| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672956
Identifier: 21672956
GI number: 21672956
Start: 110367
End: 110546
Strand: Reverse
Name: 21672956
Synonym: CT0115
Alternate gene names: NA
Gene position: 110546-110367 (Counterclockwise)
Preceding gene: 21672957
Following gene: 21672955
Centisome position: 5.13
GC content: 43.89
Gene sequence:
>180_bases ATGGGTTTCGCAAAATCCACAGGCGATGATGTCAACAACGCCTCTCTGCGTTTGAAACGTCTCAGAAAAGCACGTCCGCC TCACTATCTTTCCGACCATAACGGCTATTCACAGCTCTTCTGTAAGCGGAGAGCAGTCTTATCGTTTTTTATGATTCCTT TGGAATCAAAATTTTTCTGA
Upstream 100 bases:
>100_bases AGGAATCGCCATTCCCGAAATTCACAACACTCGCAGGGCGAACAAAAGAGGATCGCCCTGACCATTCTCATGGAGTCAAA CCGAACGAGCCTTCATCGTC
Downstream 100 bases:
>100_bases TTTTTGTCAATTGACCAGGTTAGAATCCACAGATGAATCGTAGCCGCTTACTTCTTCTTGGTGCCGAGGCTGTCGCGCAG GGCGCGATCGATGCCGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MGFAKSTGDDVNNASLRLKRLRKARPPHYLSDHNGYSQLFCKRRAVLSFFMIPLESKFF
Sequences:
>Translated_59_residues MGFAKSTGDDVNNASLRLKRLRKARPPHYLSDHNGYSQLFCKRRAVLSFFMIPLESKFF >Mature_58_residues GFAKSTGDDVNNASLRLKRLRKARPPHYLSDHNGYSQLFCKRRAVLSFFMIPLESKFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6864; Mature: 6733
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFAKSTGDDVNNASLRLKRLRKARPPHYLSDHNGYSQLFCKRRAVLSFFMIPLESKFF CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GFAKSTGDDVNNASLRLKRLRKARPPHYLSDHNGYSQLFCKRRAVLSFFMIPLESKFF CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA