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The map label for this gene is 21672858

Identifier: 21672858

GI number: 21672858

Start: 15585

End: 16733

Strand: Reverse

Name: 21672858

Synonym: CT0017

Alternate gene names: NA

Gene position: 16733-15585 (Counterclockwise)

Preceding gene: 21672859

Following gene: 21672857

Centisome position: 0.78

GC content: 53.44

Gene sequence:

>1149_bases
ATGAGGCATTTCCGGGTGTTCCTTCGCAAGCCCAAGCGGATCACTTCAGCAGCTCAGCCTCTCGAAACAGGCTCATCCGG
CTTGCACTTTTCTGCTGTAAACCCGCGCCAGGCCCCGGCCTCTTTTTTCCCGTCGTTGCGCCGGTTTACTGTACGTCTGA
CGGCAGCCCGTCAGGATCAATTGGTAAGTTATTTTTTCACCTGCTTCAAGGGAGTCTCTATGTCTCAATCGGTCATGAAA
AAGTCGGTGCTCAGGATTCTGCCCGGTCTCTTGTGTCTTGCATTGCCGCTCTCATCATGCTCGTCTTCAAAATCGCCAAA
AGCCACCATGACGGCCACTCCGGTCGAGTTGCGCTACCGCGAAGCCACCGAAAAGATCGCAAAACGGAAGTACAACGATG
CGATCGTCATTCTTGAGTCCCTCATGTTTTCGACCAGAGCGACCGCTCTCGAAGACGATGTGCTGAAGGCTCTTGCCGAC
TCCTATTACAAAAAGAAAGAGTACATCCTTGCCGCCGACACCTACCGCCGGCTGCTTCAGCAGACGCCGGACTCGCCCTA
TGCCAGAGACGCGCAGTTCATGCTTGCAAAATCGTACGAAAAGCTCTCGCCATTCCACGAGCTTGACCAGGAGTACACCG
TCAAGGCAATCAACGAATTCGAGACCTATCTCGACCAGTACCCTTCGGATGACTCCGCGCAGGCAGCCAACGATCTGGAG
CTGTACAAAAATCTGATGAAGGTCAATCCCGACAACGCCTCCTACCGTGAGAAGTACGAAGCGGCAAAGGAGGAACTCGC
GAGCGGCTCGCCGGCTCGATACAGCCAGAAGGCCATTTCCGAGCTTCGTGAGAGGCTTGCCCATAATCGCTTCTCGATCG
CCCGTCAATATTTCAAGCTAAAGAAGTACCGCGCCGCGGAGATTTTCTACGATGTGGTTATCAACCAGTATCCCGATACC
AAATGGCTCGAATCCGCCTGGATCGGAAAAATCGATTCAGAAATCAAGCAGAACAACTGGTTCGAAGCACGCCAGTCGAT
AGAGACCTTCCAGCAGCTTTATCCGGACAAGGCCAAGCTGATTGAGCCTGCCGCAAAGAGAGTTACCGCCCACTACTCAA
ACAAGCGCGACCCGAAATCGAAAGAGTGA

Upstream 100 bases:

>100_bases
GGTCAGGGGTTCGACTCCCCTAAGCTCCACAAAACCCTGCAGGTCTCATCCCGATTGCGGAAATCGTGACCCGAAAGCAG
GGCGCGGCGTTTTTCCCTGG

Downstream 100 bases:

>100_bases
GAACTGCTGTTTTCGGCGGAAGTTTCGATCCGCCGCACAACGGCCATCTCGCGCTGTCCCTCTTTGCGCGAGAGCTTGCC
GGGCTTGACCGGTTGATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Outer Membrane Assembly Lipoprotein YfiO; Tetratricopeptide TPR_2 Repeat Protein; Nuclear Transition Protein; DNA Uptake Lipoprotein-Like Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRHFRVFLRKPKRITSAAQPLETGSSGLHFSAVNPRQAPASFFPSLRRFTVRLTAARQDQLVSYFFTCFKGVSMSQSVMK
KSVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYREATEKIAKRKYNDAIVILESLMFSTRATALEDDVLKALAD
SYYKKKEYILAADTYRRLLQQTPDSPYARDAQFMLAKSYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLE
LYKNLMKVNPDNASYREKYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKLKKYRAAEIFYDVVINQYPDT
KWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPDKAKLIEPAAKRVTAHYSNKRDPKSKE

Sequences:

>Translated_382_residues
MRHFRVFLRKPKRITSAAQPLETGSSGLHFSAVNPRQAPASFFPSLRRFTVRLTAARQDQLVSYFFTCFKGVSMSQSVMK
KSVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYREATEKIAKRKYNDAIVILESLMFSTRATALEDDVLKALAD
SYYKKKEYILAADTYRRLLQQTPDSPYARDAQFMLAKSYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLE
LYKNLMKVNPDNASYREKYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKLKKYRAAEIFYDVVINQYPDT
KWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPDKAKLIEPAAKRVTAHYSNKRDPKSKE
>Mature_382_residues
MRHFRVFLRKPKRITSAAQPLETGSSGLHFSAVNPRQAPASFFPSLRRFTVRLTAARQDQLVSYFFTCFKGVSMSQSVMK
KSVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYREATEKIAKRKYNDAIVILESLMFSTRATALEDDVLKALAD
SYYKKKEYILAADTYRRLLQQTPDSPYARDAQFMLAKSYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLE
LYKNLMKVNPDNASYREKYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKLKKYRAAEIFYDVVINQYPDT
KWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPDKAKLIEPAAKRVTAHYSNKRDPKSKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44023; Mature: 44023

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHFRVFLRKPKRITSAAQPLETGSSGLHFSAVNPRQAPASFFPSLRRFTVRLTAARQDQ
CCHHHHHHHCCHHHHHHHCCHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LVSYFFTCFKGVSMSQSVMKKSVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHH
EATEKIAKRKYNDAIVILESLMFSTRATALEDDVLKALADSYYKKKEYILAADTYRRLLQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
QTPDSPYARDAQFMLAKSYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLE
HCCCCCCHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LYKNLMKVNPDNASYREKYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKL
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKYRAAEIFYDVVINQYPDTKWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPDKAKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHH
IEPAAKRVTAHYSNKRDPKSKE
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRHFRVFLRKPKRITSAAQPLETGSSGLHFSAVNPRQAPASFFPSLRRFTVRLTAARQDQ
CCHHHHHHHCCHHHHHHHCCHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LVSYFFTCFKGVSMSQSVMKKSVLRILPGLLCLALPLSSCSSSKSPKATMTATPVELRYR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHH
EATEKIAKRKYNDAIVILESLMFSTRATALEDDVLKALADSYYKKKEYILAADTYRRLLQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
QTPDSPYARDAQFMLAKSYEKLSPFHELDQEYTVKAINEFETYLDQYPSDDSAQAANDLE
HCCCCCCHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LYKNLMKVNPDNASYREKYEAAKEELASGSPARYSQKAISELRERLAHNRFSIARQYFKL
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKYRAAEIFYDVVINQYPDTKWLESAWIGKIDSEIKQNNWFEARQSIETFQQLYPDKAKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHH
IEPAAKRVTAHYSNKRDPKSKE
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA