| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is pyrG [H]
Identifier: 21672983
GI number: 21672983
Start: 137194
End: 138891
Strand: Direct
Name: pyrG [H]
Synonym: CT0142
Alternate gene names: 21672983
Gene position: 137194-138891 (Clockwise)
Preceding gene: 21672982
Following gene: 21672986
Centisome position: 6.37
GC content: 54.36
Gene sequence:
>1698_bases ATGGCGCGCCCGAAGAATGTAAAGCATATTTTTGTAACCGGCGGGGTGATCTCCTCTCTTGGAAAGGGCATCCTTTCTGC TTCGCTTGGCCTTTTGCTCAAGTCCCGCGGATTGCGCGTGGCGATCCAGAAATACGATCCCTACATCAACGTCGATCCCG GTACGATGTCGCCCTACCAGCATGGCGAGGTTTACGTGACCGACGACGGCGCTGAGACTGATCTCGATCTTGGCCACTAC GAGCGCTTCCTCGACGAACCGACCTCGCAGGCCTGCAACCTGACGATGGGCCGCGTCTACAAGTCGGTCATCGACAAGGA GCGGCGCGGCGAATATCTCGGCGGTACGGTGCAGGTCGTGCCCCACGTGATCGACGAGATCAAGGAGAAGATGGGCGATC TGGCCAAAAATGGTAGCATCGATGTGCTGATCACCGAAATTGGCGGTACCATCGGCGATATCGAGTCGCTTCCCTTCCTC GAAGCGATGCGCCAGCTCAAGCTCGAACTTGGCGAGCACAATCTGCTCAACATCCACCTTACCTTCGTGCCGTACATCAA GGCGGCTAGCGAGCTGAAGACCAAGCCGACGCAGCACAGTGTCAAGATGCTGCTCGAAACCGGTATTCAGCCCGACATTC TGGTCTGCCGGAGCGAGAAGCCGCTGTCGAGGGAGATCAAGAACAAGGTTGGTCACTTCTGCAACGTTCATGACCTGGAC GTTATCGGCCTCAACGACTGTGATACGATCTACGAAGTGCCGCTCATGCTGCTCAAGGAGCAGCTCGATCTGCGCGTCAT GAAAAAGCTGGGGTTGAAGAAGTTCCGCGAACCCAATCTGGAGTACTGGAAGAACTTCTGCGAAAAGGTGAAGCATCCGA AGGATGGCGAGATCACCATTGGCATATGCGGCAAGTACACTGAGTATCCCGACGCCTACAAATCGATTATCGAATCGTTC ATTCATGCCGGCGCTAGCAATGACGTCAGGGTGTTGGTCAAGATGCTCAGGGCTGAAGATGCCGAAGATCCGAAGTTCGA TATTTCGAGCGCCTTCAAGGGGATCAGTGGCCTGCTTGTCGCGCCTGGTTTTGGCGACCGTGGCATCGAGGGCAAAGTGC GTTTCGTTCAGTATGCACGAGAGAACAACATTCCGTTCTTTGGTATCTGCCTCGGCATGCAGTGCGCCACCATCGAATTC GCCCGCAACATCTGTGACCTGCCCGACGCCAACTCGACCGAGTTCAACAAGCGAACACGTTTTCCGGTCATCGACCTCAT GGAGCACCAGAAAAAGGTCAAGGAGAAAGGGGGAACGATGCGTCTCGGCAGCTATCCTTGTATTCTGAAGGAGGGTTCGA AAGCTCATGAGCTCTATGGCAAATTCCTTATCAATGAGCGTCATCGCCACCGGTACGAATTCAACAACCAGTTCCGCAAG CTTTTCGAAGAGAAAGGAATGATTTTTTCAGGCACCTCGCCGAACGGTGATCTGGTAGAGATCGTTGAACTGAAGAATCA TCGCTGGTTCGTAGCTGTGCAGTTCCATCCCGAGCTGAAATCGCGAGTGCAGAAAGTGCATCCGCTTTTTGACGGCTTCG TTCATGCTGCCAAGGAGTTTGCACAAGGCAAGCGCCAGCTCTCTCTTGAGGTCGAAATGCCGAGGCTCAGTTCTACGGAG ATGGAGAACGCAGGCTGA
Upstream 100 bases:
>100_bases TTGTGATCCAAACCGGCTGACGAAAGAGGTATTGATCGGAGAGCCGGGCGTTCTCCGGAAATGAATTCGACTGTTATCAC TTAATTATTGTTAGAAAGGT
Downstream 100 bases:
>100_bases GTATCTCGCCGTCGCTGATTTTTCTATTATGAGTGGATATTGCTGGTGGAAAAAACCGCGGGCAATGTCCATTTTCTTTT TTGTGGCAGCCGGATGCAGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MARPKNVKHIFVTGGVISSLGKGILSASLGLLLKSRGLRVAIQKYDPYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHY ERFLDEPTSQACNLTMGRVYKSVIDKERRGEYLGGTVQVVPHVIDEIKEKMGDLAKNGSIDVLITEIGGTIGDIESLPFL EAMRQLKLELGEHNLLNIHLTFVPYIKAASELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVHDLD VIGLNDCDTIYEVPLMLLKEQLDLRVMKKLGLKKFREPNLEYWKNFCEKVKHPKDGEITIGICGKYTEYPDAYKSIIESF IHAGASNDVRVLVKMLRAEDAEDPKFDISSAFKGISGLLVAPGFGDRGIEGKVRFVQYARENNIPFFGICLGMQCATIEF ARNICDLPDANSTEFNKRTRFPVIDLMEHQKKVKEKGGTMRLGSYPCILKEGSKAHELYGKFLINERHRHRYEFNNQFRK LFEEKGMIFSGTSPNGDLVEIVELKNHRWFVAVQFHPELKSRVQKVHPLFDGFVHAAKEFAQGKRQLSLEVEMPRLSSTE MENAG
Sequences:
>Translated_565_residues MARPKNVKHIFVTGGVISSLGKGILSASLGLLLKSRGLRVAIQKYDPYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHY ERFLDEPTSQACNLTMGRVYKSVIDKERRGEYLGGTVQVVPHVIDEIKEKMGDLAKNGSIDVLITEIGGTIGDIESLPFL EAMRQLKLELGEHNLLNIHLTFVPYIKAASELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVHDLD VIGLNDCDTIYEVPLMLLKEQLDLRVMKKLGLKKFREPNLEYWKNFCEKVKHPKDGEITIGICGKYTEYPDAYKSIIESF IHAGASNDVRVLVKMLRAEDAEDPKFDISSAFKGISGLLVAPGFGDRGIEGKVRFVQYARENNIPFFGICLGMQCATIEF ARNICDLPDANSTEFNKRTRFPVIDLMEHQKKVKEKGGTMRLGSYPCILKEGSKAHELYGKFLINERHRHRYEFNNQFRK LFEEKGMIFSGTSPNGDLVEIVELKNHRWFVAVQFHPELKSRVQKVHPLFDGFVHAAKEFAQGKRQLSLEVEMPRLSSTE MENAG >Mature_564_residues ARPKNVKHIFVTGGVISSLGKGILSASLGLLLKSRGLRVAIQKYDPYINVDPGTMSPYQHGEVYVTDDGAETDLDLGHYE RFLDEPTSQACNLTMGRVYKSVIDKERRGEYLGGTVQVVPHVIDEIKEKMGDLAKNGSIDVLITEIGGTIGDIESLPFLE AMRQLKLELGEHNLLNIHLTFVPYIKAASELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVHDLDV IGLNDCDTIYEVPLMLLKEQLDLRVMKKLGLKKFREPNLEYWKNFCEKVKHPKDGEITIGICGKYTEYPDAYKSIIESFI HAGASNDVRVLVKMLRAEDAEDPKFDISSAFKGISGLLVAPGFGDRGIEGKVRFVQYARENNIPFFGICLGMQCATIEFA RNICDLPDANSTEFNKRTRFPVIDLMEHQKKVKEKGGTMRLGSYPCILKEGSKAHELYGKFLINERHRHRYEFNNQFRKL FEEKGMIFSGTSPNGDLVEIVELKNHRWFVAVQFHPELKSRVQKVHPLFDGFVHAAKEFAQGKRQLSLEVEMPRLSSTEM ENAG
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=550, Percent_Identity=43.2727272727273, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI28559085, Length=551, Percent_Identity=44.2831215970962, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI28559083, Length=551, Percent_Identity=44.2831215970962, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI221316689, Length=551, Percent_Identity=44.2831215970962, Blast_Score=438, Evalue=1e-123, Organism=Escherichia coli, GI1789142, Length=551, Percent_Identity=51.3611615245009, Blast_Score=540, Evalue=1e-155, Organism=Caenorhabditis elegans, GI25148299, Length=626, Percent_Identity=36.741214057508, Blast_Score=391, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6322563, Length=563, Percent_Identity=41.3854351687389, Blast_Score=412, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6319432, Length=573, Percent_Identity=39.9650959860384, Blast_Score=404, Evalue=1e-113, Organism=Drosophila melanogaster, GI24664469, Length=551, Percent_Identity=45.3720508166969, Blast_Score=453, Evalue=1e-127, Organism=Drosophila melanogaster, GI21357815, Length=495, Percent_Identity=43.4343434343434, Blast_Score=380, Evalue=1e-105,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 63832; Mature: 63700
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKNVKHIFVTGGVISSLGKGILSASLGLLLKSRGLRVAIQKYDPYINVDPGTMSPYQ CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCC HGEVYVTDDGAETDLDLGHYERFLDEPTSQACNLTMGRVYKSVIDKERRGEYLGGTVQVV CCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH PHVIDEIKEKMGDLAKNGSIDVLITEIGGTIGDIESLPFLEAMRQLKLELGEHNLLNIHL HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE TFVPYIKAASELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVHDLD EEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEE VIGLNDCDTIYEVPLMLLKEQLDLRVMKKLGLKKFREPNLEYWKNFCEKVKHPKDGEITI EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCCCCCEEE GICGKYTEYPDAYKSIIESFIHAGASNDVRVLVKMLRAEDAEDPKFDISSAFKGISGLLV EECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEE APGFGDRGIEGKVRFVQYARENNIPFFGICLGMQCATIEFARNICDLPDANSTEFNKRTR ECCCCCCCCCCCCHHEEEHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC FPVIDLMEHQKKVKEKGGTMRLGSYPCILKEGSKAHELYGKFLINERHRHRYEFNNQFRK CCHHHHHHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH LFEEKGMIFSGTSPNGDLVEIVELKNHRWFVAVQFHPELKSRVQKVHPLFDGFVHAAKEF HHHHCCCEEECCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AQGKRQLSLEVEMPRLSSTEMENAG HCCHHEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure ARPKNVKHIFVTGGVISSLGKGILSASLGLLLKSRGLRVAIQKYDPYINVDPGTMSPYQ CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCC HGEVYVTDDGAETDLDLGHYERFLDEPTSQACNLTMGRVYKSVIDKERRGEYLGGTVQVV CCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH PHVIDEIKEKMGDLAKNGSIDVLITEIGGTIGDIESLPFLEAMRQLKLELGEHNLLNIHL HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE TFVPYIKAASELKTKPTQHSVKMLLETGIQPDILVCRSEKPLSREIKNKVGHFCNVHDLD EEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEE VIGLNDCDTIYEVPLMLLKEQLDLRVMKKLGLKKFREPNLEYWKNFCEKVKHPKDGEITI EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHCCCCCCCEEE GICGKYTEYPDAYKSIIESFIHAGASNDVRVLVKMLRAEDAEDPKFDISSAFKGISGLLV EECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEE APGFGDRGIEGKVRFVQYARENNIPFFGICLGMQCATIEFARNICDLPDANSTEFNKRTR ECCCCCCCCCCCCHHEEEHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCC FPVIDLMEHQKKVKEKGGTMRLGSYPCILKEGSKAHELYGKFLINERHRHRYEFNNQFRK CCHHHHHHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHH LFEEKGMIFSGTSPNGDLVEIVELKNHRWFVAVQFHPELKSRVQKVHPLFDGFVHAAKEF HHHHCCCEEECCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AQGKRQLSLEVEMPRLSSTEMENAG HCCHHEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA