| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673183
Identifier: 21673183
GI number: 21673183
Start: 360436
End: 361722
Strand: Direct
Name: 21673183
Synonym: CT0344
Alternate gene names: NA
Gene position: 360436-361722 (Clockwise)
Preceding gene: 21673182
Following gene: 21673184
Centisome position: 16.73
GC content: 54.62
Gene sequence:
>1287_bases ATGACAAAGGCGCAGCATCCGGGAGCGACGCCGGTTGATTTATCCTTCACCCGCTACGTCCACAGCGTCAATGCCTTTTC TCCGCTTTTCTCATGCCGCCGGTCAATCTGTGATGCAACGGTGTTACGCCGTTGCTGCTTTCTTCTATATTTCCGTAATA ATTGTAATTTTAAGCTGTTGGCATCCAGTCCCGTGGCTTTTGACTGGCAACGGGAAGGTATTAAACAAACGCAGTGCATG AAGATCCTTTTCGGCGTTCAGGGAACAGGGAATGGCCATATCAGCAGAAGCAGGGAGCTGGTCAGAAAGCTCAAGGAAGA TGGGCATGAGGTTCAGGTCATCATCAGCGGCAGAAAGGAGGAAGAGCTTCGTGAGATTGAGGTGTTTGCTCCCTACAAGG TGCTCAAGGGCTTCACCCTGGTGACGCGCCGCGGCAAGATGAGCTACATGGAGACCATGTTCCAGCTCGATTTTGTCAGT CTTTGGACCGATGTTCTGTCGCTCGATACTTCGTGTGTCGATCTGGTGATTACCGATTTCGAGCCGGTCACTTCGATGGC TGCCCGGTTCAAAGGGATCGTGAGCGTCGGGTTTGGTCACCAGTACGCATTTCCCTTCCATATTCCCATCGCACGCGGTA ATCTCTTCGAGAAGTACACTCTGCTCAATTTCGCTCCGGCCCGCTACAACGCCGGATTGCACTGGGACCATTTCAACCAG CCAATCTTTCCCCCGGTTATTCCTCAAACACTCTACGATGCCGTTCGGCCAGAAGAGGATCCGCAGAAGATTCTGGTTTA TCTGCCGTTCGAGGAGGTCGAGGACATTGATGCGTTTCTCCGTCCGTTCGATGCGTACCGCTTTTTTATTTACGGCAAGG TCAAAGAGGATCGCGACGATGGTCATCTCTGTTTTCGGGGCTACTCGCGGGAGGGGTTCCTGCGCGACCTCATGGAGTGC TCCGGGGTGGTTTGCAACGCGGGCTTCGAGCTGCCGGGCGAGGCGTTGCATCTCGGCAAGAAGATGCTGCTCCGTCCGCT CGATGGCCAGATCGAGCAGGAGTCTAACGCGCTGGCAATGGTGCAGCTCGGCTATGGCATGTCGATGCACACGCTCGATG GCGAGGTGCTCAAGGAGTGGTTCGCCATGCCGCCGGGCAAGCCGCTTAATTATTCGAGGACGGTCGATTACATCGCCGAG TGGATTGCTTCGGGCAGATGGAACGATCTGCGCGTCTTTACCGATGCCGCATGGAAGGATCACTGTCGCGAGGAGTCGAA ATCATGA
Upstream 100 bases:
>100_bases AACTTCCGCACCGCCGGCGAAAAAACGCTGATGGTGCAGTACGCCAATCTGAAGATCGTGTGATGAACGCTGCCTGACGG GATGCTTCGCTCTGCTCAGC
Downstream 100 bases:
>100_bases AGCTCAGGGAACTGGTGGCCCGGAGTCGCAGCATCCGGCGGTTCGACGAACATGTCGCCGTGAATGATGCAACGCTTCGC GATCTGGTTGAGCTGGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Teichoic Acid Biosynthesis Related Protein; Glycosyltransferase; Glycosyltransferase-Distantly-Related Protein; Glycosyl Transferase Gt1A; Glycosyltransferase Family 1 Domain Protein; Glycosyl Transferase Family Protein; UDP-Glucuronosyltransferase-Like Protein
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTKAQHPGATPVDLSFTRYVHSVNAFSPLFSCRRSICDATVLRRCCFLLYFRNNCNFKLLASSPVAFDWQREGIKQTQCM KILFGVQGTGNGHISRSRELVRKLKEDGHEVQVIISGRKEEELREIEVFAPYKVLKGFTLVTRRGKMSYMETMFQLDFVS LWTDVLSLDTSCVDLVITDFEPVTSMAARFKGIVSVGFGHQYAFPFHIPIARGNLFEKYTLLNFAPARYNAGLHWDHFNQ PIFPPVIPQTLYDAVRPEEDPQKILVYLPFEEVEDIDAFLRPFDAYRFFIYGKVKEDRDDGHLCFRGYSREGFLRDLMEC SGVVCNAGFELPGEALHLGKKMLLRPLDGQIEQESNALAMVQLGYGMSMHTLDGEVLKEWFAMPPGKPLNYSRTVDYIAE WIASGRWNDLRVFTDAAWKDHCREESKS
Sequences:
>Translated_428_residues MTKAQHPGATPVDLSFTRYVHSVNAFSPLFSCRRSICDATVLRRCCFLLYFRNNCNFKLLASSPVAFDWQREGIKQTQCM KILFGVQGTGNGHISRSRELVRKLKEDGHEVQVIISGRKEEELREIEVFAPYKVLKGFTLVTRRGKMSYMETMFQLDFVS LWTDVLSLDTSCVDLVITDFEPVTSMAARFKGIVSVGFGHQYAFPFHIPIARGNLFEKYTLLNFAPARYNAGLHWDHFNQ PIFPPVIPQTLYDAVRPEEDPQKILVYLPFEEVEDIDAFLRPFDAYRFFIYGKVKEDRDDGHLCFRGYSREGFLRDLMEC SGVVCNAGFELPGEALHLGKKMLLRPLDGQIEQESNALAMVQLGYGMSMHTLDGEVLKEWFAMPPGKPLNYSRTVDYIAE WIASGRWNDLRVFTDAAWKDHCREESKS >Mature_427_residues TKAQHPGATPVDLSFTRYVHSVNAFSPLFSCRRSICDATVLRRCCFLLYFRNNCNFKLLASSPVAFDWQREGIKQTQCMK ILFGVQGTGNGHISRSRELVRKLKEDGHEVQVIISGRKEEELREIEVFAPYKVLKGFTLVTRRGKMSYMETMFQLDFVSL WTDVLSLDTSCVDLVITDFEPVTSMAARFKGIVSVGFGHQYAFPFHIPIARGNLFEKYTLLNFAPARYNAGLHWDHFNQP IFPPVIPQTLYDAVRPEEDPQKILVYLPFEEVEDIDAFLRPFDAYRFFIYGKVKEDRDDGHLCFRGYSREGFLRDLMECS GVVCNAGFELPGEALHLGKKMLLRPLDGQIEQESNALAMVQLGYGMSMHTLDGEVLKEWFAMPPGKPLNYSRTVDYIAEW IASGRWNDLRVFTDAAWKDHCREESKS
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49119; Mature: 48988
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAQHPGATPVDLSFTRYVHSVNAFSPLFSCRRSICDATVLRRCCFLLYFRNNCNFKLL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE ASSPVAFDWQREGIKQTQCMKILFGVQGTGNGHISRSRELVRKLKEDGHEVQVIISGRKE ECCCCEECHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCH EELREIEVFAPYKVLKGFTLVTRRGKMSYMETMFQLDFVSLWTDVLSLDTSCVDLVITDF HHHHHHHEECCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC EPVTSMAARFKGIVSVGFGHQYAFPFHIPIARGNLFEKYTLLNFAPARYNAGLHWDHFNQ CHHHHHHHHHHHHEEECCCCEECCEEEEEECCCCCHHHHHHEEECCHHCCCCCCCCCCCC PIFPPVIPQTLYDAVRPEEDPQKILVYLPFEEVEDIDAFLRPFDAYRFFIYGKVKEDRDD CCCCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCHHHEEEEEEEEEECCCCC GHLCFRGYSREGFLRDLMECSGVVCNAGFELPGEALHLGKKMLLRPLDGQIEQESNALAM CCEEEECCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE VQLGYGMSMHTLDGEVLKEWFAMPPGKPLNYSRTVDYIAEWIASGRWNDLRVFTDAAWKD EEECCCCEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHH HCREESKS HHHHCCCC >Mature Secondary Structure TKAQHPGATPVDLSFTRYVHSVNAFSPLFSCRRSICDATVLRRCCFLLYFRNNCNFKLL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE ASSPVAFDWQREGIKQTQCMKILFGVQGTGNGHISRSRELVRKLKEDGHEVQVIISGRKE ECCCCEECHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCH EELREIEVFAPYKVLKGFTLVTRRGKMSYMETMFQLDFVSLWTDVLSLDTSCVDLVITDF HHHHHHHEECCHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC EPVTSMAARFKGIVSVGFGHQYAFPFHIPIARGNLFEKYTLLNFAPARYNAGLHWDHFNQ CHHHHHHHHHHHHEEECCCCEECCEEEEEECCCCCHHHHHHEEECCHHCCCCCCCCCCCC PIFPPVIPQTLYDAVRPEEDPQKILVYLPFEEVEDIDAFLRPFDAYRFFIYGKVKEDRDD CCCCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCHHHEEEEEEEEEECCCCC GHLCFRGYSREGFLRDLMECSGVVCNAGFELPGEALHLGKKMLLRPLDGQIEQESNALAM CCEEEECCCCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEE VQLGYGMSMHTLDGEVLKEWFAMPPGKPLNYSRTVDYIAEWIASGRWNDLRVFTDAAWKD EEECCCCEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHH HCREESKS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA