (Clockwise)
Preceding gene: 21673276
Following gene: 21673278
Centisome position: 21.27
GC content: 52.31
Gene sequence:
>1365_bases TTGCGTTCATTAAACCCGCTACATGCGCAATATCCCGGTGATTCCTTTTTTGAAAATCAGATATTTGTAAAGAAATTGGC GCCTCTAAAACAGGGTGGGGACTCTTTTTTTCTCAGTAAATCAGAACCTGTAGAAACAGATACCATGAAATCAGATAAGC ACTGGCTGAACCGGGAGCGTCTTACTGTTTATCCCCGAATTTTTCTGGCTCTGTTCCTTATCCTTGGTCTGGTGTGGGTT CTGATGTCGAAAAATATGCTTGACATTAAAGGAAAGCCGCTTGGATACGATTTTATGACATTCTGGGCTGCATCGCATCT TGCCTTGACGGGACATGCTCAAGACGCCTACAAAATACCCTTGCTTTTCAAGGCTCAGCAACTTGCCATATCGGCTTCAA AAGTTGCTTACGCATGGTTCTACCCGCCCACCTTCTATCTTGTTGTGCTGCCATTGGCGTTACTGCCTTACGTGACAGCA TACTGGACCTTTATGCTCTCAACGCTGTGGGGTTATCTTCTGGTGTTTCGCCGCATCGTTCGTGGCAACATCGCGATGTG GTGTCTGGCGGCATTCTCCGGATTGTGGATAAACTTTTTCTGCGGCCAGAACGGATTCCTGACTGCATCACTTGCCGGCT TGGCACTGCTCACCGTTGAGCGACGTCCTGTTCTGGCAGGAGTGTTCATCGGGCTGCTTGCCATCAAACCGCATCTTGCG ATGCTCTTTCCGGTGGCATTACTCGCTATTGGCGCGTGGCGAACGTTGGTAACCGCTGCCGTGACAGCGGTCACCTTTAT GGCTATTGGTATGGCAACTTTCGGAATCGCCGTATTGAAGGGCTTCCTTGCGAGCATTGGCGATGCTCGTCTGTTTCTGG AAAACGGCATTCTTGAATGGATAAAAATGCCCTCCGTTTTTGTGTTCATGCGCTTGCTCGGAATGCCCGTCGCCGGGGCG TATATTGCCCATTGTGCCGTAGCCATAGCGGCAGTAATCGTCGTCTGGCGTGTGTGGCGTCGTTGCGAAGATCGAAACCT GCGCGGTGCAGCCCTGATGACGGCAACGTTTCTGGTCAGCCCGTATGTGTTTGATTACGACCTTGCCTGGCTGGCCTTTC CGATCGCCTGGCTGTCATTGGATGGTTTGCGCAACGGCTGGTTGCGGGGCGAGCGTGAAGTGCTGGTCGCAGCCTGGTTG TTGCCGTTGCTGATGGCCGTGATAGCTGAAGCGGTGAAAGTGCAGATAGGGCCGCTGGTGCTTTGCAGCCTGTTGTGGGT GACGTATCGTCGTGCAACGGCCGCATCGATGGCTGGTGCCCTTGCAACCGACGCCTATGACGATCAGCTCGGAACGGTAC CGTAA
Upstream 100 bases:
>100_bases GTAAATACCCCGCCGTTTACGGCGTAAAGTATTCAAGTATTGCCTTCAAGATACCCCGCTGCTTGCGGCGGGGTTCTTCA TTACGGGACAACTCTGAAAA
Downstream 100 bases:
>100_bases GCGGAACTTTTTTCGCTTGATTCTGGAAAACACTTCGACGATGCCCAAAAAATCGCGGAATACGAAAGAGATAAAGAGGT CATGAAATCGGACGCGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRSLNPLHAQYPGDSFFENQIFVKKLAPLKQGGDSFFLSKSEPVETDTMKSDKHWLNRERLTVYPRIFLALFLILGLVWV LMSKNMLDIKGKPLGYDFMTFWAASHLALTGHAQDAYKIPLLFKAQQLAISASKVAYAWFYPPTFYLVVLPLALLPYVTA YWTFMLSTLWGYLLVFRRIVRGNIAMWCLAAFSGLWINFFCGQNGFLTASLAGLALLTVERRPVLAGVFIGLLAIKPHLA MLFPVALLAIGAWRTLVTAAVTAVTFMAIGMATFGIAVLKGFLASIGDARLFLENGILEWIKMPSVFVFMRLLGMPVAGA YIAHCAVAIAAVIVVWRVWRRCEDRNLRGAALMTATFLVSPYVFDYDLAWLAFPIAWLSLDGLRNGWLRGEREVLVAAWL LPLLMAVIAEAVKVQIGPLVLCSLLWVTYRRATAASMAGALATDAYDDQLGTVP
Sequences:
>Translated_454_residues MRSLNPLHAQYPGDSFFENQIFVKKLAPLKQGGDSFFLSKSEPVETDTMKSDKHWLNRERLTVYPRIFLALFLILGLVWV LMSKNMLDIKGKPLGYDFMTFWAASHLALTGHAQDAYKIPLLFKAQQLAISASKVAYAWFYPPTFYLVVLPLALLPYVTA YWTFMLSTLWGYLLVFRRIVRGNIAMWCLAAFSGLWINFFCGQNGFLTASLAGLALLTVERRPVLAGVFIGLLAIKPHLA MLFPVALLAIGAWRTLVTAAVTAVTFMAIGMATFGIAVLKGFLASIGDARLFLENGILEWIKMPSVFVFMRLLGMPVAGA YIAHCAVAIAAVIVVWRVWRRCEDRNLRGAALMTATFLVSPYVFDYDLAWLAFPIAWLSLDGLRNGWLRGEREVLVAAWL LPLLMAVIAEAVKVQIGPLVLCSLLWVTYRRATAASMAGALATDAYDDQLGTVP >Mature_454_residues MRSLNPLHAQYPGDSFFENQIFVKKLAPLKQGGDSFFLSKSEPVETDTMKSDKHWLNRERLTVYPRIFLALFLILGLVWV LMSKNMLDIKGKPLGYDFMTFWAASHLALTGHAQDAYKIPLLFKAQQLAISASKVAYAWFYPPTFYLVVLPLALLPYVTA YWTFMLSTLWGYLLVFRRIVRGNIAMWCLAAFSGLWINFFCGQNGFLTASLAGLALLTVERRPVLAGVFIGLLAIKPHLA MLFPVALLAIGAWRTLVTAAVTAVTFMAIGMATFGIAVLKGFLASIGDARLFLENGILEWIKMPSVFVFMRLLGMPVAGA YIAHCAVAIAAVIVVWRVWRRCEDRNLRGAALMTATFLVSPYVFDYDLAWLAFPIAWLSLDGLRNGWLRGEREVLVAAWL LPLLMAVIAEAVKVQIGPLVLCSLLWVTYRRATAASMAGALATDAYDDQLGTVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50465; Mature: 50465
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLNPLHAQYPGDSFFENQIFVKKLAPLKQGGDSFFLSKSEPVETDTMKSDKHWLNRER CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHCCCC LTVYPRIFLALFLILGLVWVLMSKNMLDIKGKPLGYDFMTFWAASHLALTGHAQDAYKIP EEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHEEECCCCCCEECC LLFKAQQLAISASKVAYAWFYPPTFYLVVLPLALLPYVTAYWTFMLSTLWGYLLVFRRIV CEEEHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGNIAMWCLAAFSGLWINFFCGQNGFLTASLAGLALLTVERRPVLAGVFIGLLAIKPHLA HCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH MLFPVALLAIGAWRTLVTAAVTAVTFMAIGMATFGIAVLKGFLASIGDARLFLENGILEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IKMPSVFVFMRLLGMPVAGAYIAHCAVAIAAVIVVWRVWRRCEDRNLRGAALMTATFLVS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC PYVFDYDLAWLAFPIAWLSLDGLRNGWLRGEREVLVAAWLLPLLMAVIAEAVKVQIGPLV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCSLLWVTYRRATAASMAGALATDAYDDQLGTVP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRSLNPLHAQYPGDSFFENQIFVKKLAPLKQGGDSFFLSKSEPVETDTMKSDKHWLNRER CCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHCCCC LTVYPRIFLALFLILGLVWVLMSKNMLDIKGKPLGYDFMTFWAASHLALTGHAQDAYKIP EEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHEEECCCCCCEECC LLFKAQQLAISASKVAYAWFYPPTFYLVVLPLALLPYVTAYWTFMLSTLWGYLLVFRRIV CEEEHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGNIAMWCLAAFSGLWINFFCGQNGFLTASLAGLALLTVERRPVLAGVFIGLLAIKPHLA HCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH MLFPVALLAIGAWRTLVTAAVTAVTFMAIGMATFGIAVLKGFLASIGDARLFLENGILEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IKMPSVFVFMRLLGMPVAGAYIAHCAVAIAAVIVVWRVWRRCEDRNLRGAALMTATFLVS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC PYVFDYDLAWLAFPIAWLSLDGLRNGWLRGEREVLVAAWLLPLLMAVIAEAVKVQIGPLV CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCSLLWVTYRRATAASMAGALATDAYDDQLGTVP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA