| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673115
Identifier: 21673115
GI number: 21673115
Start: 287878
End: 288366
Strand: Reverse
Name: 21673115
Synonym: CT0276
Alternate gene names: NA
Gene position: 288366-287878 (Counterclockwise)
Preceding gene: 21673116
Following gene: 21673114
Centisome position: 13.38
GC content: 51.94
Gene sequence:
>489_bases ATGGGAGTGCTCTGGTGGCAAAACTACGTCAATCAACGTTACCAGTCGGTTGAAATCACCCGATTCTATAGCGGAACCAG CCCGCGTGGGGGAAACAAGCTGGCGCTGACTGATCAGCAAAAAACGGCATTCAGAAAACTCCGACAGGAACATTTCCGCA AGACCATGCCCGCTGTGCAGAAGATTATCGAATTCAAAAAGGAGATGATCTCCGAAGCGGTCAAGCCTGATCCCGACCTG CAGAAACTTTCAGCCATCGCAGACAGCCTGGGCAAACGCCAGGCGTGGCTCGAAAAGGATCTTGCCCTCCATTTCCATGA ACTTGCCATGCTCTGCACACTAACCCAACGAGATTCCCTGAAAAAGCTGCTCAGCAATATCTACACCGTCAGGTACCAGA AAATGACTTTATGGAAAGGCCGACCCCATCGGGAAGATCGGGAAGACAATCATCGAGGCCCAATCCCACCATCGGCTCCT GAACCCTGA
Upstream 100 bases:
>100_bases TTGTGGAATGAATTTTTAGTGGTTACCGATGGATTTTCTCTCTTCCAAGCGCTTCGTCACGACAGCCCTGGTGCTTCTGG TCATACTCAACATCACCCTG
Downstream 100 bases:
>100_bases TAATCCGGTAACAGGCATGACTGTCCAGCAACATTTCAAGTGGCGTGTCTTCATCAGCACAGGGCTGTTGTTGACCTTCC TCGTGATGCTCATCTCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGVLWWQNYVNQRYQSVEITRFYSGTSPRGGNKLALTDQQKTAFRKLRQEHFRKTMPAVQKIIEFKKEMISEAVKPDPDL QKLSAIADSLGKRQAWLEKDLALHFHELAMLCTLTQRDSLKKLLSNIYTVRYQKMTLWKGRPHREDREDNHRGPIPPSAP EP
Sequences:
>Translated_162_residues MGVLWWQNYVNQRYQSVEITRFYSGTSPRGGNKLALTDQQKTAFRKLRQEHFRKTMPAVQKIIEFKKEMISEAVKPDPDL QKLSAIADSLGKRQAWLEKDLALHFHELAMLCTLTQRDSLKKLLSNIYTVRYQKMTLWKGRPHREDREDNHRGPIPPSAP EP >Mature_161_residues GVLWWQNYVNQRYQSVEITRFYSGTSPRGGNKLALTDQQKTAFRKLRQEHFRKTMPAVQKIIEFKKEMISEAVKPDPDLQ KLSAIADSLGKRQAWLEKDLALHFHELAMLCTLTQRDSLKKLLSNIYTVRYQKMTLWKGRPHREDREDNHRGPIPPSAPE P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18990; Mature: 18859
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLWWQNYVNQRYQSVEITRFYSGTSPRGGNKLALTDQQKTAFRKLRQEHFRKTMPAVQ CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH KIIEFKKEMISEAVKPDPDLQKLSAIADSLGKRQAWLEKDLALHFHELAMLCTLTQRDSL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLLSNIYTVRYQKMTLWKGRPHREDREDNHRGPIPPSAPEP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GVLWWQNYVNQRYQSVEITRFYSGTSPRGGNKLALTDQQKTAFRKLRQEHFRKTMPAVQ CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH KIIEFKKEMISEAVKPDPDLQKLSAIADSLGKRQAWLEKDLALHFHELAMLCTLTQRDSL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLLSNIYTVRYQKMTLWKGRPHREDREDNHRGPIPPSAPEP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA