Click here to switch to the map view.

The map label for this gene is atpH

Identifier: 21672859

GI number: 21672859

Start: 16990

End: 17535

Strand: Reverse

Name: atpH

Synonym: CT0018

Alternate gene names: 21672859

Gene position: 17535-16990 (Counterclockwise)

Preceding gene: 21672860

Following gene: 21672858

Centisome position: 0.81

GC content: 48.9

Gene sequence:

>546_bases
ATGTCAAGTGCAATTGCAAGCCGTCGATATGCGGTGGCCTTGCTCGAAGTGGCCGTTGAAGGCAACTTTCTGGAGAAAGT
TACCGAAGACCTGCAGAAAATACAGGAAGTGCTCTCTGGAAGTCATGAGCTCGTGCTGGCTCTCAAAAGCCCACTGATCA
ATGTCGATCTCAAATCGAAAATTCTCGAAGAGATTTTCAGGAACAAGGTCGATGAGAAAACGATGGTCTTTATCAAGCTG
CTCGCTCACAAGAAAAGGGCAGCTCTTCTTGCCGGAGTAATTTCTGAATTCAACGCCTTGATCGATGAACGCAATGGCGT
TATCAACGCCGATGTGAAAAGCGCAATCAAGCTCAGCGACGAACAGGCGAAAGAGCTGGTCAACAGCCTCTCAGTTCGTA
CAGGAAAGAAAATACGTGCCAAGATGCGGCTCGACGAGAACCTGATTGGCGGGGTAACCGTCAAAATCGGCGACACGATC
ATTGATGGCAGTATCAGCCATCAGCTTGAAATGCTCAGGCATTCACTGGTCGCTCAACCAGCTTGA

Upstream 100 bases:

>100_bases
TATTCGTACCACTCTTGATGCGGACAAGCAAAAAGCGGTGGTCAACGATATGATCAAGGAAATGGCTGCCAGTCGTAACT
GATAATAAAACCTCGGAACT

Downstream 100 bases:

>100_bases
TTCCGTAGCCTTCTGTTCAAAAAAAGCCTGCCGTTGAGCGGGCTTTTTTTGCATCGGTGAAAAAGATTATATTGTCCGCA
CGCGAAATAGCTGTAACTTG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSSAIASRRYAVALLEVAVEGNFLEKVTEDLQKIQEVLSGSHELVLALKSPLINVDLKSKILEEIFRNKVDEKTMVFIKL
LAHKKRAALLAGVISEFNALIDERNGVINADVKSAIKLSDEQAKELVNSLSVRTGKKIRAKMRLDENLIGGVTVKIGDTI
IDGSISHQLEMLRHSLVAQPA

Sequences:

>Translated_181_residues
MSSAIASRRYAVALLEVAVEGNFLEKVTEDLQKIQEVLSGSHELVLALKSPLINVDLKSKILEEIFRNKVDEKTMVFIKL
LAHKKRAALLAGVISEFNALIDERNGVINADVKSAIKLSDEQAKELVNSLSVRTGKKIRAKMRLDENLIGGVTVKIGDTI
IDGSISHQLEMLRHSLVAQPA
>Mature_180_residues
SSAIASRRYAVALLEVAVEGNFLEKVTEDLQKIQEVLSGSHELVLALKSPLINVDLKSKILEEIFRNKVDEKTMVFIKLL
AHKKRAALLAGVISEFNALIDERNGVINADVKSAIKLSDEQAKELVNSLSVRTGKKIRAKMRLDENLIGGVTVKIGDTII
DGSISHQLEMLRHSLVAQPA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_CHLTE (Q8KGF0)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_660924.1
- ProteinModelPortal:   Q8KGF0
- SMR:   Q8KGF0
- GeneID:   1006239
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT0018
- NMPDR:   fig|194439.1.peg.18
- TIGR:   CT0018
- HOGENOM:   HBG668108
- OMA:   NANKDFV
- ProtClustDB:   PRK05758
- BioCyc:   CTEP194439:CT_0018-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19894; Mature: 19762

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAIASRRYAVALLEVAVEGNFLEKVTEDLQKIQEVLSGSHELVLALKSPLINVDLKSK
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH
ILEEIFRNKVDEKTMVFIKLLAHKKRAALLAGVISEFNALIDERNGVINADVKSAIKLSD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCH
EQAKELVNSLSVRTGKKIRAKMRLDENLIGGVTVKIGDTIIDGSISHQLEMLRHSLVAQP
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCEEEEECCEEECCHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure 
SSAIASRRYAVALLEVAVEGNFLEKVTEDLQKIQEVLSGSHELVLALKSPLINVDLKSK
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH
ILEEIFRNKVDEKTMVFIKLLAHKKRAALLAGVISEFNALIDERNGVINADVKSAIKLSD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCH
EQAKELVNSLSVRTGKKIRAKMRLDENLIGGVTVKIGDTIIDGSISHQLEMLRHSLVAQP
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCEEEEECCEEECCHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12093901