| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673131
Identifier: 21673131
GI number: 21673131
Start: 304046
End: 304822
Strand: Reverse
Name: 21673131
Synonym: CT0292
Alternate gene names: NA
Gene position: 304822-304046 (Counterclockwise)
Preceding gene: 21673134
Following gene: 21673130
Centisome position: 14.15
GC content: 54.95
Gene sequence:
>777_bases TTGCAAACCCTCTCCGAAGCCATCGATGATCACCTCCCGCACCTGACCTCGCAGCTCCCCGGCGCTGGTATCGACGCTCA CCCGGAGGTAATGCTCACTGTATCCGCTCCAGCGCACTGCTCCTCCCGGAAGCGCCGAGGCCTCCTCGAACAACACTTTC AGGGTACTACCGATAAACGCTTCGGCAAAGCGCCGTTCGATCCGTTCGCCGATCACGCCAAGCCTGGCCGCTCGCGACGA GCTTTCAGCGGAAGGTATGCGAATCAGCTTTTTTTCAGCTATTTCGGCAAAAAGCTTCGTGCCTGGCCGTGGCGAACAGG TGAAAACGTGCAGATAGGCAACCGGCAACTCTTCGATAAAACGGCACATCTCTTCAAAATCGCGCTCGCTTTCGCCAGGA TAACCAACCATCACATCGGCACCGATAGCGCACCCCCTGATCAAGGAGAGTGCTTTCATAAGCCGCTCGCGATAAAATGC TGTGTCGTAATGCCGCCTCATTGCCCGAAGCACAGTATCGGAGCCACTCTGCAACGGCAGATGGAAATGGGGCATGATCT TGCCGGAAGCTGCAACAATATCGATCAACTCGTCATCGAGCAGCTGTGGTTCCACCGAGCTTATTCGAATCCTGCTGACA TCAATCGTTTCGAGACGCCGGAGCAAACCGGACAGGCGGGTATCTCCATCCTGGTAATCGCCAATATTGATACCGGTAAG CACGATTTCACGATAACCGGCATCAGCAATTTTTTGAGCCCTATCGAGCACCGTTGA
Upstream 100 bases:
>100_bases TGATTTGGTGAAAACTGCCAGAAACGGGGCACCACCGACGCCAGACCTCGGAAAGACGCCTTCTGCTTGTAAAAATTTAA GATAAGAGTCTGCCATGTAA
Downstream 100 bases:
>100_bases AAGAGACACCGAGCGTGAACGCCCCCTCGCCAGAGGAATCGAACAATAAGCGCAACCAAAACTGCAACCATCCTGGATTT TCAGAAAAGCTCTGGTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MQTLSEAIDDHLPHLTSQLPGAGIDAHPEVMLTVSAPAHCSSRKRRGLLEQHFQGTTDKRFGKAPFDPFADHAKPGRSRR AFSGRYANQLFFSYFGKKLRAWPWRTGENVQIGNRQLFDKTAHLFKIALAFARITNHHIGTDSAPPDQGECFHKPLAIKC CVVMPPHCPKHSIGATLQRQMEMGHDLAGSCNNIDQLVIEQLWFHRAYSNPADINRFETPEQTGQAGISILVIANIDTGK HDFTITGISNFLSPIEHR
Sequences:
>Translated_258_residues MQTLSEAIDDHLPHLTSQLPGAGIDAHPEVMLTVSAPAHCSSRKRRGLLEQHFQGTTDKRFGKAPFDPFADHAKPGRSRR AFSGRYANQLFFSYFGKKLRAWPWRTGENVQIGNRQLFDKTAHLFKIALAFARITNHHIGTDSAPPDQGECFHKPLAIKC CVVMPPHCPKHSIGATLQRQMEMGHDLAGSCNNIDQLVIEQLWFHRAYSNPADINRFETPEQTGQAGISILVIANIDTGK HDFTITGISNFLSPIEHR >Mature_258_residues MQTLSEAIDDHLPHLTSQLPGAGIDAHPEVMLTVSAPAHCSSRKRRGLLEQHFQGTTDKRFGKAPFDPFADHAKPGRSRR AFSGRYANQLFFSYFGKKLRAWPWRTGENVQIGNRQLFDKTAHLFKIALAFARITNHHIGTDSAPPDQGECFHKPLAIKC CVVMPPHCPKHSIGATLQRQMEMGHDLAGSCNNIDQLVIEQLWFHRAYSNPADINRFETPEQTGQAGISILVIANIDTGK HDFTITGISNFLSPIEHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28838; Mature: 28838
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLSEAIDDHLPHLTSQLPGAGIDAHPEVMLTVSAPAHCSSRKRRGLLEQHFQGTTDKR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC FGKAPFDPFADHAKPGRSRRAFSGRYANQLFFSYFGKKLRAWPWRTGENVQIGNRQLFDK CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHH TAHLFKIALAFARITNHHIGTDSAPPDQGECFHKPLAIKCCVVMPPHCPKHSIGATLQRQ HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCHHHHHHHHHH MEMGHDLAGSCNNIDQLVIEQLWFHRAYSNPADINRFETPEQTGQAGISILVIANIDTGK HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCC HDFTITGISNFLSPIEHR CCEEEECHHHHHHHHCCC >Mature Secondary Structure MQTLSEAIDDHLPHLTSQLPGAGIDAHPEVMLTVSAPAHCSSRKRRGLLEQHFQGTTDKR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC FGKAPFDPFADHAKPGRSRRAFSGRYANQLFFSYFGKKLRAWPWRTGENVQIGNRQLFDK CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHH TAHLFKIALAFARITNHHIGTDSAPPDQGECFHKPLAIKCCVVMPPHCPKHSIGATLQRQ HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCHHHHHHHHHH MEMGHDLAGSCNNIDQLVIEQLWFHRAYSNPADINRFETPEQTGQAGISILVIANIDTGK HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCCC HDFTITGISNFLSPIEHR CCEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA