Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

Click here to switch to the map view.

The map label for this gene is 21672958

Identifier: 21672958

GI number: 21672958

Start: 112431

End: 113888

Strand: Direct

Name: 21672958

Synonym: CT0117

Alternate gene names: NA

Gene position: 112431-113888 (Clockwise)

Preceding gene: 21672950

Following gene: 21672959

Centisome position: 5.22

GC content: 57.61

Gene sequence:

>1458_bases
ATGGCAAAGGTTGTTGTTTTGGGAGCTGGCGTTTCGGGGCATACCTGCGCATCCTTTCTCAAGAAAAAACTTGGAAAGCA
GCATGAGGTTGTGGTTATCTCGCCCAACAGCTATTACCAGTGGATTCCGTCGAATATATGGGTCGGCGTGGGCCATATGA
CCATCGACGATGTGCGCTTCAAGCTCAAGAAGGTTTATGACCGCTGGGGCATCGATTACAAGCAGGCGAAAGCCGTTTCG
ATTCATCCCGAGGGCGACGCCAACATCAGCAAGGGATACGTCACCATCGAGTACACCGACGAGGAGCACGCCGGGTACAC
CGAGACGGTCGATTACGACTACCTTGTCAACGCCACCGGTCCAAAGCTGAACTTCGAGGCTACCGAGGGGCTTGGGCCTG
ACAAAAACTCGCTGTCTGTCTGCACCTACAGCCACGCGGCTCATGCGTGGGAGGAGTTGCAAAAAAGCATCGAAAAGATG
AAGAATGGTCAGAAGCAGCGTTTCCTCATTGGCACCGGCCATGCGATGGCTACCTGTCAGGGCGCAGCTTTCGAGTATAT
CCTGAACGTCGCTCACGAAATCTCCCGTCGCGGCCTGAGCCACATGGCGGAGCTGACCTGGATTTCAAACGAGTACGAGC
TGGGTGATTTCGGTATGGGCGGCGCGTTCATCAAGCGCGGCGGTTACATTACGCCGACCAAGGTCTTTACCGAATCGCTG
CTCGCTGAGTACGGCATCAAGTGGATCCGCCGGGCGGGTGTCTACAAGGTGGAGCCGGGCGTGGCCCACTACGAAACGCT
CGACGGCGAAATGCTTTCGCAGGAGTTCGACTTTGCGATGCTTATTCCGTCGTTCTCCGGCGTTGGCCTGACCGCCTTCG
ACAAAAGCGGCAACGACATCACCGACAAGATGTTTCTGCCGAACAAGTTCATGAAGGTCGATGCGGACTACACCGCCAAG
CCGTTCGGCGAGTGGGGCGCTAACGACTGGCCGACCATCTACCAGACGCCGATGTACAGCAATATCTACGCCGCGGGCAT
CGCCTTCGCGCCGCCGCATTCGATCTCGAAGCCCATGACGAGCGTGAATGGCCGCCAGATTTTCCCGACGCCGCCGCGCA
CCGGCATGCCGTCGGGCGTTATCGGCAAGATCATTGCGCTCAATATCTCCGAGCAGATCAAGGGCAACCACAAGGAGCAC
CATCACAAAGCCTCGATGGCCCGCATGGGCGCAGCCTGCATTGTGTCGGCCGGCTTCGGTTCGTTTGACGGACTCGGCGC
GTCGATGACCGTGTTCCCCATCGTGCCCGATTGGGAGAAGTATCCGGAGTGGGGCCGCGACATGACCTACTCGGTCGGCG
AAGTGGGGCTTGCCGGTCACTGGCTGAAGTTCATGCTGCACTACCTCTTCTTCCACAAGGCGAAAGGCTATCCGTTCTGG
TACCTGATTCCGGAATAA

Upstream 100 bases:

>100_bases
CTGGCTGAGGTGTAGCCGTCGTTCTTTTTTCGGCCCGGGCAGGAGTGTTTGAGGTGTCTATTTGTTTTTAAATGGTTTAA
CAATGAAAATCTGACTCGTT

Downstream 100 bases:

>100_bases
GATGGGGCAACATTCAAGAGATATCGATTTCAATCTAAAACTCGTGAATCATGGGTAACTATAAATTCAAGGCATACTAC
GACGAAGCCTATCCTCCGGT

Product: sulfide-quinone reductase, putative

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Sulfide-Quinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MAKVVVLGAGVSGHTCASFLKKKLGKQHEVVVISPNSYYQWIPSNIWVGVGHMTIDDVRFKLKKVYDRWGIDYKQAKAVS
IHPEGDANISKGYVTIEYTDEEHAGYTETVDYDYLVNATGPKLNFEATEGLGPDKNSLSVCTYSHAAHAWEELQKSIEKM
KNGQKQRFLIGTGHAMATCQGAAFEYILNVAHEISRRGLSHMAELTWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL
LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFAMLIPSFSGVGLTAFDKSGNDITDKMFLPNKFMKVDADYTAK
PFGEWGANDWPTIYQTPMYSNIYAAGIAFAPPHSISKPMTSVNGRQIFPTPPRTGMPSGVIGKIIALNISEQIKGNHKEH
HHKASMARMGAACIVSAGFGSFDGLGASMTVFPIVPDWEKYPEWGRDMTYSVGEVGLAGHWLKFMLHYLFFHKAKGYPFW
YLIPE

Sequences:

>Translated_485_residues
MAKVVVLGAGVSGHTCASFLKKKLGKQHEVVVISPNSYYQWIPSNIWVGVGHMTIDDVRFKLKKVYDRWGIDYKQAKAVS
IHPEGDANISKGYVTIEYTDEEHAGYTETVDYDYLVNATGPKLNFEATEGLGPDKNSLSVCTYSHAAHAWEELQKSIEKM
KNGQKQRFLIGTGHAMATCQGAAFEYILNVAHEISRRGLSHMAELTWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL
LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFAMLIPSFSGVGLTAFDKSGNDITDKMFLPNKFMKVDADYTAK
PFGEWGANDWPTIYQTPMYSNIYAAGIAFAPPHSISKPMTSVNGRQIFPTPPRTGMPSGVIGKIIALNISEQIKGNHKEH
HHKASMARMGAACIVSAGFGSFDGLGASMTVFPIVPDWEKYPEWGRDMTYSVGEVGLAGHWLKFMLHYLFFHKAKGYPFW
YLIPE
>Mature_484_residues
AKVVVLGAGVSGHTCASFLKKKLGKQHEVVVISPNSYYQWIPSNIWVGVGHMTIDDVRFKLKKVYDRWGIDYKQAKAVSI
HPEGDANISKGYVTIEYTDEEHAGYTETVDYDYLVNATGPKLNFEATEGLGPDKNSLSVCTYSHAAHAWEELQKSIEKMK
NGQKQRFLIGTGHAMATCQGAAFEYILNVAHEISRRGLSHMAELTWISNEYELGDFGMGGAFIKRGGYITPTKVFTESLL
AEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFAMLIPSFSGVGLTAFDKSGNDITDKMFLPNKFMKVDADYTAKP
FGEWGANDWPTIYQTPMYSNIYAAGIAFAPPHSISKPMTSVNGRQIFPTPPRTGMPSGVIGKIIALNISEQIKGNHKEHH
HKASMARMGAACIVSAGFGSFDGLGASMTVFPIVPDWEKYPEWGRDMTYSVGEVGLAGHWLKFMLHYLFFHKAKGYPFWY
LIPE

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53975; Mature: 53844

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVVVLGAGVSGHTCASFLKKKLGKQHEVVVISPNSYYQWIPSNIWVGVGHMTIDDVRF
CCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCEEEEECCEEHHHHHH
KLKKVYDRWGIDYKQAKAVSIHPEGDANISKGYVTIEYTDEEHAGYTETVDYDYLVNATG
HHHHHHHHHCCCHHHCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEECCCEEEEECCC
PKLNFEATEGLGPDKNSLSVCTYSHAAHAWEELQKSIEKMKNGQKQRFLIGTGHAMATCQ
CEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEEEC
GAAFEYILNVAHEISRRGLSHMAELTWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHH
LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFAMLIPSFSGVGLTAFDKSGNDI
HHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHHCCCEEEEECCCCCCEEEEECCCCCCC
TDKMFLPNKFMKVDADYTAKPFGEWGANDWPTIYQTPMYSNIYAAGIAFAPPHSISKPMT
CCEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCEEECCCCCCCCCHH
SVNGRQIFPTPPRTGMPSGVIGKIIALNISEQIKGNHKEHHHKASMARMGAACIVSAGFG
CCCCCEECCCCCCCCCCCCHHCEEEEEECHHHHCCCCHHHHHHHHHHHHCCEEEEECCCC
SFDGLGASMTVFPIVPDWEKYPEWGRDMTYSVGEVGLAGHWLKFMLHYLFFHKAKGYPFW
CCCCCCCCEEEEEECCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
YLIPE
EEECC
>Mature Secondary Structure 
AKVVVLGAGVSGHTCASFLKKKLGKQHEVVVISPNSYYQWIPSNIWVGVGHMTIDDVRF
CEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCEEEEECCEEHHHHHH
KLKKVYDRWGIDYKQAKAVSIHPEGDANISKGYVTIEYTDEEHAGYTETVDYDYLVNATG
HHHHHHHHHCCCHHHCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEECCCEEEEECCC
PKLNFEATEGLGPDKNSLSVCTYSHAAHAWEELQKSIEKMKNGQKQRFLIGTGHAMATCQ
CEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHEEEC
GAAFEYILNVAHEISRRGLSHMAELTWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHH
LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFAMLIPSFSGVGLTAFDKSGNDI
HHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHHCCCEEEEECCCCCCEEEEECCCCCCC
TDKMFLPNKFMKVDADYTAKPFGEWGANDWPTIYQTPMYSNIYAAGIAFAPPHSISKPMT
CCEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCCEEECCCCCCCCCHH
SVNGRQIFPTPPRTGMPSGVIGKIIALNISEQIKGNHKEHHHKASMARMGAACIVSAGFG
CCCCCEECCCCCCCCCCCCHHCEEEEEECHHHHCCCCHHHHHHHHHHHHCCEEEEECCCC
SFDGLGASMTVFPIVPDWEKYPEWGRDMTYSVGEVGLAGHWLKFMLHYLFFHKAKGYPFW
CCCCCCCCEEEEEECCCHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
YLIPE
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA