| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is crtC
Identifier: 21673140
GI number: 21673140
Start: 312347
End: 313495
Strand: Direct
Name: crtC
Synonym: CT0301
Alternate gene names: 21673140
Gene position: 312347-313495 (Clockwise)
Preceding gene: 21673139
Following gene: 21673141
Centisome position: 14.49
GC content: 53.44
Gene sequence:
>1149_bases ATGAACATCACGACCGATTCTCTTCAGCAGGCATGGCACCGGCTCGATGCTCCGGGTTCCTACGAGTGGTGGTATTTCGA TGCCGAAGATGAATCAGAAGGAATCTCCGTAGTTTTTATCTGGTTTGTCGGCTTTGCTTTTTCGCCCTACTACCTGAGCC ATTACGAGGAGTGGAAAGCCCATCGCCGGGACGACCAGCCATATCCGCTAGACTACGGAGGCTTCAGCTTTCAGCTCTAT CAGGATGGTCGCGAAACCATCAATTTCATCAAGGAAGGGGGGCGTGAGCTTTTCGCCTCCGAAGATGGTGGAATCGGTGT GCGGTTCGAGGGGAACCGTTTCGTTTACGATCCCCTGCGCGACGAGTATCGCCTCAGCATCGACTTTTCATTTCCGGCTC GCGACCGATCGGTTCAGGCATCCTTCTCTTTTCGCCCTCTGCACCGTTTCGATTACCACTTCGATACCGATCTGCACGCT GGCGTCGATTTCCGTCACCAGTGGGTTCTGAGCGTCCCCAAAGCCGAGGTGCATGGCCTGCTCGATATCACATCGCTTTC GTCGGACAAACGTCAGGTTCTGCAATTCCGTGGACGGGGCTACCACGACCACAATCTCGGCACCGTACCGATGTACGAAT CAATCGACCGGTGGTACTGGGGGCGGACTTTTTCGAGACGTTGCGACCTGATCTATTACGTGGTTTTTTTGCGCGGCTGT TCCGCCGAGCCACAGGCGGTACTTATGCTTCTCGATCATAAAACTGGACGGCAGTCAACGTTCGACGCAGTACGTGTCAG CGAGAGTCGCTTTACCAGAGGGCTGTTTGCACCGGTTCACGGAAAAACATTACGGCTCGAAGCGGAAGGCGTTAGCGTGG AGGTGCAGCACCAAAAGGCGCTCGATACCGGCCCGTTCTACCTCCGGTACACCTCACTGCTCTCGATGATGATCGGGGAG GAGGCGCAGGAGGAGGTGAGAGGTATCTCTGAGTTTCTGAATCCTGCACCGCTGAAGTCGAGGTTGATGCAATTTTTTAC GGCAAGTCGTGTCTGGCGTGCTGGCAAGCAATCTGCCATGTATGTCCTGTACAATTTTTTCAAGCACCGATTTGAAAGGG TTCATAGGATAAATAGGAAAAAATTTTAA
Upstream 100 bases:
>100_bases TCCTTCTTTTTCCTTCAATCTTTCTCGTGCAGGTTGTTCAGGCTTCCTGCCCGTTGTGCGGTGATTCCGTCAGCCCGTTT TCCCATCCTCAGCTTCCGGT
Downstream 100 bases:
>100_bases CTTCGGCGTTAAGCTTTACAATCAATCCGTGTTCCCGGCATCCTCACCAAGCCTGAACAAGGGCACATTCCGGTGAAGTA TTCACGAGATGCCGTCAGGC
Product: hydroxyneurosporene synthase CrtC
Products: NA
Alternate protein names: Hydroxyneurosporene synthase
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MNITTDSLQQAWHRLDAPGSYEWWYFDAEDESEGISVVFIWFVGFAFSPYYLSHYEEWKAHRRDDQPYPLDYGGFSFQLY QDGRETINFIKEGGRELFASEDGGIGVRFEGNRFVYDPLRDEYRLSIDFSFPARDRSVQASFSFRPLHRFDYHFDTDLHA GVDFRHQWVLSVPKAEVHGLLDITSLSSDKRQVLQFRGRGYHDHNLGTVPMYESIDRWYWGRTFSRRCDLIYYVVFLRGC SAEPQAVLMLLDHKTGRQSTFDAVRVSESRFTRGLFAPVHGKTLRLEAEGVSVEVQHQKALDTGPFYLRYTSLLSMMIGE EAQEEVRGISEFLNPAPLKSRLMQFFTASRVWRAGKQSAMYVLYNFFKHRFERVHRINRKKF
Sequences:
>Translated_382_residues MNITTDSLQQAWHRLDAPGSYEWWYFDAEDESEGISVVFIWFVGFAFSPYYLSHYEEWKAHRRDDQPYPLDYGGFSFQLY QDGRETINFIKEGGRELFASEDGGIGVRFEGNRFVYDPLRDEYRLSIDFSFPARDRSVQASFSFRPLHRFDYHFDTDLHA GVDFRHQWVLSVPKAEVHGLLDITSLSSDKRQVLQFRGRGYHDHNLGTVPMYESIDRWYWGRTFSRRCDLIYYVVFLRGC SAEPQAVLMLLDHKTGRQSTFDAVRVSESRFTRGLFAPVHGKTLRLEAEGVSVEVQHQKALDTGPFYLRYTSLLSMMIGE EAQEEVRGISEFLNPAPLKSRLMQFFTASRVWRAGKQSAMYVLYNFFKHRFERVHRINRKKF >Mature_382_residues MNITTDSLQQAWHRLDAPGSYEWWYFDAEDESEGISVVFIWFVGFAFSPYYLSHYEEWKAHRRDDQPYPLDYGGFSFQLY QDGRETINFIKEGGRELFASEDGGIGVRFEGNRFVYDPLRDEYRLSIDFSFPARDRSVQASFSFRPLHRFDYHFDTDLHA GVDFRHQWVLSVPKAEVHGLLDITSLSSDKRQVLQFRGRGYHDHNLGTVPMYESIDRWYWGRTFSRRCDLIYYVVFLRGC SAEPQAVLMLLDHKTGRQSTFDAVRVSESRFTRGLFAPVHGKTLRLEAEGVSVEVQHQKALDTGPFYLRYTSLLSMMIGE EAQEEVRGISEFLNPAPLKSRLMQFFTASRVWRAGKQSAMYVLYNFFKHRFERVHRINRKKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRTC_CHLTE (Q9F723)
Other databases:
- EMBL: AF287480 - EMBL: AE006470 - RefSeq: NP_661205.1 - GeneID: 1007961 - GenomeReviews: AE006470_GR - KEGG: cte:CT0301 - NMPDR: fig|194439.1.peg.299 - TIGR: CT0301 - HOGENOM: HBG405629 - OMA: GYHDHNL - ProtClustDB: CLSK637270 - BioCyc: CTEP194439:CT_0301-MONOMER - GO: GO:0015979 - InterPro: IPR010791
Pfam domain/function: PF07143 CrtC
EC number: NA
Molecular weight: Translated: 44955; Mature: 44955
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITTDSLQQAWHRLDAPGSYEWWYFDAEDESEGISVVFIWFVGFAFSPYYLSHYEEWKA CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHH HRRDDQPYPLDYGGFSFQLYQDGRETINFIKEGGRELFASEDGGIGVRFEGNRFVYDPLR HCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEECCCCCCEEEEECCCEEEECCCC DEYRLSIDFSFPARDRSVQASFSFRPLHRFDYHFDTDLHAGVDFRHQWVLSVPKAEVHGL CCEEEEEEEECCCCCCCEEEEECCCCHHHCCCEECCCCCCCCCCCEEEEEECCHHHHCCE LDITSLSSDKRQVLQFRGRGYHDHNLGTVPMYESIDRWYWGRTFSRRCDLIYYVVFLRGC EEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC SAEPQAVLMLLDHKTGRQSTFDAVRVSESRFTRGLFAPVHGKTLRLEAEGVSVEVQHQKA CCCCCEEEEEEECCCCCCCHHHHHEECHHHHHCCCCCCCCCCEEEEEECCCEEEEEHHHC LDTGPFYLRYTSLLSMMIGEEAQEEVRGISEFLNPAPLKSRLMQFFTASRVWRAGKQSAM CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH YVLYNFFKHRFERVHRINRKKF HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNITTDSLQQAWHRLDAPGSYEWWYFDAEDESEGISVVFIWFVGFAFSPYYLSHYEEWKA CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHH HRRDDQPYPLDYGGFSFQLYQDGRETINFIKEGGRELFASEDGGIGVRFEGNRFVYDPLR HCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEECCCCCCEEEEECCCEEEECCCC DEYRLSIDFSFPARDRSVQASFSFRPLHRFDYHFDTDLHAGVDFRHQWVLSVPKAEVHGL CCEEEEEEEECCCCCCCEEEEECCCCHHHCCCEECCCCCCCCCCCEEEEEECCHHHHCCE LDITSLSSDKRQVLQFRGRGYHDHNLGTVPMYESIDRWYWGRTFSRRCDLIYYVVFLRGC EEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC SAEPQAVLMLLDHKTGRQSTFDAVRVSESRFTRGLFAPVHGKTLRLEAEGVSVEVQHQKA CCCCCEEEEEEECCCCCCCHHHHHEECHHHHHCCCCCCCCCCEEEEEECCCEEEEEHHHC LDTGPFYLRYTSLLSMMIGEEAQEEVRGISEFLNPAPLKSRLMQFFTASRVWRAGKQSAM CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH YVLYNFFKHRFERVHRINRKKF HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10976061; 12093901