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The map label for this gene is kdsC [H]

Identifier: 21672928

GI number: 21672928

Start: 82260

End: 82832

Strand: Reverse

Name: kdsC [H]

Synonym: CT0087

Alternate gene names: 21672928

Gene position: 82832-82260 (Counterclockwise)

Preceding gene: 21672929

Following gene: 21672921

Centisome position: 3.84

GC content: 61.78

Gene sequence:

>573_bases
TTGAGCTCTTTCCAGTTTTTCGGTATGCAGCCCTACCAGGCTGATCCCTCTTCGCAGATCAACGCCGCCCTCGATAGCAT
CAAGGCGCTGGTCATCTCCCTCGACGGCGTCCTCACCAGCGGCGTGATCACTCTCGACGGCGAGGGGCGCGAAATGCCCA
CCCTTTTTGCCCGCGACCTGGCCGGACTCCGCGAGGCGCTGCGTCTCGGCATGAAGGTGGCGATCATCGCCGGGCGGCAG
GCCGGAGCCTTCCGCCAGATGCTCGAAGCCACAGGGCCAATCGATCTCTTCCTCGACGGCGAGGAGCGACTTGACGCTTA
CGAAGCATTCAAAAGCCGCCACGGCCTGCAGGACGATGAGTGTGCCTGCATTGCCGACGATATCGACGATCTGGAATTGC
TGAAAAAGGCCGGATTGCCAGTAACGCCGATCAATGGCGCGGAGTACCTCCGCAACCGCGTCGCCTACATCTCGGTATTC
GAAGGTGGACGCGGCTGCGTTCGCGAGATCGTCGAGATGGTGCTCGACCACCAGGGCCGCTGGAAGTACAGCGAAAAGCA
GGCTCAGGGGTAG

Upstream 100 bases:

>100_bases
GCTCGCCGGATTCGGCGAAATGGTGCGGGAGCTGATGCAGCTTCAGCGCTGCATGCAGTCGATCCGGGAAGAATTTCATT
CACGTTAACCAGATACACTC

Downstream 100 bases:

>100_bases
TTGAAAAGTCGAAATCGTTGCGCCGGTGAATCGATCCCGACATCGACAGGGAGTTCCAGAAAAAGACCTGCACTGCCAAG
CCAGTTAGAACCGGCCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSSFQFFGMQPYQADPSSQINAALDSIKALVISLDGVLTSGVITLDGEGREMPTLFARDLAGLREALRLGMKVAIIAGRQ
AGAFRQMLEATGPIDLFLDGEERLDAYEAFKSRHGLQDDECACIADDIDDLELLKKAGLPVTPINGAEYLRNRVAYISVF
EGGRGCVREIVEMVLDHQGRWKYSEKQAQG

Sequences:

>Translated_190_residues
MSSFQFFGMQPYQADPSSQINAALDSIKALVISLDGVLTSGVITLDGEGREMPTLFARDLAGLREALRLGMKVAIIAGRQ
AGAFRQMLEATGPIDLFLDGEERLDAYEAFKSRHGLQDDECACIADDIDDLELLKKAGLPVTPINGAEYLRNRVAYISVF
EGGRGCVREIVEMVLDHQGRWKYSEKQAQG
>Mature_189_residues
SSFQFFGMQPYQADPSSQINAALDSIKALVISLDGVLTSGVITLDGEGREMPTLFARDLAGLREALRLGMKVAIIAGRQA
GAFRQMLEATGPIDLFLDGEERLDAYEAFKSRHGLQDDECACIADDIDDLELLKKAGLPVTPINGAEYLRNRVAYISVFE
GGRGCVREIVEMVLDHQGRWKYSEKQAQG

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=152, Percent_Identity=28.2894736842105, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI2367202, Length=172, Percent_Identity=29.6511627906977, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 20844; Mature: 20713

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFQFFGMQPYQADPSSQINAALDSIKALVISLDGVLTSGVITLDGEGREMPTLFARDL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHH
AGLREALRLGMKVAIIAGRQAGAFRQMLEATGPIDLFLDGEERLDAYEAFKSRHGLQDDE
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCC
CACIADDIDDLELLKKAGLPVTPINGAEYLRNRVAYISVFEGGRGCVREIVEMVLDHQGR
CEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCC
WKYSEKQAQG
CCCCHHCCCC
>Mature Secondary Structure 
SSFQFFGMQPYQADPSSQINAALDSIKALVISLDGVLTSGVITLDGEGREMPTLFARDL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHH
AGLREALRLGMKVAIIAGRQAGAFRQMLEATGPIDLFLDGEERLDAYEAFKSRHGLQDDE
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCC
CACIADDIDDLELLKKAGLPVTPINGAEYLRNRVAYISVFEGGRGCVREIVEMVLDHQGR
CEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCC
WKYSEKQAQG
CCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]