Click here to switch to the map view.

The map label for this gene is ocd-like2

Identifier: 15899941

GI number: 15899941

Start: 2985858

End: 2986814

Strand: Direct

Name: ocd-like2

Synonym: SSO3243

Alternate gene names: NA

Gene position: 2985858-2986814 (Clockwise)

Preceding gene: 15899939

Following gene: 15899942

Centisome position: 99.79

GC content: 33.86

Gene sequence:

>957_bases
TTGACACTACTGCTAAAAGAGAATGATGTAATAAATTTACTGGATTACAAACAAATTTATGGAGCGTTAGTTAATGCATT
TTTACTTTTTGAAAATAAATTTGCAATAAATTTAGAAAGAAGTAGAATCTCGTTTCACGGAACTACACTTACGTTTCAAG
CAGCAGGTATGGAAAATTACATTGGATATAAAACTTTCATTTCAGGTAACCATTTGACGTTTCTATATGACACCTCTGGT
AACTTACTAAGCATAATAGAGTCTGATAGACTTTCACAAGCTAGAACTGCTGTTTTATCAATTCTCGCCACAGATTACGT
TTATGGAGATTTTTCCTCTCTAGGAGTAATTGGTTTGGGAAAATATGGCCTAGCGATTGTTGAGATAGCAAACCAATTAA
AGAAAGGAATTAAAATTAATGTTTTCACTCCTTCACAACAACGAATGGAAAAGGCTCTATCGATATTAAGAGGTGAAGGT
ATAGATGTCTCACCGAAAGATTCAATTAAAAGAGTTTGTGAAGAAAGCGAAGTTGTAACGACAATAACTAAAGCTAAGGA
TCCGTTTTTGAAATTAGAATATGTAAATAATAAGAGAATACACATTAATGCAATGGGTTCCAATATACCAGAAAAGATTG
AGATTTTCCCAGAGGTAATAAAAGCGTCAAATTTGATTGTGGTCGAGGAACTAGAGCACGAGTTTAAAAGAATCCGGCGA
GTTAGTCATCGCAAGAGGATGGGAATGTTAGATATGAGTAAGATAACTCTCTTGTCATGGATATTATCTAGAAAGATTAA
CGTACAGAAAGAGGGAATAACCATTTTTAAATCTGTAGGTATAGGTCTTGAAGATTTAGCGGTAGGGAAACTCATCTATG
AAAAAGCTTTAAGCAAAGGTTTAGGTACTGAAATAGAGGTAAAGGGAGTTTGGTATCGAGAATCGGAAAAGAAATAG

Upstream 100 bases:

>100_bases
GCATATTTATTATATCTTGAAGCCTAGGAGTAAGTTCCATATCTAATAGCTTACCATAGAATGCCTTTTAAATATAGAGA
CATATCAAATTAAGAGAGAG

Downstream 100 bases:

>100_bases
AGATTTCACCAGTCGAATTAGGATCACAAATAGCTAAAAGAGTTAAAATTAACATGGCCAGCGGGACGCCGGATCCTAGG
AAAATGCCAATAAAGGAAAT

Product: ornithine cyclodeaminase related protein (ocd-like2)

Products: NA

Alternate protein names: Alanine Dehydrogenase; Ornithine Cyclodeaminase/Mu-Crystallin Family Protein; Ornithine Cyclodeaminase/Mu-Crystallin; Cyclodeaminase; Mu-Crystallin; Ornithine Cyclodeaminase Mu-Crystallin-Like Protein; L-Alanine Dehydrogenase; Ornithine Cyclodeaminase/Mu-Crystallin Family; Ectoine Utilization Protein EutC; Ornithine Cyclodeaminase Related Protein

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTLLLKENDVINLLDYKQIYGALVNAFLLFENKFAINLERSRISFHGTTLTFQAAGMENYIGYKTFISGNHLTFLYDTSG
NLLSIIESDRLSQARTAVLSILATDYVYGDFSSLGVIGLGKYGLAIVEIANQLKKGIKINVFTPSQQRMEKALSILRGEG
IDVSPKDSIKRVCEESEVVTTITKAKDPFLKLEYVNNKRIHINAMGSNIPEKIEIFPEVIKASNLIVVEELEHEFKRIRR
VSHRKRMGMLDMSKITLLSWILSRKINVQKEGITIFKSVGIGLEDLAVGKLIYEKALSKGLGTEIEVKGVWYRESEKK

Sequences:

>Translated_318_residues
MTLLLKENDVINLLDYKQIYGALVNAFLLFENKFAINLERSRISFHGTTLTFQAAGMENYIGYKTFISGNHLTFLYDTSG
NLLSIIESDRLSQARTAVLSILATDYVYGDFSSLGVIGLGKYGLAIVEIANQLKKGIKINVFTPSQQRMEKALSILRGEG
IDVSPKDSIKRVCEESEVVTTITKAKDPFLKLEYVNNKRIHINAMGSNIPEKIEIFPEVIKASNLIVVEELEHEFKRIRR
VSHRKRMGMLDMSKITLLSWILSRKINVQKEGITIFKSVGIGLEDLAVGKLIYEKALSKGLGTEIEVKGVWYRESEKK
>Mature_317_residues
TLLLKENDVINLLDYKQIYGALVNAFLLFENKFAINLERSRISFHGTTLTFQAAGMENYIGYKTFISGNHLTFLYDTSGN
LLSIIESDRLSQARTAVLSILATDYVYGDFSSLGVIGLGKYGLAIVEIANQLKKGIKINVFTPSQQRMEKALSILRGEGI
DVSPKDSIKRVCEESEVVTTITKAKDPFLKLEYVNNKRIHINAMGSNIPEKIEIFPEVIKASNLIVVEELEHEFKRIRRV
SHRKRMGMLDMSKITLLSWILSRKINVQKEGITIFKSVGIGLEDLAVGKLIYEKALSKGLGTEIEVKGVWYRESEKK

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI62241008, Length=237, Percent_Identity=25.3164556962025, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4503065, Length=237, Percent_Identity=25.3164556962025, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35857; Mature: 35726

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLLKENDVINLLDYKQIYGALVNAFLLFENKFAINLERSRISFHGTTLTFQAAGMENY
CEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECEEEEEEECCCCCC
IGYKTFISGNHLTFLYDTSGNLLSIIESDRLSQARTAVLSILATDYVYGDFSSLGVIGLG
CCEEEEECCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
KYGLAIVEIANQLKKGIKINVFTPSQQRMEKALSILRGEGIDVSPKDSIKRVCEESEVVT
CHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHEE
TITKAKDPFLKLEYVNNKRIHINAMGSNIPEKIEIFPEVIKASNLIVVEELEHEFKRIRR
EEHHCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
VSHRKRMGMLDMSKITLLSWILSRKINVQKEGITIFKSVGIGLEDLAVGKLIYEKALSKG
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
LGTEIEVKGVWYRESEKK
CCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
TLLLKENDVINLLDYKQIYGALVNAFLLFENKFAINLERSRISFHGTTLTFQAAGMENY
EEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECEEEEEEECCCCCC
IGYKTFISGNHLTFLYDTSGNLLSIIESDRLSQARTAVLSILATDYVYGDFSSLGVIGLG
CCEEEEECCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
KYGLAIVEIANQLKKGIKINVFTPSQQRMEKALSILRGEGIDVSPKDSIKRVCEESEVVT
CHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHEE
TITKAKDPFLKLEYVNNKRIHINAMGSNIPEKIEIFPEVIKASNLIVVEELEHEFKRIRR
EEHHCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
VSHRKRMGMLDMSKITLLSWILSRKINVQKEGITIFKSVGIGLEDLAVGKLIYEKALSKG
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
LGTEIEVKGVWYRESEKK
CCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA