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The map label for this gene is 15923875

Identifier: 15923875

GI number: 15923875

Start: 933511

End: 933951

Strand: Direct

Name: 15923875

Synonym: SAV0885

Alternate gene names: NA

Gene position: 933511-933951 (Clockwise)

Preceding gene: 15923874

Following gene: 15923876

Centisome position: 32.43

GC content: 33.11

Gene sequence:

>441_bases
ATGAACGAAAAACAAAAGAGATTCGCAGATGAATATATAATGAATGGATGTAATGGTAAAAAAGCAGCAATTTCAGCAGG
TTATAGTAAGAAAACAGCAGAGTCTTTAGCAAGTCGATTGTTAAGAAATGTTAATGTTTCGGAATATATTAAAGAACGAT
TAGAACAGATACAAGAAGAGCGTTTAATGAGTATTACAGAAGCTTTAGCGTTATCTGCTTCTATTGCTAGAGGAGAACCT
CAAGAGGCTTACAGTAAGAAATATGACCATTTAAACGATGAAGTGGAAAAAGAGGTTACTTACACAATCACACCAACTTT
TGAAGAGCGTCAGAGATCTATTGACCACATACTAAAAGTATATGGTGCGTATATCGATAAAAAAGAAATTACTCAGAAGA
ATATTGAGATTAATATTGGTGAGTACGATGACGAAAGTTAA

Upstream 100 bases:

>100_bases
TCGCAATTAGGAATAAAGGATCTATGTGGGTTGGCTGATTATAGCCAATCCCTTTTTTAATTTTAAAAAGCGTATAGCGC
GAGAGTTGGTGGTAAATGAA

Downstream 100 bases:

>100_bases
ATTAAACTTTAACAAACCATCTAATGTTTTCAATAGAAACATATTCGAAATACTAACCAATTACGATAACTTCACTGAAG
TACATTACGGTGGAGGTTCG

Product: small terminase

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Small Terminase; Phage Terminase Family Protein; Prophage; Terminase Subunit; Prophage Lp2 Protein

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNEKQKRFADEYIMNGCNGKKAAISAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEERLMSITEALALSASIARGEP
QEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKVYGAYIDKKEITQKNIEINIGEYDDES

Sequences:

>Translated_146_residues
MNEKQKRFADEYIMNGCNGKKAAISAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEERLMSITEALALSASIARGEP
QEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKVYGAYIDKKEITQKNIEINIGEYDDES
>Mature_146_residues
MNEKQKRFADEYIMNGCNGKKAAISAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEERLMSITEALALSASIARGEP
QEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKVYGAYIDKKEITQKNIEINIGEYDDES

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16819; Mature: 16819

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKQKRFADEYIMNGCNGKKAAISAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEE
CCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RLMSITEALALSASIARGEPQEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHEEEEECCCHHHHHHHHHHHHHH
YGAYIDKKEITQKNIEINIGEYDDES
HHHHHCHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MNEKQKRFADEYIMNGCNGKKAAISAGYSKKTAESLASRLLRNVNVSEYIKERLEQIQEE
CCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RLMSITEALALSASIARGEPQEAYSKKYDHLNDEVEKEVTYTITPTFEERQRSIDHILKV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHEEEEECCCHHHHHHHHHHHHHH
YGAYIDKKEITQKNIEINIGEYDDES
HHHHHCHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA