Click here to switch to the map view.

The map label for this gene is yloC [H]

Identifier: 21673085

GI number: 21673085

Start: 257377

End: 258264

Strand: Direct

Name: yloC [H]

Synonym: CT0246

Alternate gene names: 21673085

Gene position: 257377-258264 (Clockwise)

Preceding gene: 21673084

Following gene: 21673086

Centisome position: 11.94

GC content: 54.95

Gene sequence:

>888_bases
ATGTTGGAAAGCATGACCGGATACGGCAGCGCCGAGCGTTCGGAAAAAGGCATGAAGGTGCTTGTCGAACTGCGTTCGGT
CAATAATCGTTTTGCCGAAATCGGCGTCAAGCTGCCCAGGCAGTTGCTGTCGTGGGAGCTGGAGGTTAGGGAGCTGATCC
GTGCCAGTTTCCAGCGGGGCAAAATATCGGCGTTTGTCCAGCTTCAGCTCGAAGAGGCCGAAGCGTTGCCGGTGACTGTA
AACCCTTCGAAAGTGAGGGGCTACAAGGCTCTTCTTGAAACCGTCCGCCGGGAGGCGGAAATCGAAGCTCCGGTAACCCT
CGATCATGTGCTTCGTTTTTCCGAGATTTTCGAGCCTGACCACACCATTCTGGAACACCCGGACGAGATCTGGCCTATCG
CTCAGTCGGCACTTATTGAGGCTATCGGCAATCTCAAGGAGATGCGCCGGAAAGAGGGTGAAGAGCTTGCGATTGACTTC
CTGTCGAGGATCGACGAAATCGAGCGCACGCTCAAAGAGATCAAGGAGATTGCCGCTGGTAATCTCGAAACGATCCGCAA
GCGGCTGGCCTCGAAAATCAGCGCCATTGCTGGGTGCGATGTCGAGTACAGCAAGGATCGCCTTGAAATGGAGATCGTCA
TGGCCGCCGAGCGGCTCGACATCACCGAGGAGTGCATCCGCTTCAGCAGCCATAACAAGTTTTTCATCGAAGAGCTGAAC
AACAGTTCGAGCGGCTCGGGCCGCAAGCTCAATTTCCTCCTGCAGGAGCAGCTCCGCGAGGCCAACACTATCGCGTCCAA
GTCGCAGAATGCCGATATTTCGCAGAAAGTGGTGCATATCAAGGAGGAGCTCGAAAAGGTCAGGGAGCAGTTGCAAAACA
TCGAATGA

Upstream 100 bases:

>100_bases
TGCCGATCTCGATCTGCGTAAATAATGGGCTGTATTGTACGCTGGAACCTGCGGGGCCTCTGCTCCGCAGGTATCTTCAA
GAATGTAAGAGGGGACGTGT

Downstream 100 bases:

>100_bases
GTCTATGAGCGCAGAACAGGTTTTGGACCAGGGCAGGCTGATCGTCTTTTCCGCGCCTTCCGGCACCGGGAAATCGACGG
TTGCAAAACTCGTGATGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLESMTGYGSAERSEKGMKVLVELRSVNNRFAEIGVKLPRQLLSWELEVRELIRASFQRGKISAFVQLQLEEAEALPVTV
NPSKVRGYKALLETVRREAEIEAPVTLDHVLRFSEIFEPDHTILEHPDEIWPIAQSALIEAIGNLKEMRRKEGEELAIDF
LSRIDEIERTLKEIKEIAAGNLETIRKRLASKISAIAGCDVEYSKDRLEMEIVMAAERLDITEECIRFSSHNKFFIEELN
NSSSGSGRKLNFLLQEQLREANTIASKSQNADISQKVVHIKEELEKVREQLQNIE

Sequences:

>Translated_295_residues
MLESMTGYGSAERSEKGMKVLVELRSVNNRFAEIGVKLPRQLLSWELEVRELIRASFQRGKISAFVQLQLEEAEALPVTV
NPSKVRGYKALLETVRREAEIEAPVTLDHVLRFSEIFEPDHTILEHPDEIWPIAQSALIEAIGNLKEMRRKEGEELAIDF
LSRIDEIERTLKEIKEIAAGNLETIRKRLASKISAIAGCDVEYSKDRLEMEIVMAAERLDITEECIRFSSHNKFFIEELN
NSSSGSGRKLNFLLQEQLREANTIASKSQNADISQKVVHIKEELEKVREQLQNIE
>Mature_295_residues
MLESMTGYGSAERSEKGMKVLVELRSVNNRFAEIGVKLPRQLLSWELEVRELIRASFQRGKISAFVQLQLEEAEALPVTV
NPSKVRGYKALLETVRREAEIEAPVTLDHVLRFSEIFEPDHTILEHPDEIWPIAQSALIEAIGNLKEMRRKEGEELAIDF
LSRIDEIERTLKEIKEIAAGNLETIRKRLASKISAIAGCDVEYSKDRLEMEIVMAAERLDITEECIRFSSHNKFFIEELN
NSSSGSGRKLNFLLQEQLREANTIASKSQNADISQKVVHIKEELEKVREQLQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=298, Percent_Identity=29.1946308724832, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33715; Mature: 33715

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESMTGYGSAERSEKGMKVLVELRSVNNRFAEIGVKLPRQLLSWELEVRELIRASFQRG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KISAFVQLQLEEAEALPVTVNPSKVRGYKALLETVRREAEIEAPVTLDHVLRFSEIFEPD
CEEEHEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
HTILEHPDEIWPIAQSALIEAIGNLKEMRRKEGEELAIDFLSRIDEIERTLKEIKEIAAG
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLETIRKRLASKISAIAGCDVEYSKDRLEMEIVMAAERLDITEECIRFSSHNKFFIEELN
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHCC
NSSSGSGRKLNFLLQEQLREANTIASKSQNADISQKVVHIKEELEKVREQLQNIE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLESMTGYGSAERSEKGMKVLVELRSVNNRFAEIGVKLPRQLLSWELEVRELIRASFQRG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KISAFVQLQLEEAEALPVTVNPSKVRGYKALLETVRREAEIEAPVTLDHVLRFSEIFEPD
CEEEHEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
HTILEHPDEIWPIAQSALIEAIGNLKEMRRKEGEELAIDFLSRIDEIERTLKEIKEIAAG
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLETIRKRLASKISAIAGCDVEYSKDRLEMEIVMAAERLDITEECIRFSSHNKFFIEELN
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHCC
NSSSGSGRKLNFLLQEQLREANTIASKSQNADISQKVVHIKEELEKVREQLQNIE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]