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The map label for this gene is yrbH [C]

Identifier: 21673109

GI number: 21673109

Start: 283088

End: 283987

Strand: Reverse

Name: yrbH [C]

Synonym: CT0270

Alternate gene names: 21673109

Gene position: 283987-283088 (Counterclockwise)

Preceding gene: 21673114

Following gene: 21673106

Centisome position: 13.18

GC content: 61.22

Gene sequence:

>900_bases
ATGAGCGAGCGGCTGGACGAGAACTTTTCCAGAGCAATCGATCTGATGCTCGCCTGCACAGGCAAGATCATCATCTCCGG
CATGGGCAAATCGGGCATCATCGGCCAGAAGATCGCGGCGACGCTCTCATCGACCGGCACCACGGCGATTTTCCTCCATC
CGGCGGAAGCAGCGCACGGCGACCTCGGCGTGGTTTCGGAGGGCGACACGGTCATCTGCCTTTCCAAAAGCGGCATGACT
GAGGAGCTGAACTTCATTCTCCCGGCGCTCCGGGAGCGGAAGGCGACCATCATCGCCTTCACCGGCAACCCTCGTTCCTA
CCTCGCGATGAACGCCGACGTGGTGCTCGACACCGGCGTCGAGCAGGAGGCGTGCCCTTACGACCTCGCGCCAACCAGCT
CGACCACGGCGATGCTCGCGATGGGTGACGCGCTGGCGATCTGCCTCATGAAAAAGAAGAACTTCACCGACCAGGAATTC
GCCCTCACCCACCCCAAAGGCTCGCTCGGCAAACAGCTGACGATGCGGGTCGGCGACGTGATGGCCACCGGCGATGCCCT
GCCCGTCGTCAGCGAAGATGCAATGCTCTCGGACCTCATCCTCGAAATGACCTCCAAGCGCTACGGCGTCAGCGGCGTCG
TGGATGCAGAGGGCAAGCTCACCGGCATTTTCACCGACGGCGACTTGCGGCGGCTGGTGCAGACCGGCGAGTCATTTCTC
GACAAAAAAGCGGTCGAGGTGATGACCCCCAACCCGAAAACCGTCGCGCCCGACATGAAGGCCAAAGCCTGCCTCGAACT
TCTCGAAACCCACCGCATCACCCAGCTTATGGTGTGTGATGAAAAGCGCTGTCCGGTGGGGATTGTGCATATCCACGATC
TGGTAACACTGGGGTTGTAG

Upstream 100 bases:

>100_bases
CGCCGCTGCCGAAACCACATGAGCAACGATGAAAGAACAAGCAACCAGCACGCAGGAGGGCAAGGACATCCTTCTGCAGG
AAGCCCAAGCCATCCGCCTG

Downstream 100 bases:

>100_bases
TTTTTCTCAGATCCGTCTGATTCTGACTGATCTGTCTCCCACCAATAAAAAGAGCGCTCGAAAGCGCTCTTTTTTGTAAC
TGGACCGAAAGCCTTCAGGC

Product: carbohydrate isomerase KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHGDLGVVSEGDTVICLSKSGMT
EELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGVEQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEF
ALTHPKGSLGKQLTMRVGDVMATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFL
DKKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL

Sequences:

>Translated_299_residues
MSERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHGDLGVVSEGDTVICLSKSGMT
EELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGVEQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEF
ALTHPKGSLGKQLTMRVGDVMATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFL
DKKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL
>Mature_298_residues
SERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHGDLGVVSEGDTVICLSKSGMTE
ELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGVEQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEFA
LTHPKGSLGKQLTMRVGDVMATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFLD
KKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=299, Percent_Identity=45.819397993311, Blast_Score=271, Evalue=5e-74,
Organism=Escherichia coli, GI87082151, Length=299, Percent_Identity=43.1438127090301, Blast_Score=245, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31950; Mature: 31818

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHG
CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCC
DLGVVSEGDTVICLSKSGMTEELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGV
CEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEECCC
EQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEFALTHPKGSLGKQLTMRVGDV
CCCCCCCCCCCCCCCEEEEECCCHHEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHE
MATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFL
EECCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHH
DKKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHCC
>Mature Secondary Structure 
SERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHG
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCC
DLGVVSEGDTVICLSKSGMTEELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGV
CEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEECCC
EQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEFALTHPKGSLGKQLTMRVGDV
CCCCCCCCCCCCCCCEEEEECCCHHEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHE
MATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFL
EECCCCCCEECCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHH
DKKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]