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The map label for this gene is petC

Identifier: 21673141

GI number: 21673141

Start: 313647

End: 314192

Strand: Direct

Name: petC

Synonym: CT0302

Alternate gene names: 21673141

Gene position: 313647-314192 (Clockwise)

Preceding gene: 21673140

Following gene: 21673142

Centisome position: 14.55

GC content: 55.49

Gene sequence:

>546_bases
ATGGCGCAAACTGGTAATTTCAAAAGCCCGGCAAGAATGAGTTCGCTGGGTCAGGGAGCCGCTCCCGCTTCAGCCGGTGC
GGTTACCGGCGGCAAACCTCGTGAAGAGGGGCTCAAAGGAGTCGATTTCGAACGCAGAGGTTTTCTGCAAAAGATTGTCG
GCGGAGTGGGCGCTGTCGTTGCAGTCAGCACGCTCTATCCGGTTGTCAGGTACATTGTTCCGCCAGCCAAAAAGATCAAG
ATCGTCAACGAGCTTGCTGTCGGTCCGGCATCGGATGTTCCGAACGGCACGGGAAAAATTTACCAGTTCAATGACGACAA
GGTTATCGTGGTCAATCATGGGGGCTCCCTGACAGCGGTCAGCGCCATCTGCACGCACCTTGGCTGCCTGGTGCACTGGG
ATGAAGCCGCTGACATGATTGCGTGCCCCTGCCACGGCGCAAAGTACACGCAGGATGGCAAGATCATCTCCGGACCTCAG
CCCTTGCCGCTGAAGCAGTACAAGGTAAAGATTGAGGACGGTAAGATTGTTGTTTCGATAGCGTAA

Upstream 100 bases:

>100_bases
CCTGAACAAGGGCACATTCCGGTGAAGTATTCACGAGATGCCGTCAGGCGGTTGATGCTTTCTTGATTCATACACCTCAA
GTTATTTAAAGGAGATAGTA

Downstream 100 bases:

>100_bases
TTATCCAATACCTGAAACTCAAGGGAGTCAACTCATATGGCTGAAAATACCCAAAATCCGGCCGCAGGTACTGCACCTGC
CAAGCCGAAACCGGCGGTCC

Product: cytochrome b6-f complex, iron-sulfur subunit

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAQTGNFKSPARMSSLGQGAAPASAGAVTGGKPREEGLKGVDFERRGFLQKIVGGVGAVVAVSTLYPVVRYIVPPAKKIK
IVNELAVGPASDVPNGTGKIYQFNDDKVIVVNHGGSLTAVSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQ
PLPLKQYKVKIEDGKIVVSIA

Sequences:

>Translated_181_residues
MAQTGNFKSPARMSSLGQGAAPASAGAVTGGKPREEGLKGVDFERRGFLQKIVGGVGAVVAVSTLYPVVRYIVPPAKKIK
IVNELAVGPASDVPNGTGKIYQFNDDKVIVVNHGGSLTAVSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQ
PLPLKQYKVKIEDGKIVVSIA
>Mature_180_residues
AQTGNFKSPARMSSLGQGAAPASAGAVTGGKPREEGLKGVDFERRGFLQKIVGGVGAVVAVSTLYPVVRYIVPPAKKIKI
VNELAVGPASDVPNGTGKIYQFNDDKVIVVNHGGSLTAVSAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQP
LPLKQYKVKIEDGKIVVSIA

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UCRI_CHLTE (Q9F722)

Other databases:

- EMBL:   AF287480
- EMBL:   AE006470
- RefSeq:   NP_661206.1
- ProteinModelPortal:   Q9F722
- SMR:   Q9F722
- GeneID:   1007962
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0302
- NMPDR:   fig|194439.1.peg.300
- TIGR:   CT0302
- HOGENOM:   HBG668715
- OMA:   TGNFKSP
- ProtClustDB:   CLSK637271
- BioCyc:   CTEP194439:CT_0302-MONOMER
- BRENDA:   1.10.99.1
- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- Gene3D:   G3DSA:2.102.10.10
- PANTHER:   PTHR10134
- PRINTS:   PR00162

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske; SSF50022 Rieske_dom

EC number: =1.10.99.1

Molecular weight: Translated: 18864; Mature: 18733

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS51296 RIESKE; PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x403bdda4)-; HASH(0x403c7ddc)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTGNFKSPARMSSLGQGAAPASAGAVTGGKPREEGLKGVDFERRGFLQKIVGGVGAVV
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVSTLYPVVRYIVPPAKKIKIVNELAVGPASDVPNGTGKIYQFNDDKVIVVNHGGSLTAV
HHHHHHHHHHHHCCCHHHEEEHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHHH
SAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGKIVVSI
HHHHHHHHHEEEECCCCCEEEECCCCCEECCCCEEECCCCCCCCCCEEEEEECCEEEEEE
A
H
>Mature Secondary Structure 
AQTGNFKSPARMSSLGQGAAPASAGAVTGGKPREEGLKGVDFERRGFLQKIVGGVGAVV
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
AVSTLYPVVRYIVPPAKKIKIVNELAVGPASDVPNGTGKIYQFNDDKVIVVNHGGSLTAV
HHHHHHHHHHHHCCCHHHEEEHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHHH
SAICTHLGCLVHWDEAADMIACPCHGAKYTQDGKIISGPQPLPLKQYKVKIEDGKIVVSI
HHHHHHHHHEEEECCCCCEEEECCCCCEECCCCEEECCCCCCCCCCEEEEEECCEEEEEE
A
H

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901