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The map label for this gene is ybfF [C]

Identifier: 15899939

GI number: 15899939

Start: 2984729

End: 2985496

Strand: Direct

Name: ybfF [C]

Synonym: SSO3241

Alternate gene names: 15899939

Gene position: 2984729-2985496 (Clockwise)

Preceding gene: 15899938

Following gene: 15899941

Centisome position: 99.75

GC content: 32.68

Gene sequence:

>768_bases
TTGAAAAGAAGGGAAAGTTCGCCCTTAATCTCCACCATATTGGGGATAAGATATGGGAGATGTGTAATGGGTAACTTTTC
TATTGTTATACCCACTTATAATGAGAGAGACAATATTGTAAAACTAGTAGAGGAGATAAATAGGATAGTACCATATAATT
CCAGAATTCTTATAGTAGATGATAATAGCCCAGATGGAACAGCATTAATATTGCAAGAGTTAAACATTCATAACCTTACT
GTATTAATAAGACATAACGAAAGAGGCTTAGGATCAGCGTTAAGATATGGAATTAGTAAGGCGATAGAGCTAGAATCAGA
CTTCATAGTCACTATGGATGCGGACTTTAGTCATAATCCGAAATATTTACCAGAAATGATGAAAATTGCCTTAAATGAAA
ATTGCGACCTAGTTATAGGTTCTAGATATGTAATAGGAGGTGGAATAGAAAATTGGTCACTTAGTAGGAGAATTATAAGT
AAGGGAGCCAACTATCTGTTTAAGTTAGTTTCACATTCCCCAATCATGGATAATACGTCAAATTACAGAATATACTCACG
TAGAGCCGCACTATTGGCATTAGAATGTGATACCACAAATGGATATGAATTTCAAATATGCTCAATATTCAAAATTATAA
GGAATAACCTCAAGATTAAGGAATATCCCATCATCTTTGTAGATAGAAAAACTGGAAAAAGTAAACTTAATTTGAAGGAA
ATTTTAAATTGGTTCCTTTATATAATTAGGCTTTCCCTTTCTTTTTGA

Upstream 100 bases:

>100_bases
AACTGCGAATGTAAGGAGAATGAGATTGTTTTAGCGAAGACCAAGACAAATTTACCTGTTGCAGTATTAAGAGTTCTAAT
GCCAAAGGAGAAGGCTTTAG

Downstream 100 bases:

>100_bases
GCTTTTCCAACTCTCCTTTGATTGTATCTATCTCTTTCTTAAGTAAGGTTATCTCGTTCTCATGATTCTCCAATGTCTTC
AATAGTTTCATGCTGTCTAT

Product: dolichol-phosphate mannosyltransferase

Products: GDP; dolichyl D-mannosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKRRESSPLISTILGIRYGRCVMGNFSIVIPTYNERDNIVKLVEEINRIVPYNSRILIVDDNSPDGTALILQELNIHNLT
VLIRHNERGLGSALRYGISKAIELESDFIVTMDADFSHNPKYLPEMMKIALNENCDLVIGSRYVIGGGIENWSLSRRIIS
KGANYLFKLVSHSPIMDNTSNYRIYSRRAALLALECDTTNGYEFQICSIFKIIRNNLKIKEYPIIFVDRKTGKSKLNLKE
ILNWFLYIIRLSLSF

Sequences:

>Translated_255_residues
MKRRESSPLISTILGIRYGRCVMGNFSIVIPTYNERDNIVKLVEEINRIVPYNSRILIVDDNSPDGTALILQELNIHNLT
VLIRHNERGLGSALRYGISKAIELESDFIVTMDADFSHNPKYLPEMMKIALNENCDLVIGSRYVIGGGIENWSLSRRIIS
KGANYLFKLVSHSPIMDNTSNYRIYSRRAALLALECDTTNGYEFQICSIFKIIRNNLKIKEYPIIFVDRKTGKSKLNLKE
ILNWFLYIIRLSLSF
>Mature_255_residues
MKRRESSPLISTILGIRYGRCVMGNFSIVIPTYNERDNIVKLVEEINRIVPYNSRILIVDDNSPDGTALILQELNIHNLT
VLIRHNERGLGSALRYGISKAIELESDFIVTMDADFSHNPKYLPEMMKIALNENCDLVIGSRYVIGGGIENWSLSRRIIS
KGANYLFKLVSHSPIMDNTSNYRIYSRRAALLALECDTTNGYEFQICSIFKIIRNNLKIKEYPIIFVDRKTGKSKLNLKE
ILNWFLYIIRLSLSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=36.7521367521368, Blast_Score=145, Evalue=4e-35,
Organism=Escherichia coli, GI1788588, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71999402, Length=227, Percent_Identity=37.4449339207048, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6325441, Length=248, Percent_Identity=27.0161290322581, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24585265, Length=227, Percent_Identity=36.5638766519824, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.83

Molecular weight: Translated: 29286; Mature: 29286

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRESSPLISTILGIRYGRCVMGNFSIVIPTYNERDNIVKLVEEINRIVPYNSRILIVD
CCCCCCCCHHHHHHHHHCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE
DNSPDGTALILQELNIHNLTVLIRHNERGLGSALRYGISKAIELESDFIVTMDADFSHNP
CCCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHEEEECCCEEEEEECCCCCCC
KYLPEMMKIALNENCDLVIGSRYVIGGGIENWSLSRRIISKGANYLFKLVSHSPIMDNTS
HHHHHHHHHHHCCCCCEEECCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC
NYRIYSRRAALLALECDTTNGYEFQICSIFKIIRNNLKIKEYPIIFVDRKTGKSKLNLKE
CEEEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCHHH
ILNWFLYIIRLSLSF
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRRESSPLISTILGIRYGRCVMGNFSIVIPTYNERDNIVKLVEEINRIVPYNSRILIVD
CCCCCCCCHHHHHHHHHCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEE
DNSPDGTALILQELNIHNLTVLIRHNERGLGSALRYGISKAIELESDFIVTMDADFSHNP
CCCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHEEEECCCEEEEEECCCCCCC
KYLPEMMKIALNENCDLVIGSRYVIGGGIENWSLSRRIISKGANYLFKLVSHSPIMDNTS
HHHHHHHHHHHCCCCCEEECCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCC
NYRIYSRRAALLALECDTTNGYEFQICSIFKIIRNNLKIKEYPIIFVDRKTGKSKLNLKE
CEEEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCEEECCEEEEECCCCCCCCCHHH
ILNWFLYIIRLSLSF
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDPmannose; dolichyl phosphate

Specific reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]