| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is fusA-2 [H]
Identifier: 21672985
GI number: 21672985
Start: 144731
End: 146809
Strand: Reverse
Name: fusA-2 [H]
Synonym: CT0144
Alternate gene names: 21672985
Gene position: 146809-144731 (Counterclockwise)
Preceding gene: 21672998
Following gene: 21672984
Centisome position: 6.81
GC content: 56.13
Gene sequence:
>2079_bases ATGCAAGCTGTTCCAACGGATCAATTGAGGAACATTGTCGTTACCGGCCATTCCGGCACCGGAAAAACCATGCTGTGCGA ATCACTCGCCCTCTGCATGGGTGTCATCAACCGGCTCGGCAGCATAGAGGATGGCACTACCCTGTCAGATTACGCTTCCG ACGAGACAGAGAGAAAGCACAGCCTGAACACCAGTCTCATCCACGGCGTATGGAACGAGAAGAAGATCAATATTATCGAT ACTCCAGGCCTGCTTGATTTTCACGGAGACGTCAAATCGGCCATGCGCGTTGCCGATACGGTGCTGATCACGGTCAACGC GGCCACGGGCGTGGAGGTCGGCACAGACACGGTGTGGGAGTACACCAAGGAGTACTACAAGCCGACCATGTTCGTGCTTA CCAAGCTCGATGCCGATCGCGCGGATTACAACGCAACCATCGAAGCCCTGCGCGACCACTTCGGCCATCTGGTTACGCCA ATCCAGTTCCCAGCCGAGGAGGGATTCGGCCACCATATCCTGATCGACGTCCTGCTGATGAAGCAGATCGAGTTCAGCCC CGACAAACCTGGCAGCATGGTGATTTCAGAAATTCATGACCTGTACCGGAAAAAGGCGGAGGTGCTTCACCAGCAACTGG TCGAAGCGGTCGCCGAAACCGACGAGGAGCTGATGAACCACTTCTTCGAAGAGGGTACGCTCACCGAAGACGAGCTTCGG GCCGGCATCAAATCGGCTCTCGTCACCCGCACCTTCTTCCCTGTTTTCTGCACCTCACCGCTCCATCTCATCGGCTCCGA ACGGCTTCTGAACGCTATCGTCAACCTCTGTCCGTCGCCCATCGAGCGCGGGCCGGAACATGCGTTCTGCTCGGTGATGA ACGACGAAAAGCTGCTGCCTCCCGATCCCGACGGATCGACCATTGCCTTTATTTTCAAGACCATGTCGGAACCGAGAGTG GGCGAAATCTCCTACATTCGCGTCTACTCGGGCCACATCGAGAGTGGGCACGAACTGATCGACGTCCAGACCGGTCAGCT CGAAAAGCTCGGACAGGTCTACACAATGCTGGGGCAGAAGAAGATTCCGGTTGACAAGCTGCTGGCAGGCGATATCGGCA TGGTGGTCAAGCTGAAAAACTCGCACACCAACGACACGCTCGCCGACAAAGGGGTGAATTGCCGGATCAGCCCGATCATC TTTCCGGAGCCGGTACTCTCCTCGGCCATCGTGCCGGTCACGCAGGGCGACGAAGAGAAGATATCCGCCGGCTTGCACCA TCTTCACGAAGAAGATCCGAGCTTCGCCATCGAGCATGATGTCGAGTTCAACCAGACCATTCTCAAAACACTTGGGGAGA CGCATCTCGACATCATCATCAGTCGCCTGCGAAACAAGTTCAATATCCAGGTAGAGGTAGCGCCTGTAAGGATTCCCTAT CGTGAAACCATCAGGGTAAGTGCGTCAGCGCAGGGAAAATTCAAGAAACAATCAGGCGGCCGCGGCCAGTACGGCGATGT CTGGATTCGCATCGAGCCTCTGGAGCGGGGCTCGGGCTTCGAGTTCGCCAGTGAAGTGGTCGGCGGCGTGGTCCCAACGC GCTACATCCCGGCGGTCGAAAAAGGATTGCGTGAATCGATCGCTGAGGGAAGTCTTGCCGGCTACCCCGTGGTCGATCTG AAAGCGGTGGTTTATGACGGATCGCATCATCCGGTGGACAGCTCGGAATATGCATTCAAGATCGCCGCCAGCATGGCATT CAAGGCCGCTGTCGAAAAGGCAAAACCGCTGATTCTCGAACCGATCTACTCGCTGACCGTACAAACCCCCGACCAGTTCA CGGGCGAAATCGTGGGAGACATATCGAGCAAGCGGGGCAGGATTCTCGGCATGGACACTGAATCCCGATTCCAGGTCATC AAGGCGCTCATTCCACAGGCTTCACTTTCGACATTCCATCACGCACTGACAAGGCTGACCCAGAGCCGCGCTCGATACAA CTATACCTTCAGCCATTACGAAGAAGCCCCGGCCGAAATAGCAAACCAGCTCATCGCGGAGAAAACCGCAAAACAGTAA
Upstream 100 bases:
>100_bases TTGGCGCCCGAGGCTGACTTCCCGTGTGATGCTCTTTCAGGCGAGAAACCGGCAAAAGCAGGCGGCTCCGTATAAATCAA TCCAAGAAAGGAGTACTGAC
Downstream 100 bases:
>100_bases AAAAAAAGGGGCGTGGCAGCATCAATCATCTCATCATGCTGCCATGTCCCCCTCGTCTCCGCTATTGTAGAACCCCCGTG CCCAAAACAGTAAAGCCCGT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MQAVPTDQLRNIVVTGHSGTGKTMLCESLALCMGVINRLGSIEDGTTLSDYASDETERKHSLNTSLIHGVWNEKKINIID TPGLLDFHGDVKSAMRVADTVLITVNAATGVEVGTDTVWEYTKEYYKPTMFVLTKLDADRADYNATIEALRDHFGHLVTP IQFPAEEGFGHHILIDVLLMKQIEFSPDKPGSMVISEIHDLYRKKAEVLHQQLVEAVAETDEELMNHFFEEGTLTEDELR AGIKSALVTRTFFPVFCTSPLHLIGSERLLNAIVNLCPSPIERGPEHAFCSVMNDEKLLPPDPDGSTIAFIFKTMSEPRV GEISYIRVYSGHIESGHELIDVQTGQLEKLGQVYTMLGQKKIPVDKLLAGDIGMVVKLKNSHTNDTLADKGVNCRISPII FPEPVLSSAIVPVTQGDEEKISAGLHHLHEEDPSFAIEHDVEFNQTILKTLGETHLDIIISRLRNKFNIQVEVAPVRIPY RETIRVSASAQGKFKKQSGGRGQYGDVWIRIEPLERGSGFEFASEVVGGVVPTRYIPAVEKGLRESIAEGSLAGYPVVDL KAVVYDGSHHPVDSSEYAFKIAASMAFKAAVEKAKPLILEPIYSLTVQTPDQFTGEIVGDISSKRGRILGMDTESRFQVI KALIPQASLSTFHHALTRLTQSRARYNYTFSHYEEAPAEIANQLIAEKTAKQ
Sequences:
>Translated_692_residues MQAVPTDQLRNIVVTGHSGTGKTMLCESLALCMGVINRLGSIEDGTTLSDYASDETERKHSLNTSLIHGVWNEKKINIID TPGLLDFHGDVKSAMRVADTVLITVNAATGVEVGTDTVWEYTKEYYKPTMFVLTKLDADRADYNATIEALRDHFGHLVTP IQFPAEEGFGHHILIDVLLMKQIEFSPDKPGSMVISEIHDLYRKKAEVLHQQLVEAVAETDEELMNHFFEEGTLTEDELR AGIKSALVTRTFFPVFCTSPLHLIGSERLLNAIVNLCPSPIERGPEHAFCSVMNDEKLLPPDPDGSTIAFIFKTMSEPRV GEISYIRVYSGHIESGHELIDVQTGQLEKLGQVYTMLGQKKIPVDKLLAGDIGMVVKLKNSHTNDTLADKGVNCRISPII FPEPVLSSAIVPVTQGDEEKISAGLHHLHEEDPSFAIEHDVEFNQTILKTLGETHLDIIISRLRNKFNIQVEVAPVRIPY RETIRVSASAQGKFKKQSGGRGQYGDVWIRIEPLERGSGFEFASEVVGGVVPTRYIPAVEKGLRESIAEGSLAGYPVVDL KAVVYDGSHHPVDSSEYAFKIAASMAFKAAVEKAKPLILEPIYSLTVQTPDQFTGEIVGDISSKRGRILGMDTESRFQVI KALIPQASLSTFHHALTRLTQSRARYNYTFSHYEEAPAEIANQLIAEKTAKQ >Mature_692_residues MQAVPTDQLRNIVVTGHSGTGKTMLCESLALCMGVINRLGSIEDGTTLSDYASDETERKHSLNTSLIHGVWNEKKINIID TPGLLDFHGDVKSAMRVADTVLITVNAATGVEVGTDTVWEYTKEYYKPTMFVLTKLDADRADYNATIEALRDHFGHLVTP IQFPAEEGFGHHILIDVLLMKQIEFSPDKPGSMVISEIHDLYRKKAEVLHQQLVEAVAETDEELMNHFFEEGTLTEDELR AGIKSALVTRTFFPVFCTSPLHLIGSERLLNAIVNLCPSPIERGPEHAFCSVMNDEKLLPPDPDGSTIAFIFKTMSEPRV GEISYIRVYSGHIESGHELIDVQTGQLEKLGQVYTMLGQKKIPVDKLLAGDIGMVVKLKNSHTNDTLADKGVNCRISPII FPEPVLSSAIVPVTQGDEEKISAGLHHLHEEDPSFAIEHDVEFNQTILKTLGETHLDIIISRLRNKFNIQVEVAPVRIPY RETIRVSASAQGKFKKQSGGRGQYGDVWIRIEPLERGSGFEFASEVVGGVVPTRYIPAVEKGLRESIAEGSLAGYPVVDL KAVVYDGSHHPVDSSEYAFKIAASMAFKAAVEKAKPLILEPIYSLTVQTPDQFTGEIVGDISSKRGRILGMDTESRFQVI KALIPQASLSTFHHALTRLTQSRARYNYTFSHYEEAPAEIANQLIAEKTAKQ
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=684, Percent_Identity=30.4093567251462, Blast_Score=325, Evalue=1e-88, Organism=Homo sapiens, GI19923640, Length=731, Percent_Identity=24.8974008207934, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI25306287, Length=716, Percent_Identity=23.7430167597765, Blast_Score=193, Evalue=5e-49, Organism=Homo sapiens, GI25306283, Length=399, Percent_Identity=26.8170426065163, Blast_Score=142, Evalue=1e-33, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=36.2215909090909, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1790835, Length=491, Percent_Identity=23.6252545824847, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI48994988, Length=151, Percent_Identity=29.8013245033113, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17533571, Length=697, Percent_Identity=27.5466284074605, Blast_Score=287, Evalue=1e-77, Organism=Caenorhabditis elegans, GI17556745, Length=712, Percent_Identity=23.5955056179775, Blast_Score=169, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323098, Length=700, Percent_Identity=29.2857142857143, Blast_Score=310, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6322359, Length=781, Percent_Identity=26.1203585147247, Blast_Score=249, Evalue=8e-67, Organism=Drosophila melanogaster, GI24582462, Length=705, Percent_Identity=28.3687943262411, Blast_Score=313, Evalue=2e-85, Organism=Drosophila melanogaster, GI221458488, Length=704, Percent_Identity=24.5738636363636, Blast_Score=195, Evalue=8e-50,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76539; Mature: 76539
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAVPTDQLRNIVVTGHSGTGKTMLCESLALCMGVINRLGSIEDGTTLSDYASDETERKH CCCCCCHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH SLNTSLIHGVWNEKKINIIDTPGLLDFHGDVKSAMRVADTVLITVNAATGVEVGTDTVWE HCCHHHHHCCCCCCEEEEEECCCCEECCCHHHHHHHHHCEEEEEEECCCCCCCCCHHHHH YTKEYYKPTMFVLTKLDADRADYNATIEALRDHFGHLVTPIQFPAEEGFGHHILIDVLLM HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH KQIEFSPDKPGSMVISEIHDLYRKKAEVLHQQLVEAVAETDEELMNHFFEEGTLTEDELR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AGIKSALVTRTFFPVFCTSPLHLIGSERLLNAIVNLCPSPIERGPEHAFCSVMNDEKLLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHEECCCCCCCC PDPDGSTIAFIFKTMSEPRVGEISYIRVYSGHIESGHELIDVQTGQLEKLGQVYTMLGQK CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCC KIPVDKLLAGDIGMVVKLKNSHTNDTLADKGVNCRISPIIFPEPVLSSAIVPVTQGDEEK CCCHHHHHCCCCEEEEEEECCCCCCHHHCCCCCEEECCEECCCHHHHCCEEECCCCCHHH ISAGLHHLHEEDPSFAIEHDVEFNQTILKTLGETHLDIIISRLRNKFNIQVEVAPVRIPY HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEEEEEECCH RETIRVSASAQGKFKKQSGGRGQYGDVWIRIEPLERGSGFEFASEVVGGVVPTRYIPAVE HHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHH KGLRESIAEGSLAGYPVVDLKAVVYDGSHHPVDSSEYAFKIAASMAFKAAVEKAKPLILE HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE PIYSLTVQTPDQFTGEIVGDISSKRGRILGMDTESRFQVIKALIPQASLSTFHHALTRLT CHHHEEECCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHH QSRARYNYTFSHYEEAPAEIANQLIAEKTAKQ HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQAVPTDQLRNIVVTGHSGTGKTMLCESLALCMGVINRLGSIEDGTTLSDYASDETERKH CCCCCCHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH SLNTSLIHGVWNEKKINIIDTPGLLDFHGDVKSAMRVADTVLITVNAATGVEVGTDTVWE HCCHHHHHCCCCCCEEEEEECCCCEECCCHHHHHHHHHCEEEEEEECCCCCCCCCHHHHH YTKEYYKPTMFVLTKLDADRADYNATIEALRDHFGHLVTPIQFPAEEGFGHHILIDVLLM HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH KQIEFSPDKPGSMVISEIHDLYRKKAEVLHQQLVEAVAETDEELMNHFFEEGTLTEDELR HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AGIKSALVTRTFFPVFCTSPLHLIGSERLLNAIVNLCPSPIERGPEHAFCSVMNDEKLLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHEECCCCCCCC PDPDGSTIAFIFKTMSEPRVGEISYIRVYSGHIESGHELIDVQTGQLEKLGQVYTMLGQK CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCC KIPVDKLLAGDIGMVVKLKNSHTNDTLADKGVNCRISPIIFPEPVLSSAIVPVTQGDEEK CCCHHHHHCCCCEEEEEEECCCCCCHHHCCCCCEEECCEECCCHHHHCCEEECCCCCHHH ISAGLHHLHEEDPSFAIEHDVEFNQTILKTLGETHLDIIISRLRNKFNIQVEVAPVRIPY HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEEEEEECCH RETIRVSASAQGKFKKQSGGRGQYGDVWIRIEPLERGSGFEFASEVVGGVVPTRYIPAVE HHHEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHH KGLRESIAEGSLAGYPVVDLKAVVYDGSHHPVDSSEYAFKIAASMAFKAAVEKAKPLILE HHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE PIYSLTVQTPDQFTGEIVGDISSKRGRILGMDTESRFQVIKALIPQASLSTFHHALTRLT CHHHEEECCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHH QSRARYNYTFSHYEEAPAEIANQLIAEKTAKQ HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]