| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21673038
Identifier: 21673038
GI number: 21673038
Start: 208385
End: 209176
Strand: Direct
Name: 21673038
Synonym: CT0197
Alternate gene names: NA
Gene position: 208385-209176 (Clockwise)
Preceding gene: 21673036
Following gene: 21673039
Centisome position: 9.67
GC content: 62.5
Gene sequence:
>792_bases ATGCTGCAAAACACGATGAATAAAAACGATGCCGCCGCTCAGGCGTTGAGCAAGGTGCCGCAGGTGACGCTGATGTTCTG GGCGATAAAGATTCTGGCGACCACGCTTGGCGAGACTGGCGGGGATGCGGTCACCATGTCGATGAAGCTCGGGTACGCCG AGGGGAGCCTGATTTTCCTCGCCTTTTTCGCTGTGGCGCTGCTCTTCCAGGTTTTCTCCGTCGGGTATCATCCGGCGCGG TACTGGGCGGTGGTGGTCGCCACGACGACTGTCGGCACCACCATGTCGGACTACCTCGATCGCACGCTCGGCCTCGGCTA CGTCAACTCATCGGCGATTCTTTTGCTTGGCGTGCTGCTGGTGCTGTTTGCGTGGAACCGGATCATGGGCAGGATCGAGT TCGAGGGGATTGCCGACCGGCGCGACGAGCTTTTTTACTGGCTGACCATTCTGGTCTCCAACACGCTCGGCACGGCGCTC GGCGACTTCGTGGCTGACGATGTCGGTCTCGGCTTCCAGCTCGGTGCGTTGCTCTTTGGCGTGCTGATTGTCGCGGTCGC CATCGCGTATTACAAGACGAGCATTTCGCCCAACATCCTTTTTTGGGCGGCCTACGTGCTGACCCGCCCGCTCGGCGCGA CGCTTGGCGACACGCTCACCAAGCCGCTCGCGCATGGCGGCCTGTCGCTCGGCCGCATCAGCTCGTCGCTGGTGATTCTC GCGCTCATGGTGGCGGCGATCACGCTCAACCACCGGGCCGAACAGCGCCGCGCCGTGGCGGTCGCATCCTGA
Upstream 100 bases:
>100_bases AACTTGCGGTAAGGAAGTGGTGCCGCTAACTCTGCGCTAATTCTCTTTTCGTATCCTGAATCATTCGTTTCATGATCCAA TTGACAGAGGAGATAACGTA
Downstream 100 bases:
>100_bases ATGAGCCGGCGATGAATTTGTGGCGGCTGTTCCGGTGTTTGAAGAGGTTAAACGGGCGTGGTGGTTGTCAAATCAAACCA GATGGAGATGAAGCAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLQNTMNKNDAAAQALSKVPQVTLMFWAIKILATTLGETGGDAVTMSMKLGYAEGSLIFLAFFAVALLFQVFSVGYHPAR YWAVVVATTTVGTTMSDYLDRTLGLGYVNSSAILLLGVLLVLFAWNRIMGRIEFEGIADRRDELFYWLTILVSNTLGTAL GDFVADDVGLGFQLGALLFGVLIVAVAIAYYKTSISPNILFWAAYVLTRPLGATLGDTLTKPLAHGGLSLGRISSSLVIL ALMVAAITLNHRAEQRRAVAVAS
Sequences:
>Translated_263_residues MLQNTMNKNDAAAQALSKVPQVTLMFWAIKILATTLGETGGDAVTMSMKLGYAEGSLIFLAFFAVALLFQVFSVGYHPAR YWAVVVATTTVGTTMSDYLDRTLGLGYVNSSAILLLGVLLVLFAWNRIMGRIEFEGIADRRDELFYWLTILVSNTLGTAL GDFVADDVGLGFQLGALLFGVLIVAVAIAYYKTSISPNILFWAAYVLTRPLGATLGDTLTKPLAHGGLSLGRISSSLVIL ALMVAAITLNHRAEQRRAVAVAS >Mature_263_residues MLQNTMNKNDAAAQALSKVPQVTLMFWAIKILATTLGETGGDAVTMSMKLGYAEGSLIFLAFFAVALLFQVFSVGYHPAR YWAVVVATTTVGTTMSDYLDRTLGLGYVNSSAILLLGVLLVLFAWNRIMGRIEFEGIADRRDELFYWLTILVSNTLGTAL GDFVADDVGLGFQLGALLFGVLIVAVAIAYYKTSISPNILFWAAYVLTRPLGATLGDTLTKPLAHGGLSLGRISSSLVIL ALMVAAITLNHRAEQRRAVAVAS
Specific function: Unknown
COG id: COG4705
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28247; Mature: 28247
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNTMNKNDAAAQALSKVPQVTLMFWAIKILATTLGETGGDAVTMSMKLGYAEGSLIFL CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH AFFAVALLFQVFSVGYHPARYWAVVVATTTVGTTMSDYLDRTLGLGYVNSSAILLLGVLL HHHHHHHHHHHHHCCCCCHHHEEEEEEHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH VLFAWNRIMGRIEFEGIADRRDELFYWLTILVSNTLGTALGDFVADDVGLGFQLGALLFG HHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VLIVAVAIAYYKTSISPNILFWAAYVLTRPLGATLGDTLTKPLAHGGLSLGRISSSLVIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH ALMVAAITLNHRAEQRRAVAVAS HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLQNTMNKNDAAAQALSKVPQVTLMFWAIKILATTLGETGGDAVTMSMKLGYAEGSLIFL CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH AFFAVALLFQVFSVGYHPARYWAVVVATTTVGTTMSDYLDRTLGLGYVNSSAILLLGVLL HHHHHHHHHHHHHCCCCCHHHEEEEEEHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH VLFAWNRIMGRIEFEGIADRRDELFYWLTILVSNTLGTALGDFVADDVGLGFQLGALLFG HHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VLIVAVAIAYYKTSISPNILFWAAYVLTRPLGATLGDTLTKPLAHGGLSLGRISSSLVIL HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH ALMVAAITLNHRAEQRRAVAVAS HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA