| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673114
Identifier: 21673114
GI number: 21673114
Start: 287022
End: 287861
Strand: Reverse
Name: 21673114
Synonym: CT0275
Alternate gene names: NA
Gene position: 287861-287022 (Counterclockwise)
Preceding gene: 21673115
Following gene: 21673109
Centisome position: 13.36
GC content: 56.67
Gene sequence:
>840_bases ATGACTGTCCAGCAACATTTCAAGTGGCGTGTCTTCATCAGCACAGGGCTGTTGTTGACCTTCCTCGTGATGCTCATCTC AGGCATTGTGCTCTACATCTCGCCCCCGGGCAGGGTAGCAAACTGGACTGACTGGAATATATTCGGACTGACCAAAAAAG GTTGGCAGAACCAGCATGTTGTTTTTGGCTTCGCCTTCATCATCCTGTCGATCTTCCACCTGTTCGTCATCAACTGGAAA GCGTTCCTCTCTTACATCAAGACCAAAGCATCGAAGGGCCTGAACAGCCCCGCAGAACTTGTAACTTCACTCCTTCTTTT TGCCGTACTTGCTGCCGGCACCTTATGGCACTTGCCGCCTTTCGAGCAGATCATCGCCCTTGGCGACCGGCTTTCAGGCT CTTGGGAAAACAAAACCGGCGGCCCACCCGTGCCACACGCCGAAGCGATGCCGCTCGATGAACTCGGCGCGCTGCCGCAG GTGAACGATCCGGCGGAAAAGATGGTGGCAAAACTCCGCGCGGCGGGCATCGAGGTACGTGACACCCGACAGACGCTGAC GGAGATCGCCGACAAAAACGGCGTGAAGGTGGAGAAACTCTACGGCATTATCTCGAAAGGCAAGCAATCCGGTGAACTTC AGGGATCGGGCTGGGGCCGCAAAACACTCACGGAGGCCGCCGAAACCATCGGCGTCTCACCACTCGCACTGCAACAGGCG CTGAAGCAGCAGGGCATCGAGGCCGCGCCGGGAGAGTCGATTCGCGACATCGCCACGAAAAACAGCATGGAGCCCTCCGA ACTGGTCAGCAGGATCAACCGGATGGCTGAAAAACGGTAA
Upstream 100 bases:
>100_bases ACTTTATGGAAAGGCCGACCCCATCGGGAAGATCGGGAAGACAATCATCGAGGCCCAATCCCACCATCGGCTCCTGAACC CTGATAATCCGGTAACAGGC
Downstream 100 bases:
>100_bases GCGGAGATCGAGGACTTCAGCGGCGGGGACAGCAGATCGCGCCGTACAGCTCGGGCCGCCGGTCGGCGAAAATATCGTTG AACTCGTTGAAGCTCTTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTVQQHFKWRVFISTGLLLTFLVMLISGIVLYISPPGRVANWTDWNIFGLTKKGWQNQHVVFGFAFIILSIFHLFVINWK AFLSYIKTKASKGLNSPAELVTSLLLFAVLAAGTLWHLPPFEQIIALGDRLSGSWENKTGGPPVPHAEAMPLDELGALPQ VNDPAEKMVAKLRAAGIEVRDTRQTLTEIADKNGVKVEKLYGIISKGKQSGELQGSGWGRKTLTEAAETIGVSPLALQQA LKQQGIEAAPGESIRDIATKNSMEPSELVSRINRMAEKR
Sequences:
>Translated_279_residues MTVQQHFKWRVFISTGLLLTFLVMLISGIVLYISPPGRVANWTDWNIFGLTKKGWQNQHVVFGFAFIILSIFHLFVINWK AFLSYIKTKASKGLNSPAELVTSLLLFAVLAAGTLWHLPPFEQIIALGDRLSGSWENKTGGPPVPHAEAMPLDELGALPQ VNDPAEKMVAKLRAAGIEVRDTRQTLTEIADKNGVKVEKLYGIISKGKQSGELQGSGWGRKTLTEAAETIGVSPLALQQA LKQQGIEAAPGESIRDIATKNSMEPSELVSRINRMAEKR >Mature_278_residues TVQQHFKWRVFISTGLLLTFLVMLISGIVLYISPPGRVANWTDWNIFGLTKKGWQNQHVVFGFAFIILSIFHLFVINWKA FLSYIKTKASKGLNSPAELVTSLLLFAVLAAGTLWHLPPFEQIIALGDRLSGSWENKTGGPPVPHAEAMPLDELGALPQV NDPAEKMVAKLRAAGIEVRDTRQTLTEIADKNGVKVEKLYGIISKGKQSGELQGSGWGRKTLTEAAETIGVSPLALQQAL KQQGIEAAPGESIRDIATKNSMEPSELVSRINRMAEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30670; Mature: 30539
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQQHFKWRVFISTGLLLTFLVMLISGIVLYISPPGRVANWTDWNIFGLTKKGWQNQHV CCCHHHHEEEEHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHH VFGFAFIILSIFHLFVINWKAFLSYIKTKASKGLNSPAELVTSLLLFAVLAAGTLWHLPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHCCCCC FEQIIALGDRLSGSWENKTGGPPVPHAEAMPLDELGALPQVNDPAEKMVAKLRAAGIEVR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHH DTRQTLTEIADKNGVKVEKLYGIISKGKQSGELQGSGWGRKTLTEAAETIGVSPLALQQA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH LKQQGIEAAPGESIRDIATKNSMEPSELVSRINRMAEKR HHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TVQQHFKWRVFISTGLLLTFLVMLISGIVLYISPPGRVANWTDWNIFGLTKKGWQNQHV CCHHHHEEEEHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEECCCCCCCCCHH VFGFAFIILSIFHLFVINWKAFLSYIKTKASKGLNSPAELVTSLLLFAVLAAGTLWHLPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHCCCCC FEQIIALGDRLSGSWENKTGGPPVPHAEAMPLDELGALPQVNDPAEKMVAKLRAAGIEVR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHH DTRQTLTEIADKNGVKVEKLYGIISKGKQSGELQGSGWGRKTLTEAAETIGVSPLALQQA HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH LKQQGIEAAPGESIRDIATKNSMEPSELVSRINRMAEKR HHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA