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The map label for this gene is yqaT [H]

Identifier: 15923876

GI number: 15923876

Start: 933938

End: 935215

Strand: Direct

Name: yqaT [H]

Synonym: SAV0886

Alternate gene names: 15923876

Gene position: 933938-935215 (Clockwise)

Preceding gene: 15923875

Following gene: 15923877

Centisome position: 32.44

GC content: 33.49

Gene sequence:

>1278_bases
ATGACGAAAGTTAAATTAAACTTTAACAAACCATCTAATGTTTTCAATAGAAACATATTCGAAATACTAACCAATTACGA
TAACTTCACTGAAGTACATTACGGTGGAGGTTCGAGCGGTAAGTCTCACGGCGTTATACAAAAAGTTGTACTTAAAGCAT
TGCAAGACTGGAAATATCCTAGGCGTATACTATGGCTTAGAAAAGTCCAATCAACAATTAAAGATAGTTTATTCGAAGAT
GTCAAAGATTGTTTGATAAACTTCGGTATTTGGGACATGTGCCTTTGGAATAAGACTGATAACAAAGTTGAATTGCCAAA
CGGCGCAGTTTTTTTGTTTAAAGGATTAGATAACCCAGAGAAAATAAAGTCGATAAAAGGCATATCAGACATAGTCATGG
AAGAAGCGTCTGAATTCACACTAAATGATTACACGCAATTAACGTTGCGTTTGAGGGAGCGTAAACACGTGAATAAGCAA
ATATTTTTGATGTTTAACCCAGTATCTAAACTGAATTGGGTTTATAAGTATTTCTTTGAACATGGTGAACCAATGGAAAA
TGTCATGATTAGACAATCTAGTTATCGAGATAATAAGTTTCTTGATGAAATGACACGACAAAACTTAGAGTTGTTAGCAA
ATCGTAATCCAGCATATTACAAAATTTATGCGTTAGGTGAATTTGCTACACTAGACAAAATGGTTTTCCCTAAGTATGAA
AAACGTTTAATAAATAAAGATGAGTTAAGACATTTACCTTCTTATTTTGGATTGGACTTTGGCTACGTTAATGATCCTAG
TGCTTTTATACATTCTAAAATAGATGTAAAGAAAAAGAAGTTATACATCATTGAAGAGTATGTTAAACAAGGTATGCTGA
ATGATGAAATAGCTAATGTCATAAAGCAACTTGGTTATGCTAAAGAAGAAATTACAGCAGATAGTGCAGAACAAAAAAGT
ATAGCTGAATTAAGGAATCTAGGGCTTAAAAGGATTTTACCAACCAAAAAAGGGAAGGGCTCGGTTGTACAAGGGTTACA
ATTCTTAATGCAATTTGAAATCATTGTTGATGAACGTTGTTTCAAGACTATTGAAGAGTTTGACAACTACACATGGCAAA
AGGACAAAGATACAGGTGAATATACCAATGAACCAGTAGATACATACAATCATTGTATCGATTCGTTGCGTTATTCAGTG
GAACGATTCTACAGACCGGTTAGAAAACGCACAAATGTCAGTTCGAAAGTTGACACAATAAAATCTCTAGGATTATAG

Upstream 100 bases:

>100_bases
CGTCAGAGATCTATTGACCACATACTAAAAGTATATGGTGCGTATATCGATAAAAAAGAAATTACTCAGAAGAATATTGA
GATTAATATTGGTGAGTACG

Downstream 100 bases:

>100_bases
GAGGGAACAAATGTTAAAAGTAAACGAATTTGAAACAGATACAGATCTACGGGGAAACATAAATTACTTATTTAATGATG
AAGCCAATGTTGTTTACACA

Product: large terminase

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTKVKLNFNKPSNVFNRNIFEILTNYDNFTEVHYGGGSSGKSHGVIQKVVLKALQDWKYPRRILWLRKVQSTIKDSLFED
VKDCLINFGIWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHVNKQ
IFLMFNPVSKLNWVYKYFFEHGEPMENVMIRQSSYRDNKFLDEMTRQNLELLANRNPAYYKIYALGEFATLDKMVFPKYE
KRLINKDELRHLPSYFGLDFGYVNDPSAFIHSKIDVKKKKLYIIEEYVKQGMLNDEIANVIKQLGYAKEEITADSAEQKS
IAELRNLGLKRILPTKKGKGSVVQGLQFLMQFEIIVDERCFKTIEEFDNYTWQKDKDTGEYTNEPVDTYNHCIDSLRYSV
ERFYRPVRKRTNVSSKVDTIKSLGL

Sequences:

>Translated_425_residues
MTKVKLNFNKPSNVFNRNIFEILTNYDNFTEVHYGGGSSGKSHGVIQKVVLKALQDWKYPRRILWLRKVQSTIKDSLFED
VKDCLINFGIWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHVNKQ
IFLMFNPVSKLNWVYKYFFEHGEPMENVMIRQSSYRDNKFLDEMTRQNLELLANRNPAYYKIYALGEFATLDKMVFPKYE
KRLINKDELRHLPSYFGLDFGYVNDPSAFIHSKIDVKKKKLYIIEEYVKQGMLNDEIANVIKQLGYAKEEITADSAEQKS
IAELRNLGLKRILPTKKGKGSVVQGLQFLMQFEIIVDERCFKTIEEFDNYTWQKDKDTGEYTNEPVDTYNHCIDSLRYSV
ERFYRPVRKRTNVSSKVDTIKSLGL
>Mature_424_residues
TKVKLNFNKPSNVFNRNIFEILTNYDNFTEVHYGGGSSGKSHGVIQKVVLKALQDWKYPRRILWLRKVQSTIKDSLFEDV
KDCLINFGIWDMCLWNKTDNKVELPNGAVFLFKGLDNPEKIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHVNKQI
FLMFNPVSKLNWVYKYFFEHGEPMENVMIRQSSYRDNKFLDEMTRQNLELLANRNPAYYKIYALGEFATLDKMVFPKYEK
RLINKDELRHLPSYFGLDFGYVNDPSAFIHSKIDVKKKKLYIIEEYVKQGMLNDEIANVIKQLGYAKEEITADSAEQKSI
AELRNLGLKRILPTKKGKGSVVQGLQFLMQFEIIVDERCFKTIEEFDNYTWQKDKDTGEYTNEPVDTYNHCIDSLRYSVE
RFYRPVRKRTNVSSKVDTIKSLGL

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 49931; Mature: 49800

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVKLNFNKPSNVFNRNIFEILTNYDNFTEVHYGGGSSGKSHGVIQKVVLKALQDWKYP
CCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH
RRILWLRKVQSTIKDSLFEDVKDCLINFGIWDMCLWNKTDNKVELPNGAVFLFKGLDNPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCEEECCCCCEEEEECCCCHH
KIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHVNKQIFLMFNPVSKLNWVYKYFFE
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
HGEPMENVMIRQSSYRDNKFLDEMTRQNLELLANRNPAYYKIYALGEFATLDKMVFPKYE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCHHH
KRLINKDELRHLPSYFGLDFGYVNDPSAFIHSKIDVKKKKLYIIEEYVKQGMLNDEIANV
HHCCCHHHHHHCHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHH
IKQLGYAKEEITADSAEQKSIAELRNLGLKRILPTKKGKGSVVQGLQFLMQFEIIVDERC
HHHHCCHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FKTIEEFDNYTWQKDKDTGEYTNEPVDTYNHCIDSLRYSVERFYRPVRKRTNVSSKVDTI
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KSLGL
HHCCC
>Mature Secondary Structure 
TKVKLNFNKPSNVFNRNIFEILTNYDNFTEVHYGGGSSGKSHGVIQKVVLKALQDWKYP
CEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH
RRILWLRKVQSTIKDSLFEDVKDCLINFGIWDMCLWNKTDNKVELPNGAVFLFKGLDNPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCEEECCCCCEEEEECCCCHH
KIKSIKGISDIVMEEASEFTLNDYTQLTLRLRERKHVNKQIFLMFNPVSKLNWVYKYFFE
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
HGEPMENVMIRQSSYRDNKFLDEMTRQNLELLANRNPAYYKIYALGEFATLDKMVFPKYE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCHHH
KRLINKDELRHLPSYFGLDFGYVNDPSAFIHSKIDVKKKKLYIIEEYVKQGMLNDEIANV
HHCCCHHHHHHCHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHH
IKQLGYAKEEITADSAEQKSIAELRNLGLKRILPTKKGKGSVVQGLQFLMQFEIIVDERC
HHHHCCHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FKTIEEFDNYTWQKDKDTGEYTNEPVDTYNHCIDSLRYSVERFYRPVRKRTNVSSKVDTI
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KSLGL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]