Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21672950

Identifier: 21672950

GI number: 21672950

Start: 104234

End: 105055

Strand: Direct

Name: 21672950

Synonym: CT0109

Alternate gene names: NA

Gene position: 104234-105055 (Clockwise)

Preceding gene: 21672949

Following gene: 21672958

Centisome position: 4.84

GC content: 56.93

Gene sequence:

>822_bases
ATGAAAACCATCACCCGTCGATTGTTTGCTGCCGTGCTTGTGCCGGGTCTGTTGTTGCTCTCGGCATGCGGCAAGAAAGA
TTCCAGTGCTCCCGATTCTGCCGGTGTCGAGCATGCGGCTCCCGCCATAGCCGGTCCCTTTACCGGTGTACTTACCATGA
AGACTACCATACCCAAGGCCGGAACGAGCGATATGAAGCTTTACATCGGCCCGAAAGGGATGCGTGCCGAAAGCAAGACC
AACATCGGTGCTCACGGCGGAGAGGTGTCCATGACCATCCTTTCGCTGAAGGACAGCCCCGACAAGATTTACATGATCAA
TGGCGCGACCGGCGCCTGCATGGAACTTGATGTGTCGAAGGTGAAAAAGCAGCCGGGCGGCGACCCGTACAAGAATGCCA
AGATCGAAAATCTGGGCAGGGAGCGCGTCAATGGTTACGACTGCAACCATGTCAGGATTTCGTGGCCTGACAAACAGAAC
ACCGTCGATCTCTGGGTGAGCAAGGATATTCTCGACTATTTCGCTTATGCCAAGATGCAGGGTTCGGATGACCAGACCGA
TACCCAGCTTGCCGAAAAGCTGAGGGCTGCCGGCCTCGACGGCTTCCCTGTCAAGACGCTGCTTTCTCCGGAAGGCGTGG
TCACCGAGCTGGTCAAAGCTGAGCGCACCACTCCGGACGACAAGCTCTTCGAGGTGCCAGCCAACTGCACGAAGATGGAG
ATTCCCGCCATTCCGGCCTCCCCGCAGGGCATGAGCAAGGAGGACGTGAAAAAGATGCAGGACTGGGCGCGCAAGATGCA
GCAGCAGATGCCGAAGCAGTAA

Upstream 100 bases:

>100_bases
AGCAAGGATTTGCTTACATTGACCCATATGCTTCTTTTTTTCAGTCTTATCGTTGCTTCCGGTTCTTTTGAAACAACGCC
ACCCCTAAATCAAAAAGATC

Downstream 100 bases:

>100_bases
TCAGAACAACGATGACATAATTGCCACGAAACCCCCGCAACGTCGGGGGTTTCGCATTTTTTGGCCGTTCGCAATCCTGG
CGAGTGTGCCGAGGCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKTITRRLFAAVLVPGLLLLSACGKKDSSAPDSAGVEHAAPAIAGPFTGVLTMKTTIPKAGTSDMKLYIGPKGMRAESKT
NIGAHGGEVSMTILSLKDSPDKIYMINGATGACMELDVSKVKKQPGGDPYKNAKIENLGRERVNGYDCNHVRISWPDKQN
TVDLWVSKDILDYFAYAKMQGSDDQTDTQLAEKLRAAGLDGFPVKTLLSPEGVVTELVKAERTTPDDKLFEVPANCTKME
IPAIPASPQGMSKEDVKKMQDWARKMQQQMPKQ

Sequences:

>Translated_273_residues
MKTITRRLFAAVLVPGLLLLSACGKKDSSAPDSAGVEHAAPAIAGPFTGVLTMKTTIPKAGTSDMKLYIGPKGMRAESKT
NIGAHGGEVSMTILSLKDSPDKIYMINGATGACMELDVSKVKKQPGGDPYKNAKIENLGRERVNGYDCNHVRISWPDKQN
TVDLWVSKDILDYFAYAKMQGSDDQTDTQLAEKLRAAGLDGFPVKTLLSPEGVVTELVKAERTTPDDKLFEVPANCTKME
IPAIPASPQGMSKEDVKKMQDWARKMQQQMPKQ
>Mature_273_residues
MKTITRRLFAAVLVPGLLLLSACGKKDSSAPDSAGVEHAAPAIAGPFTGVLTMKTTIPKAGTSDMKLYIGPKGMRAESKT
NIGAHGGEVSMTILSLKDSPDKIYMINGATGACMELDVSKVKKQPGGDPYKNAKIENLGRERVNGYDCNHVRISWPDKQN
TVDLWVSKDILDYFAYAKMQGSDDQTDTQLAEKLRAAGLDGFPVKTLLSPEGVVTELVKAERTTPDDKLFEVPANCTKME
IPAIPASPQGMSKEDVKKMQDWARKMQQQMPKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29645; Mature: 29645

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTITRRLFAAVLVPGLLLLSACGKKDSSAPDSAGVEHAAPAIAGPFTGVLTMKTTIPKA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCC
GTSDMKLYIGPKGMRAESKTNIGAHGGEVSMTILSLKDSPDKIYMINGATGACMELDVSK
CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEECCHHH
VKKQPGGDPYKNAKIENLGRERVNGYDCNHVRISWPDKQNTVDLWVSKDILDYFAYAKMQ
HHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHCC
GSDDQTDTQLAEKLRAAGLDGFPVKTLLSPEGVVTELVKAERTTPDDKLFEVPANCTKME
CCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEE
IPAIPASPQGMSKEDVKKMQDWARKMQQQMPKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTITRRLFAAVLVPGLLLLSACGKKDSSAPDSAGVEHAAPAIAGPFTGVLTMKTTIPKA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEECCCC
GTSDMKLYIGPKGMRAESKTNIGAHGGEVSMTILSLKDSPDKIYMINGATGACMELDVSK
CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEECCHHH
VKKQPGGDPYKNAKIENLGRERVNGYDCNHVRISWPDKQNTVDLWVSKDILDYFAYAKMQ
HHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHCC
GSDDQTDTQLAEKLRAAGLDGFPVKTLLSPEGVVTELVKAERTTPDDKLFEVPANCTKME
CCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEE
IPAIPASPQGMSKEDVKKMQDWARKMQQQMPKQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA