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The map label for this gene is dapA-3 [H]

Identifier: 15899776

GI number: 15899776

Start: 2827669

End: 2828577

Strand: Reverse

Name: dapA-3 [H]

Synonym: SSO3072

Alternate gene names: 15899776

Gene position: 2828577-2827669 (Counterclockwise)

Preceding gene: 15899777

Following gene: 15899768

Centisome position: 94.53

GC content: 34.87

Gene sequence:

>909_bases
ATGAGATTAGAAGGTGTAGTAGTTCCATTAATCACACCCTTTTTAGAGGATTATTCAATAGATAAGGAAGGTCTTAAATG
GTTAGTATCTTACTTAAGTGAAAATGGGGTTAACGGAATATTCGTAAATTCAAGCGTAGGTGAGTTCGCAAGCTTAACTC
TAGACGAAATGAAACTAGTAACAAAGATAGCCTTAGATTCCAGAAAAAGTTACAGCACATTAATTTTCGCGGGAGCTTCT
ACTAACTTTACAGAGGAAACCATAAAGCTAGCTAAGGATTTTAAGGATATGGGAGTTGATGCAATAGTAGTAATGGCTCC
ATATTTCTTTAAGGTAAGAGAAAAAGAGTTGTTGGATCACTTTTCAATGATAGCTGAGAAAGTGGATCTTCCTATCATTA
TATACAATATACCCCTCTTCACCGGAATCGACATACCAATCTCAGTTTACAAGATGTTAGTATCTCAACACTCCAATATA
ATTGGAACTAAAGTAACCCTAGACAGCCTAATTTTCTTCAAGAAGTTGATTAGTGAAATAAGAGAAATAAGAAAGGACTT
TTCAATACTTACGGGGTTTGACGAGTACCTATTACCACTTCTATATATGGGTGGTAATGGTGGGGTAATGGGTCTAGCCA
ACGCCATCCCAAAGCTCCATTTGAAAGTGTACGAAAGTTGGAAAAATGGCAATCTTTCTGACGCTAATAAATACTGGAGA
AACGTATTAAACCTAACTGATATTTACGATTATTGTAACTCGTATACTGCATCAATTAAACTACTGCTTAAGGTATTGAA
TATGCCTATAAAAAACGTAGTAAGACCTCCTTTATCAATATGTGAAGAAGAGAGTAAAATACGAGGGATGATAAAAGATC
TTTCATCTTTTCTCACAAATAGCAAATAA

Upstream 100 bases:

>100_bases
GGTATAGCGACCACTTACGGACTTGAAGTATTGCTGGATATATTAGGAGGAGGGACTTTCTAATTAAAATATTAAAGCCG
TGTAGCGTTTATTTATATTT

Downstream 100 bases:

>100_bases
CCTAGTTGGTCCTCCCTCAGCACCAACGATTTTTAGAGGCGCATAGAAGAATAGTGCCTCACCATTTTTACACTCTTCTA
ACACTTTCTTCATATTGTTC

Product: dihydrodipicolinate synthase (dapA-3)

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRLEGVVVPLITPFLEDYSIDKEGLKWLVSYLSENGVNGIFVNSSVGEFASLTLDEMKLVTKIALDSRKSYSTLIFAGAS
TNFTEETIKLAKDFKDMGVDAIVVMAPYFFKVREKELLDHFSMIAEKVDLPIIIYNIPLFTGIDIPISVYKMLVSQHSNI
IGTKVTLDSLIFFKKLISEIREIRKDFSILTGFDEYLLPLLYMGGNGGVMGLANAIPKLHLKVYESWKNGNLSDANKYWR
NVLNLTDIYDYCNSYTASIKLLLKVLNMPIKNVVRPPLSICEEESKIRGMIKDLSSFLTNSK

Sequences:

>Translated_302_residues
MRLEGVVVPLITPFLEDYSIDKEGLKWLVSYLSENGVNGIFVNSSVGEFASLTLDEMKLVTKIALDSRKSYSTLIFAGAS
TNFTEETIKLAKDFKDMGVDAIVVMAPYFFKVREKELLDHFSMIAEKVDLPIIIYNIPLFTGIDIPISVYKMLVSQHSNI
IGTKVTLDSLIFFKKLISEIREIRKDFSILTGFDEYLLPLLYMGGNGGVMGLANAIPKLHLKVYESWKNGNLSDANKYWR
NVLNLTDIYDYCNSYTASIKLLLKVLNMPIKNVVRPPLSICEEESKIRGMIKDLSSFLTNSK
>Mature_302_residues
MRLEGVVVPLITPFLEDYSIDKEGLKWLVSYLSENGVNGIFVNSSVGEFASLTLDEMKLVTKIALDSRKSYSTLIFAGAS
TNFTEETIKLAKDFKDMGVDAIVVMAPYFFKVREKELLDHFSMIAEKVDLPIIIYNIPLFTGIDIPISVYKMLVSQHSNI
IGTKVTLDSLIFFKKLISEIREIRKDFSILTGFDEYLLPLLYMGGNGGVMGLANAIPKLHLKVYESWKNGNLSDANKYWR
NVLNLTDIYDYCNSYTASIKLLLKVLNMPIKNVVRPPLSICEEESKIRGMIKDLSSFLTNSK

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=238, Percent_Identity=27.3109243697479, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI13540533, Length=288, Percent_Identity=28.4722222222222, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1786463, Length=282, Percent_Identity=31.5602836879433, Blast_Score=181, Evalue=6e-47,
Organism=Escherichia coli, GI87082415, Length=286, Percent_Identity=30.7692307692308, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1788823, Length=233, Percent_Identity=30.9012875536481, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789620, Length=253, Percent_Identity=28.0632411067194, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 34099; Mature: 34099

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEGVVVPLITPFLEDYSIDKEGLKWLVSYLSENGVNGIFVNSSVGEFASLTLDEMKLV
CCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
TKIALDSRKSYSTLIFAGASTNFTEETIKLAKDFKDMGVDAIVVMAPYFFKVREKELLDH
HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FSMIAEKVDLPIIIYNIPLFTGIDIPISVYKMLVSQHSNIIGTKVTLDSLIFFKKLISEI
HHHHHHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
REIRKDFSILTGFDEYLLPLLYMGGNGGVMGLANAIPKLHLKVYESWKNGNLSDANKYWR
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
NVLNLTDIYDYCNSYTASIKLLLKVLNMPIKNVVRPPLSICEEESKIRGMIKDLSSFLTN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
SK
CC
>Mature Secondary Structure
MRLEGVVVPLITPFLEDYSIDKEGLKWLVSYLSENGVNGIFVNSSVGEFASLTLDEMKLV
CCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
TKIALDSRKSYSTLIFAGASTNFTEETIKLAKDFKDMGVDAIVVMAPYFFKVREKELLDH
HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FSMIAEKVDLPIIIYNIPLFTGIDIPISVYKMLVSQHSNIIGTKVTLDSLIFFKKLISEI
HHHHHHHCCCCEEEEECCHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
REIRKDFSILTGFDEYLLPLLYMGGNGGVMGLANAIPKLHLKVYESWKNGNLSDANKYWR
HHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
NVLNLTDIYDYCNSYTASIKLLLKVLNMPIKNVVRPPLSICEEESKIRGMIKDLSSFLTN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA