| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is yafE [C]
Identifier: 21673222
GI number: 21673222
Start: 395344
End: 396222
Strand: Direct
Name: yafE [C]
Synonym: CT0383
Alternate gene names: 21673222
Gene position: 395344-396222 (Clockwise)
Preceding gene: 21673220
Following gene: 21673238
Centisome position: 18.35
GC content: 48.92
Gene sequence:
>879_bases ATGTCAGATGATACGATAGATCGTTTTTTTGGATATCTGAACTGGCTTTTCAATCCATTCCACGGGTTGAAAACAACGGA AGTCTATGATTTGATCGGCACCTCTTCTCTAACCGAGAACGCGCTCTATCTGAATCTCGGCTATTGGCGGAAGGCGGATA CCATCGATGAAGCCAGTGAAGCGCTTGCGCTGCTGGTGGCGAAAAGAGGCGGCATGGGGCCGGGCGATATTGTGCTGGAT TGTGGGTACGGTTTTGGCGATCAGGACATCCTCTGGGCAAGACAACTGAAACCCGAAAAAATCATCGGCCTGAACATTAC GAGTTCCCAGGTGGAGCGCGCCCGGAAGCGTGTTGCTGATGCAGGTCTGGAACAATCAATCGATTTACGAGAAGGTTCGG CAACAGCAATGCCCATTGAAAACGAGTCCATCGATCTGGTGGTTTCCGTAGAAAGCGCTTTCCACTACAGAACTCGTGAG GCTTTTTTCAGGGAAGCGTTCCGCGTTTTGCGGCCGGGCGGAAGGCTTGTGACAGCGGACATTGTGCCAACAGAAAACTC CGGCAATCCCTTCAGGCGAATGGAGCAGTGGTTTTCATGGAATCTTGTAGCAGGAAAATTCAATATTCCGCAAGAAAACT ATTACTTGATCCCATCCTACCAGAACAAGCTCACCAAAGCCGGATTTGTCCAGATTGACATCAAATCCATCCGTGACGAT GTCTATGAACCGCTTCATGCGTATCTGGCAAAAAACCGGACATTTTTTGCCAAGATGCATCCCCTTGCAAGGATTATGGC GCAATTAACCCTGAATCGTTCTGCAGAGAGTGTGTATGCCGGCTTGGATTATATCCTTTCTTATGCTGAAAAGCCATAG
Upstream 100 bases:
>100_bases TTCCCACGCATGATCATCTGGGCGCATTCACAGGTTAAGAGGCTCATCGACGGATGGTGAACATGATTCGGGCGGCTTCA TCGGAAAACAAATCATCACC
Downstream 100 bases:
>100_bases TCTGAAGCGGCTCTCAGGGTATGCAAAAATGAATGACACAGAACAGCGTTAAGCAAGCGCCTGTTTGAAGGCCGCTTTTA TACGAGAGCCACTCAAGTCT
Product: methlytransferase, putative
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Erythromycin C Methlytransferase; McyJ Protein; Methlytransferase
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSDDTIDRFFGYLNWLFNPFHGLKTTEVYDLIGTSSLTENALYLNLGYWRKADTIDEASEALALLVAKRGGMGPGDIVLD CGYGFGDQDILWARQLKPEKIIGLNITSSQVERARKRVADAGLEQSIDLREGSATAMPIENESIDLVVSVESAFHYRTRE AFFREAFRVLRPGGRLVTADIVPTENSGNPFRRMEQWFSWNLVAGKFNIPQENYYLIPSYQNKLTKAGFVQIDIKSIRDD VYEPLHAYLAKNRTFFAKMHPLARIMAQLTLNRSAESVYAGLDYILSYAEKP
Sequences:
>Translated_292_residues MSDDTIDRFFGYLNWLFNPFHGLKTTEVYDLIGTSSLTENALYLNLGYWRKADTIDEASEALALLVAKRGGMGPGDIVLD CGYGFGDQDILWARQLKPEKIIGLNITSSQVERARKRVADAGLEQSIDLREGSATAMPIENESIDLVVSVESAFHYRTRE AFFREAFRVLRPGGRLVTADIVPTENSGNPFRRMEQWFSWNLVAGKFNIPQENYYLIPSYQNKLTKAGFVQIDIKSIRDD VYEPLHAYLAKNRTFFAKMHPLARIMAQLTLNRSAESVYAGLDYILSYAEKP >Mature_291_residues SDDTIDRFFGYLNWLFNPFHGLKTTEVYDLIGTSSLTENALYLNLGYWRKADTIDEASEALALLVAKRGGMGPGDIVLDC GYGFGDQDILWARQLKPEKIIGLNITSSQVERARKRVADAGLEQSIDLREGSATAMPIENESIDLVVSVESAFHYRTREA FFREAFRVLRPGGRLVTADIVPTENSGNPFRRMEQWFSWNLVAGKFNIPQENYYLIPSYQNKLTKAGFVQIDIKSIRDDV YEPLHAYLAKNRTFFAKMHPLARIMAQLTLNRSAESVYAGLDYILSYAEKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33115; Mature: 32984
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDTIDRFFGYLNWLFNPFHGLKTTEVYDLIGTSSLTENALYLNLGYWRKADTIDEASE CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH ALALLVAKRGGMGPGDIVLDCGYGFGDQDILWARQLKPEKIIGLNITSSQVERARKRVAD HHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH AGLEQSIDLREGSATAMPIENESIDLVVSVESAFHYRTREAFFREAFRVLRPGGRLVTAD CCCCCCCCCCCCCCEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IVPTENSGNPFRRMEQWFSWNLVAGKFNIPQENYYLIPSYQNKLTKAGFVQIDIKSIRDD EEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCEEEEECHHCCCCCCCEEEEEHHHHHHH VYEPLHAYLAKNRTFFAKMHPLARIMAQLTLNRSAESVYAGLDYILSYAEKP HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDDTIDRFFGYLNWLFNPFHGLKTTEVYDLIGTSSLTENALYLNLGYWRKADTIDEASE CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH ALALLVAKRGGMGPGDIVLDCGYGFGDQDILWARQLKPEKIIGLNITSSQVERARKRVAD HHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH AGLEQSIDLREGSATAMPIENESIDLVVSVESAFHYRTREAFFREAFRVLRPGGRLVTAD CCCCCCCCCCCCCCEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE IVPTENSGNPFRRMEQWFSWNLVAGKFNIPQENYYLIPSYQNKLTKAGFVQIDIKSIRDD EEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCEEEEECHHCCCCCCCEEEEEHHHHHHH VYEPLHAYLAKNRTFFAKMHPLARIMAQLTLNRSAESVYAGLDYILSYAEKP HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA