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The map label for this gene is qseB [H]

Identifier: 21673035

GI number: 21673035

Start: 205094

End: 205756

Strand: Direct

Name: qseB [H]

Synonym: CT0194

Alternate gene names: 21673035

Gene position: 205094-205756 (Clockwise)

Preceding gene: 21673034

Following gene: 21673036

Centisome position: 9.52

GC content: 66.37

Gene sequence:

>663_bases
ATGCGCGTGCTGCTTGTCGAGGATGATCCCATGATTGCCGAGGCGGTTTCGGTGGCGCTGAAGGATGCGGCGTATGCGGT
GGACTGGGTGCGCGATGGCGAGAAGGCTGCCGACGCGCTTCGTTATGGCGAGCATCAGGCCGTGCTGCTCGACCTGGGGC
TTCCGGGGCGCGGCGGTCTGGAGGTGCTCGCGGCGCTTCGGGAGGGCGGGAGTTCGATTCCCGTCATCATCATCACCGCC
CGCGACGGTCTCGGCGAGCGCATCGCGGGGCTGGATTCGGGCGCGGACGATTATCTCGTCAAGCCGTTTGATCTCGATGA
ACTGCTGGCGCGGCTCCGGGCGGTGATCCGGCGTCAGGGCGGGCAGGCTTCGGGGCTGATCGGCAATGGCCAGATCACGC
TCGATCCCGCCACGCACACAGCATTCTGCGGCGAGGAGCGGGCCGTGCTCAGCTCGCGCGAGTTCGCGGTGCTGCACGCG
CTTCTGCTCCAGCCGGGCCGCATCCTGAGCCGCTCGGCGCTCGAAGAGCGGGTCTATGGCTGGGACGAGGAGGTCGAGAG
CAACGCCATCGATTACCTGATCCACCAGCTCCGCCGCAAGCTCGGCGCGACGAGCATCAAAAACATACGGGGTGCGGGAT
GGATGGTCGAAAAACAGCCATGA

Upstream 100 bases:

>100_bases
GGGGTGGTGGTTTTCTGCCGCTCCTCCGGACCCGGCTCCGGAATTCCTGAATTTCACGATGGGGTAGTTGCCCTGTAAAT
CATCAAAAAAAATAGAAGTT

Downstream 100 bases:

>100_bases
CGCCCTCGCTGCAACGGCGTCTGACCGCGATGCTGGCCGGGGCGATCGTGCTGGCGGCACTGGTCGCGGCGGCGACTTCG
TTCTATTTTTCCTACCGCGA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRVLLVEDDPMIAEAVSVALKDAAYAVDWVRDGEKAADALRYGEHQAVLLDLGLPGRGGLEVLAALREGGSSIPVIIITA
RDGLGERIAGLDSGADDYLVKPFDLDELLARLRAVIRRQGGQASGLIGNGQITLDPATHTAFCGEERAVLSSREFAVLHA
LLLQPGRILSRSALEERVYGWDEEVESNAIDYLIHQLRRKLGATSIKNIRGAGWMVEKQP

Sequences:

>Translated_220_residues
MRVLLVEDDPMIAEAVSVALKDAAYAVDWVRDGEKAADALRYGEHQAVLLDLGLPGRGGLEVLAALREGGSSIPVIIITA
RDGLGERIAGLDSGADDYLVKPFDLDELLARLRAVIRRQGGQASGLIGNGQITLDPATHTAFCGEERAVLSSREFAVLHA
LLLQPGRILSRSALEERVYGWDEEVESNAIDYLIHQLRRKLGATSIKNIRGAGWMVEKQP
>Mature_220_residues
MRVLLVEDDPMIAEAVSVALKDAAYAVDWVRDGEKAADALRYGEHQAVLLDLGLPGRGGLEVLAALREGGSSIPVIIITA
RDGLGERIAGLDSGADDYLVKPFDLDELLARLRAVIRRQGGQASGLIGNGQITLDPATHTAFCGEERAVLSSREFAVLHA
LLLQPGRILSRSALEERVYGWDEEVESNAIDYLIHQLRRKLGATSIKNIRGAGWMVEKQP

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=45.8333333333333, Blast_Score=199, Evalue=1e-52,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=41.2037037037037, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=35.3211009174312, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=33.4821428571429, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=34.0909090909091, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=32.1428571428571, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1789809, Length=205, Percent_Identity=36.0975609756098, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=33.6363636363636, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=30.9090909090909, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786911, Length=208, Percent_Identity=36.0576923076923, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=33.7719298245614, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=29.2792792792793, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=26.8722466960352, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788521, Length=165, Percent_Identity=32.1212121212121, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790299, Length=121, Percent_Identity=33.8842975206612, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=30.8411214953271, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23832; Mature: 23832

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLVEDDPMIAEAVSVALKDAAYAVDWVRDGEKAADALRYGEHQAVLLDLGLPGRGGL
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHH
EVLAALREGGSSIPVIIITARDGLGERIAGLDSGADDYLVKPFDLDELLARLRAVIRRQG
HHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
GQASGLIGNGQITLDPATHTAFCGEERAVLSSREFAVLHALLLQPGRILSRSALEERVYG
CCCCCEEECCEEEECCCCCCHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
WDEEVESNAIDYLIHQLRRKLGATSIKNIRGAGWMVEKQP
CCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCC
>Mature Secondary Structure
MRVLLVEDDPMIAEAVSVALKDAAYAVDWVRDGEKAADALRYGEHQAVLLDLGLPGRGGL
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHH
EVLAALREGGSSIPVIIITARDGLGERIAGLDSGADDYLVKPFDLDELLARLRAVIRRQG
HHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
GQASGLIGNGQITLDPATHTAFCGEERAVLSSREFAVLHALLLQPGRILSRSALEERVYG
CCCCCEEECCEEEECCCCCCHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
WDEEVESNAIDYLIHQLRRKLGATSIKNIRGAGWMVEKQP
CCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]