| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is gmk
Identifier: 21673086
GI number: 21673086
Start: 258269
End: 258856
Strand: Direct
Name: gmk
Synonym: CT0247
Alternate gene names: 21673086
Gene position: 258269-258856 (Clockwise)
Preceding gene: 21673085
Following gene: 21673087
Centisome position: 11.98
GC content: 55.78
Gene sequence:
>588_bases ATGAGCGCAGAACAGGTTTTGGACCAGGGCAGGCTGATCGTCTTTTCCGCGCCTTCCGGCACCGGGAAATCGACGGTTGC AAAACTCGTGATGGAGCGTCTCGGCTCTCTCGAATTTTCTGTTTCGGCTACCACGCGCCAGATGAGAGCTGGCGAGCGCG ATGGCGTCGATTACCACTTTCTCTCCCGCGAAGAGTTTGAGAAAAAGATCGCTGAAAATGGCTTCATCGAACACGAGTTC TTTTTCGGTAACTTCTATGGGACGCTCCTCGACAAGACCATCGATGCGATCAAAGCGGGCCACAATCTGCTTTTCGATCT CGATGTGAAGGGTGCGCTGAACCTCAAGAGAATTTTTGGAGACCAGGCGCTGCTCGTTTTCCTCAAACCCCCAAGCATGG AGGAGCTTGCCCGCCGCCTGCAGGCGCGCGATAGCGAGAGTGCCGAAGCGCTGAAAAGCCGTCTCGAACGAGCGGAGATG GAGCTTTCCCATGCCGGAGAGTTCGATTTTGTCGTGGTCAACGACGATCTCGGGCGCACCGTCGATGCGGTTGCGACGCG GATCGCCGAGTTTCTTCCACAACCATAA
Upstream 100 bases:
>100_bases GCGTCCAAGTCGCAGAATGCCGATATTTCGCAGAAAGTGGTGCATATCAAGGAGGAGCTCGAAAAGGTCAGGGAGCAGTT GCAAAACATCGAATGAGTCT
Downstream 100 bases:
>100_bases CGCACTATTGCCATGTCGGTCAAACCTGTCGATTTGAACAAGCTGAGAAGTACGCATGAAAATCTCTACGAAACCGTTGT AGCCATTTCAAAGAAAGCGA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSAEQVLDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHFLSREEFEKKIAENGFIEHEF FFGNFYGTLLDKTIDAIKAGHNLLFDLDVKGALNLKRIFGDQALLVFLKPPSMEELARRLQARDSESAEALKSRLERAEM ELSHAGEFDFVVVNDDLGRTVDAVATRIAEFLPQP
Sequences:
>Translated_195_residues MSAEQVLDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHFLSREEFEKKIAENGFIEHEF FFGNFYGTLLDKTIDAIKAGHNLLFDLDVKGALNLKRIFGDQALLVFLKPPSMEELARRLQARDSESAEALKSRLERAEM ELSHAGEFDFVVVNDDLGRTVDAVATRIAEFLPQP >Mature_194_residues SAEQVLDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHFLSREEFEKKIAENGFIEHEFF FGNFYGTLLDKTIDAIKAGHNLLFDLDVKGALNLKRIFGDQALLVFLKPPSMEELARRLQARDSESAEALKSRLERAEME LSHAGEFDFVVVNDDLGRTVDAVATRIAEFLPQP
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=172, Percent_Identity=41.8604651162791, Blast_Score=120, Evalue=8e-28, Organism=Homo sapiens, GI4504221, Length=172, Percent_Identity=41.8604651162791, Blast_Score=120, Evalue=8e-28, Organism=Homo sapiens, GI226874831, Length=172, Percent_Identity=41.8604651162791, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI38570142, Length=198, Percent_Identity=32.3232323232323, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI111154074, Length=163, Percent_Identity=30.6748466257669, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI21361598, Length=199, Percent_Identity=26.6331658291457, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI14780902, Length=189, Percent_Identity=28.042328042328, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI261862237, Length=156, Percent_Identity=32.0512820512821, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI119943106, Length=139, Percent_Identity=35.2517985611511, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI119943108, Length=156, Percent_Identity=32.0512820512821, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI52630447, Length=194, Percent_Identity=24.2268041237113, Blast_Score=64, Evalue=6e-11, Organism=Homo sapiens, GI262118263, Length=172, Percent_Identity=27.3255813953488, Blast_Score=64, Evalue=8e-11, Organism=Homo sapiens, GI262118259, Length=172, Percent_Identity=27.3255813953488, Blast_Score=64, Evalue=9e-11, Organism=Homo sapiens, GI262118255, Length=172, Percent_Identity=27.3255813953488, Blast_Score=64, Evalue=9e-11, Organism=Homo sapiens, GI4505237, Length=172, Percent_Identity=27.3255813953488, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1790080, Length=182, Percent_Identity=38.4615384615385, Blast_Score=128, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17508835, Length=174, Percent_Identity=39.6551724137931, Blast_Score=115, Evalue=1e-26, Organism=Caenorhabditis elegans, GI193203132, Length=174, Percent_Identity=39.6551724137931, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6320662, Length=172, Percent_Identity=44.7674418604651, Blast_Score=141, Evalue=5e-35, Organism=Drosophila melanogaster, GI21356141, Length=171, Percent_Identity=40.3508771929825, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI24640542, Length=172, Percent_Identity=30.8139534883721, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI161077626, Length=188, Percent_Identity=29.2553191489362, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI116007136, Length=172, Percent_Identity=30.8139534883721, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI45554489, Length=172, Percent_Identity=30.8139534883721, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI85724806, Length=172, Percent_Identity=30.8139534883721, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI45554481, Length=172, Percent_Identity=30.8139534883721, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_CHLTE (Q8KFS5)
Other databases:
- EMBL: AE006470 - RefSeq: NP_661151.1 - ProteinModelPortal: Q8KFS5 - GeneID: 1007740 - GenomeReviews: AE006470_GR - KEGG: cte:CT0247 - NMPDR: fig|194439.1.peg.245 - TIGR: CT0247 - HOGENOM: HBG671982 - OMA: EWAEFAG - ProtClustDB: PRK00300 - BioCyc: CTEP194439:CT_0247-MONOMER - BRENDA: 2.7.4.8 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 21773; Mature: 21642
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEQVLDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHF CCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCEEE LSREEFEKKIAENGFIEHEFFFGNFYGTLLDKTIDAIKAGHNLLFDLDVKGALNLKRIFG CCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHC DQALLVFLKPPSMEELARRLQARDSESAEALKSRLERAEMELSHAGEFDFVVVNDDLGRT CCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH VDAVATRIAEFLPQP HHHHHHHHHHHCCCC >Mature Secondary Structure SAEQVLDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHF CHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCEEE LSREEFEKKIAENGFIEHEFFFGNFYGTLLDKTIDAIKAGHNLLFDLDVKGALNLKRIFG CCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHC DQALLVFLKPPSMEELARRLQARDSESAEALKSRLERAEMELSHAGEFDFVVVNDDLGRT CCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH VDAVATRIAEFLPQP HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901