| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672886
Identifier: 21672886
GI number: 21672886
Start: 42801
End: 43667
Strand: Direct
Name: 21672886
Synonym: CT0045
Alternate gene names: NA
Gene position: 42801-43667 (Clockwise)
Preceding gene: 21672885
Following gene: 21672896
Centisome position: 1.99
GC content: 55.25
Gene sequence:
>867_bases ATGGTCGTTGTTTTCAGGCGCTTTGTCGCTTTGTATGATAGGTTTGAGCTGCTCTGGGAAGACCAGCGCACGGAACGCAT GGCAGCCAATCTGCTGATTCTTGCGTTTGCCTTTTCGCTTGCCCTGATCGAGCTTGCCCGGCAGGGACTGCTTCCGGCAG AAGTTGCGGCCCGGGTGCCGAAAAGTCATTATTATGCCATCAATACAGCACTCTCCATGCTGCTTGGCCTCGAAGTGTTC GGATTGGTTTTCAGCATCGCCAAATCGGTTTCGGCGTCGGTCGGCAAGCAGTTTGAAATTCTTTCGCTCATTCTGCTGCG CCACTCCTTCAGCGAACTTGTCCATTTCAGCGAGCCGCTGGACGCGACGGAGGCGTCGCTGCCGGTGCTGTTCATGCTTG CCTATGCGGGCGGCGGTCTCCTAATTTTTCTCCTGCTCGGCGTCTATTACCGGCTCCAGCACCATCGCGCCATCACCCGT GACAAGGAGGCTGCGGCGGATTTCATCGTTGTGAAGAAGATTATCGCGCTCCTGCTCCTGTTGATCTTCTTCGTAATCGG CGTTATCGACGGATTGAAGTACCTGAACGGCAATGCCACGAACGAATTCTTTTCGCTTTTCTTCACGATTCTCATCTTCA GCGACGTGCTGCTGGTGCTGATCTCGTTGCGCTACAGTTCGAGTTATCCGGTTGTTTTCCGGAATTCCGGTTTCGCGGTC GCCACCTTGCTCATCAGGCTTGCCCTGACCGCGCCGCCCTGGTTCAGCGTACTGCTCGGCATCGGCGCGATCGCGTTTTC CATTGGGATCACCTTCGCCTACAACCGCTTCGAAAATCTGGAGATACAGCGCTCAGCGCCTATCTGA
Upstream 100 bases:
>100_bases AGTCGGTTAAGGCCGCCATCAGAAAGAATGAGTAGGTTTCGTTATTTTTGTGCCGTGGTGGAAAAATCCGGCTGTGACTT GCGGCCCCAAAAGCGGAACG
Downstream 100 bases:
>100_bases GCGAGCGCGGCCTTGTTCGTGGAGGTGCGCTGGTGTCTCTTGTCAGCTGGTGAGGTGCTGCTCGACGAGCGCCTGGCGGA GCACCTTGCCGAGAGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MVVVFRRFVALYDRFELLWEDQRTERMAANLLILAFAFSLALIELARQGLLPAEVAARVPKSHYYAINTALSMLLGLEVF GLVFSIAKSVSASVGKQFEILSLILLRHSFSELVHFSEPLDATEASLPVLFMLAYAGGGLLIFLLLGVYYRLQHHRAITR DKEAAADFIVVKKIIALLLLLIFFVIGVIDGLKYLNGNATNEFFSLFFTILIFSDVLLVLISLRYSSSYPVVFRNSGFAV ATLLIRLALTAPPWFSVLLGIGAIAFSIGITFAYNRFENLEIQRSAPI
Sequences:
>Translated_288_residues MVVVFRRFVALYDRFELLWEDQRTERMAANLLILAFAFSLALIELARQGLLPAEVAARVPKSHYYAINTALSMLLGLEVF GLVFSIAKSVSASVGKQFEILSLILLRHSFSELVHFSEPLDATEASLPVLFMLAYAGGGLLIFLLLGVYYRLQHHRAITR DKEAAADFIVVKKIIALLLLLIFFVIGVIDGLKYLNGNATNEFFSLFFTILIFSDVLLVLISLRYSSSYPVVFRNSGFAV ATLLIRLALTAPPWFSVLLGIGAIAFSIGITFAYNRFENLEIQRSAPI >Mature_288_residues MVVVFRRFVALYDRFELLWEDQRTERMAANLLILAFAFSLALIELARQGLLPAEVAARVPKSHYYAINTALSMLLGLEVF GLVFSIAKSVSASVGKQFEILSLILLRHSFSELVHFSEPLDATEASLPVLFMLAYAGGGLLIFLLLGVYYRLQHHRAITR DKEAAADFIVVKKIIALLLLLIFFVIGVIDGLKYLNGNATNEFFSLFFTILIFSDVLLVLISLRYSSSYPVVFRNSGFAV ATLLIRLALTAPPWFSVLLGIGAIAFSIGITFAYNRFENLEIQRSAPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32123; Mature: 32123
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVFRRFVALYDRFELLWEDQRTERMAANLLILAFAFSLALIELARQGLLPAEVAARVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC KSHYYAINTALSMLLGLEVFGLVFSIAKSVSASVGKQFEILSLILLRHSFSELVHFSEPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC DATEASLPVLFMLAYAGGGLLIFLLLGVYYRLQHHRAITRDKEAAADFIVVKKIIALLLL CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LIFFVIGVIDGLKYLNGNATNEFFSLFFTILIFSDVLLVLISLRYSSSYPVVFRNSGFAV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH ATLLIRLALTAPPWFSVLLGIGAIAFSIGITFAYNRFENLEIQRSAPI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVVVFRRFVALYDRFELLWEDQRTERMAANLLILAFAFSLALIELARQGLLPAEVAARVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC KSHYYAINTALSMLLGLEVFGLVFSIAKSVSASVGKQFEILSLILLRHSFSELVHFSEPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC DATEASLPVLFMLAYAGGGLLIFLLLGVYYRLQHHRAITRDKEAAADFIVVKKIIALLLL CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LIFFVIGVIDGLKYLNGNATNEFFSLFFTILIFSDVLLVLISLRYSSSYPVVFRNSGFAV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH ATLLIRLALTAPPWFSVLLGIGAIAFSIGITFAYNRFENLEIQRSAPI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA