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The map label for this gene is ycjS [C]

Identifier: 21673212

GI number: 21673212

Start: 384407

End: 385552

Strand: Direct

Name: ycjS [C]

Synonym: CT0373

Alternate gene names: 21673212

Gene position: 384407-385552 (Clockwise)

Preceding gene: 21673211

Following gene: 21673213

Centisome position: 17.84

GC content: 60.38

Gene sequence:

>1146_bases
ATGAAACAAAAGATCAGGATCGGATTTATCGGCAGTGGATGGGCGCAGGTGGCGCAGGCTCCGGCCTTTTCGCTGATGGA
AGATGTTGAACTGGCAGCGGTTGCAAGTCCGACTGAACGGCGGCGGCAGAAGTTTCAGGATCGCTTCGGCATTCCGGAAG
GCTACGCTGACTGGCGCGAGATGCTCGACGAGTGCCCGCTCGATCTGGTATGCGTCACTACGCCGACCTTTCTGCACGAT
CCGATGGTGACGGGCGCGCTCGAAAAGGGTGTTGGTGTGCTCTGCGAAAAGCCGTTTGCCCTGACCGTCGAGGAGGCCGA
GCGCATGAACGCGCTTGCCTCGAAATCGCCGGGCCTTTCGCTGATCGATCACCAGCTCCGGTTCCATCCGTCGGTCAGGA
GCATGAAGCAGATGATCGACAGCGGCGAAATTGGCAAGGTGTATGAAGTTCGCGCCGTAGTGAACCTCGCCTCGCGTAAC
CGCATCGACATGCCGTGGTCGTGGTGGAGCGACGCCTCGAAGGGCGGCGGCGCGCTTCGGGCGCTTGGCTCGCACCTGAT
CGATTTGAACCGTTTTCTCGTCGGCGAGATTTCAGAAGTGTGCTGCAACCTTTCGACCTCGATTCCGCAGCGCCCCGATG
CCTCGACGTCCGGCAAAAGCCTGCCGGTTACGTCGGACGACAGCTTCGCCATGTTCATGAAGTTCGGCCCTTCGTCGGTG
GCGCTCGGCGCGTCGTCGCTCATGCACGTCACCACGGTTGGCTCCTACACCTGGTTTTCGCTTGAAGTGGTTGGAAGCCT
CAAAACCATTCGGCTCGACGGTGCGGGTCGTCTCTGGGAGATCGTCAACAGCGAGGTCAAAGGAGGGCGCAGCCTCATCG
ACGCGCCGCGCTGGAAGCAGTTGGAGCCGATGCTGCCGTGGGACGAGCTGGTGCTTCAGGAGAAGATCAAGCAGTCCTCA
CTCGCCGTGCACGGTATCTTCGCCGTCGGCTTTGCTTTTCTTGCACATCGCATCGTCAAAGCGTTGAAGAGCGGCGACCC
GGTCATTTTGCAGGACGCAGCAAGCTTCCGCGACGGCCTTGCCATCCAGAAGGTGATGCAGGCCGGGCTCGATTCTGACC
GTGAGAAGCGCTGGGTGAAAGTGTAG

Upstream 100 bases:

>100_bases
AGCGGGTGTCTCTTAACGGTTTTGAGGGGTGATCGTTTGGTCACCCTTTTTTTTGGTTAAGATTTCGTATGAACCGCACG
ATGACAAAGTCAATCACACG

Downstream 100 bases:

>100_bases
TCGATGGATGATTCGGTCGATCTGTCCCGTAAATGATGTTATAACCAGCAGGAACTGAATCGTGGCGTGGGTGATGCTGT
TTGTGGCCGGGCTGTTCGAG

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKQKIRIGFIGSGWAQVAQAPAFSLMEDVELAAVASPTERRRQKFQDRFGIPEGYADWREMLDECPLDLVCVTTPTFLHD
PMVTGALEKGVGVLCEKPFALTVEEAERMNALASKSPGLSLIDHQLRFHPSVRSMKQMIDSGEIGKVYEVRAVVNLASRN
RIDMPWSWWSDASKGGGALRALGSHLIDLNRFLVGEISEVCCNLSTSIPQRPDASTSGKSLPVTSDDSFAMFMKFGPSSV
ALGASSLMHVTTVGSYTWFSLEVVGSLKTIRLDGAGRLWEIVNSEVKGGRSLIDAPRWKQLEPMLPWDELVLQEKIKQSS
LAVHGIFAVGFAFLAHRIVKALKSGDPVILQDAASFRDGLAIQKVMQAGLDSDREKRWVKV

Sequences:

>Translated_381_residues
MKQKIRIGFIGSGWAQVAQAPAFSLMEDVELAAVASPTERRRQKFQDRFGIPEGYADWREMLDECPLDLVCVTTPTFLHD
PMVTGALEKGVGVLCEKPFALTVEEAERMNALASKSPGLSLIDHQLRFHPSVRSMKQMIDSGEIGKVYEVRAVVNLASRN
RIDMPWSWWSDASKGGGALRALGSHLIDLNRFLVGEISEVCCNLSTSIPQRPDASTSGKSLPVTSDDSFAMFMKFGPSSV
ALGASSLMHVTTVGSYTWFSLEVVGSLKTIRLDGAGRLWEIVNSEVKGGRSLIDAPRWKQLEPMLPWDELVLQEKIKQSS
LAVHGIFAVGFAFLAHRIVKALKSGDPVILQDAASFRDGLAIQKVMQAGLDSDREKRWVKV
>Mature_381_residues
MKQKIRIGFIGSGWAQVAQAPAFSLMEDVELAAVASPTERRRQKFQDRFGIPEGYADWREMLDECPLDLVCVTTPTFLHD
PMVTGALEKGVGVLCEKPFALTVEEAERMNALASKSPGLSLIDHQLRFHPSVRSMKQMIDSGEIGKVYEVRAVVNLASRN
RIDMPWSWWSDASKGGGALRALGSHLIDLNRFLVGEISEVCCNLSTSIPQRPDASTSGKSLPVTSDDSFAMFMKFGPSSV
ALGASSLMHVTTVGSYTWFSLEVVGSLKTIRLDGAGRLWEIVNSEVKGGRSLIDAPRWKQLEPMLPWDELVLQEKIKQSS
LAVHGIFAVGFAFLAHRIVKALKSGDPVILQDAASFRDGLAIQKVMQAGLDSDREKRWVKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI226371727, Length=393, Percent_Identity=27.735368956743, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI9506675, Length=202, Percent_Identity=27.2277227722772, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1787574, Length=194, Percent_Identity=28.3505154639175, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081947, Length=273, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19920536, Length=320, Percent_Identity=28.125, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581117, Length=173, Percent_Identity=28.9017341040462, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41918; Mature: 41918

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKIRIGFIGSGWAQVAQAPAFSLMEDVELAAVASPTERRRQKFQDRFGIPEGYADWRE
CCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHH
MLDECPLDLVCVTTPTFLHDPMVTGALEKGVGVLCEKPFALTVEEAERMNALASKSPGLS
HHHHCCCCEEEECCCHHHHCCHHHHHHHHCCHHEECCCCEEEHHHHHHHHHHHCCCCCCH
LIDHQLRFHPSVRSMKQMIDSGEIGKVYEVRAVVNLASRNRIDMPWSWWSDASKGGGALR
HHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
ALGSHLIDLNRFLVGEISEVCCNLSTSIPQRPDASTSGKSLPVTSDDSFAMFMKFGPSSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHH
ALGASSLMHVTTVGSYTWFSLEVVGSLKTIRLDGAGRLWEIVNSEVKGGRSLIDAPRWKQ
HHHHHHHHHEEEECCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCCCC
LEPMLPWDELVLQEKIKQSSLAVHGIFAVGFAFLAHRIVKALKSGDPVILQDAASFRDGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCH
AIQKVMQAGLDSDREKRWVKV
HHHHHHHHCCCCCHHHCCCCC
>Mature Secondary Structure
MKQKIRIGFIGSGWAQVAQAPAFSLMEDVELAAVASPTERRRQKFQDRFGIPEGYADWRE
CCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHH
MLDECPLDLVCVTTPTFLHDPMVTGALEKGVGVLCEKPFALTVEEAERMNALASKSPGLS
HHHHCCCCEEEECCCHHHHCCHHHHHHHHCCHHEECCCCEEEHHHHHHHHHHHCCCCCCH
LIDHQLRFHPSVRSMKQMIDSGEIGKVYEVRAVVNLASRNRIDMPWSWWSDASKGGGALR
HHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
ALGSHLIDLNRFLVGEISEVCCNLSTSIPQRPDASTSGKSLPVTSDDSFAMFMKFGPSSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHH
ALGASSLMHVTTVGSYTWFSLEVVGSLKTIRLDGAGRLWEIVNSEVKGGRSLIDAPRWKQ
HHHHHHHHHEEEECCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCHHHCCCCCCC
LEPMLPWDELVLQEKIKQSSLAVHGIFAVGFAFLAHRIVKALKSGDPVILQDAASFRDGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCH
AIQKVMQAGLDSDREKRWVKV
HHHHHHHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]