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The map label for this gene is ygcA [C]

Identifier: 21672941

GI number: 21672941

Start: 93942

End: 95141

Strand: Reverse

Name: ygcA [C]

Synonym: CT0100

Alternate gene names: 21672941

Gene position: 95141-93942 (Counterclockwise)

Preceding gene: 21672945

Following gene: 21672937

Centisome position: 4.42

GC content: 61.75

Gene sequence:

>1200_bases
ATGACCCTCGACGAACTCAACAGGCTGCTCGATCCGCAGGTGCTTGCGTTGATCGACGCCCACGCCAGTGACGATCCGGC
GACGTTTGCGATGCAATTTCACGGAAGGGGCGATTTGCCGGTGCGGGCGATAGCCGAGCAGATTGCCTGCCGGAAAAAGG
CTGCCGCGAAGCTGCCATCGCTGTCGCGCTTTCCGATGCTCTATACGCGGCTCGGCCTCGAACAGGCTTCCGGCGAGCGG
GCTGCGGAGTGGAAAGCGTCGCTTATGCGGGGGTGGCGGGCGATTGATCTGACGGGAGGTCTCGGAATCGATACGCTCTT
TCTCGCCCAGCGCTTCGACTCGGTGGTATCGTGCGAGCGGAACGAGGCGCTGGCACGGCTAGCCGAAGCGAACCGGCGCA
TGATGGGGGTGACGAATGTCGAGACGCTCATTGGCGACAGTGAGGAACTGTTGGCAGGGTATGCCGACGATTCGTTCGAC
TGGGTACTGGTCGATCCGGCGCGGCGCGAGCACGGCGGGCGCTCGGCGGGGCTATCGGCGTCGAGTCCCGATGTGGTACG
CTTGCACGACATGCTGCTCCGCAAGGCACGACGAGTCTGCATCAAGGCGTCACCCGCGCTGGAAATCAGCGGTCTGGAAA
CACAACTGCCGACGCTCTCGGAAGTTATCGCCGTGTCGGTGGATGGGGAGTGCAAGGAGGTGCTACTGCTGCTCTACCGC
GAACGCGAAGCTGGCTTGACGCCGGAGATTCGTGCGGTGTGCCTCGGAAGCGAGACGTTCGAGATCGTTTCATCTGGTGG
CGTGCCGCCCGCTCGCGTGGTCGCCGAAGCGCCCGGCACGTGGCTCTACGAGCCGGACACGGCGATCATCAAGGCGCGGC
TGACGGGCGAGCTTGCGCGTCAATTCCATCTTGAATTTCTCAATCGCACGGTGGATTATCTGACGTCAGATCGGTTGATC
GAGCCATTTCCGGGCAGAAGCTTCCGGATCGAGGAGTGCCGTCCATTCAGGCAGAAGAGTTTCCGGAAGGAGCTTGCTGA
ACTGGAAATCACGAATGCGGCCATCCAGCGGCGCGATTTTCCGCTGTCGGTCGAGGAGCTGCGCAAGCGGTACAAAATCG
GGGAGAGCAGCGAGCGCTATCTCTTTTTCACGAAAAACGCTACGGGCAGTCTCATCTGGCTCTCGTGCAGAAAGCCGTGA

Upstream 100 bases:

>100_bases
AACGGCTGCTGAAACCGGGTGATATGAACAAAAAATGGATACTGAAGCAAGGGAATGTACCCGCGCAACGCGGCGCTCCC
CATGAAATCTTTTTTTCACT

Downstream 100 bases:

>100_bases
GCTTCAGGTCCGGTTGCGAAGCATCAGAAGCTTCTGAAGCTCCTGCTGCGCCACGCCGTAGCGCAGGCCCTGGATGCTCA
CCGTCAGGCTGCCGACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTLDELNRLLDPQVLALIDAHASDDPATFAMQFHGRGDLPVRAIAEQIACRKKAAAKLPSLSRFPMLYTRLGLEQASGER
AAEWKASLMRGWRAIDLTGGLGIDTLFLAQRFDSVVSCERNEALARLAEANRRMMGVTNVETLIGDSEELLAGYADDSFD
WVLVDPARREHGGRSAGLSASSPDVVRLHDMLLRKARRVCIKASPALEISGLETQLPTLSEVIAVSVDGECKEVLLLLYR
EREAGLTPEIRAVCLGSETFEIVSSGGVPPARVVAEAPGTWLYEPDTAIIKARLTGELARQFHLEFLNRTVDYLTSDRLI
EPFPGRSFRIEECRPFRQKSFRKELAELEITNAAIQRRDFPLSVEELRKRYKIGESSERYLFFTKNATGSLIWLSCRKP

Sequences:

>Translated_399_residues
MTLDELNRLLDPQVLALIDAHASDDPATFAMQFHGRGDLPVRAIAEQIACRKKAAAKLPSLSRFPMLYTRLGLEQASGER
AAEWKASLMRGWRAIDLTGGLGIDTLFLAQRFDSVVSCERNEALARLAEANRRMMGVTNVETLIGDSEELLAGYADDSFD
WVLVDPARREHGGRSAGLSASSPDVVRLHDMLLRKARRVCIKASPALEISGLETQLPTLSEVIAVSVDGECKEVLLLLYR
EREAGLTPEIRAVCLGSETFEIVSSGGVPPARVVAEAPGTWLYEPDTAIIKARLTGELARQFHLEFLNRTVDYLTSDRLI
EPFPGRSFRIEECRPFRQKSFRKELAELEITNAAIQRRDFPLSVEELRKRYKIGESSERYLFFTKNATGSLIWLSCRKP
>Mature_398_residues
TLDELNRLLDPQVLALIDAHASDDPATFAMQFHGRGDLPVRAIAEQIACRKKAAAKLPSLSRFPMLYTRLGLEQASGERA
AEWKASLMRGWRAIDLTGGLGIDTLFLAQRFDSVVSCERNEALARLAEANRRMMGVTNVETLIGDSEELLAGYADDSFDW
VLVDPARREHGGRSAGLSASSPDVVRLHDMLLRKARRVCIKASPALEISGLETQLPTLSEVIAVSVDGECKEVLLLLYRE
REAGLTPEIRAVCLGSETFEIVSSGGVPPARVVAEAPGTWLYEPDTAIIKARLTGELARQFHLEFLNRTVDYLTSDRLIE
PFPGRSFRIEECRPFRQKSFRKELAELEITNAAIQRRDFPLSVEELRKRYKIGESSERYLFFTKNATGSLIWLSCRKP

Specific function: Could Be A 23s rRNA (Uracil-5-)-Methyltransferase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44550; Mature: 44418

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDELNRLLDPQVLALIDAHASDDPATFAMQFHGRGDLPVRAIAEQIACRKKAAAKLPS
CCHHHHHHHHCHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
LSRFPMLYTRLGLEQASGERAAEWKASLMRGWRAIDLTGGLGIDTLFLAQRFDSVVSCER
CCCCHHHHHHHCCHHCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCH
NEALARLAEANRRMMGVTNVETLIGDSEELLAGYADDSFDWVLVDPARREHGGRSAGLSA
HHHHHHHHHHCCCEECCCHHHHHHCCCHHHHEECCCCCCCEEEECCHHHHCCCCCCCCCC
SSPDVVRLHDMLLRKARRVCIKASPALEISGLETQLPTLSEVIAVSVDGECKEVLLLLYR
CCCCHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHEEEECCCHHHHHHHHHHH
EREAGLTPEIRAVCLGSETFEIVSSGGVPPARVVAEAPGTWLYEPDTAIIKARLTGELAR
HHCCCCCCCCEEEEECCHHHHHHHCCCCCHHHHEECCCCCEEECCCHHEEEHHHHHHHHH
QFHLEFLNRTVDYLTSDRLIEPFPGRSFRIEECRPFRQKSFRKELAELEITNAAIQRRDF
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PLSVEELRKRYKIGESSERYLFFTKNATGSLIWLSCRKP
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
TLDELNRLLDPQVLALIDAHASDDPATFAMQFHGRGDLPVRAIAEQIACRKKAAAKLPS
CHHHHHHHHCHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
LSRFPMLYTRLGLEQASGERAAEWKASLMRGWRAIDLTGGLGIDTLFLAQRFDSVVSCER
CCCCHHHHHHHCCHHCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCH
NEALARLAEANRRMMGVTNVETLIGDSEELLAGYADDSFDWVLVDPARREHGGRSAGLSA
HHHHHHHHHHCCCEECCCHHHHHHCCCHHHHEECCCCCCCEEEECCHHHHCCCCCCCCCC
SSPDVVRLHDMLLRKARRVCIKASPALEISGLETQLPTLSEVIAVSVDGECKEVLLLLYR
CCCCHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHEEEECCCHHHHHHHHHHH
EREAGLTPEIRAVCLGSETFEIVSSGGVPPARVVAEAPGTWLYEPDTAIIKARLTGELAR
HHCCCCCCCCEEEEECCHHHHHHHCCCCCHHHHEECCCCCEEECCCHHEEEHHHHHHHHH
QFHLEFLNRTVDYLTSDRLIEPFPGRSFRIEECRPFRQKSFRKELAELEITNAAIQRRDF
HHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PLSVEELRKRYKIGESSERYLFFTKNATGSLIWLSCRKP
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA