| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is yeiK [C]
Identifier: 15899768
GI number: 15899768
Start: 2818016
End: 2818387
Strand: Reverse
Name: yeiK [C]
Synonym: SSO3062
Alternate gene names: 15899768
Gene position: 2818387-2818016 (Counterclockwise)
Preceding gene: 15899776
Following gene: 15899767
Centisome position: 94.19
GC content: 34.14
Gene sequence:
>372_bases ATGGGCTTTAGAGTTTCTAAATATCGATATTCCAGTATATCCAATTCAAAAAGACCACTAGTTAAGTCTTTTAAAACCGT AGAAGATGTTCATGGAAAGGGAGGAGTAGGAAATGAGATTGTGAAACCAATAAGACTTAAGGCACAAAGTAAGCATGCTT TTGATGCTATAACAGAGTTATGTGAAACGTATTTTAAGGTATTAGAGTTTTTAGCTATCTCTCCGTTAACTAATTTAGCC TTAGCATATCTAAAGTATCCTAGATTAACTGAATGTATACATCACCTATACATTATGGGTGGTACAATCTATGGAAGAGG CAACATTACACCCATAGCAGAATATAATTTTTGGGTAGACCAGATGCAGTAA
Upstream 100 bases:
>100_bases TAATGAGTTTGATAATGCTGATTAAAAACAATATACAAGTTGTCGGGATTACTATTGTTGAAGGTAATGTAAACTTTAAT CAGCAAGTAGACACTATGTT
Downstream 100 bases:
>100_bases AGATAGCATTACACGCTGGTTTCACCAACGTAACATTAGTTCCTTGGGAGGTTGCAGTGGCTAATGCTATTGATCCTAAT ATATGAAATTTCATAAAATC
Product: hypothetical protein
Products: cytosine; ribose; uracil [C]
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MGFRVSKYRYSSISNSKRPLVKSFKTVEDVHGKGGVGNEIVKPIRLKAQSKHAFDAITELCETYFKVLEFLAISPLTNLA LAYLKYPRLTECIHHLYIMGGTIYGRGNITPIAEYNFWVDQMQ
Sequences:
>Translated_123_residues MGFRVSKYRYSSISNSKRPLVKSFKTVEDVHGKGGVGNEIVKPIRLKAQSKHAFDAITELCETYFKVLEFLAISPLTNLA LAYLKYPRLTECIHHLYIMGGTIYGRGNITPIAEYNFWVDQMQ >Mature_122_residues GFRVSKYRYSSISNSKRPLVKSFKTVEDVHGKGGVGNEIVKPIRLKAQSKHAFDAITELCETYFKVLEFLAISPLTNLAL AYLKYPRLTECIHHLYIMGGTIYGRGNITPIAEYNFWVDQMQ
Specific function: Unknown
COG id: COG1957
COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IUNH family [H]
Homologues:
Organism=Escherichia coli, GI1788486, Length=103, Percent_Identity=29.126213592233, Blast_Score=64, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641837, Length=95, Percent_Identity=38.9473684210526, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015910 - InterPro: IPR023186 - InterPro: IPR001910 [H]
Pfam domain/function: PF01156 IU_nuc_hydro [H]
EC number: NA
Molecular weight: Translated: 14035; Mature: 13903
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRVSKYRYSSISNSKRPLVKSFKTVEDVHGKGGVGNEIVKPIRLKAQSKHAFDAITEL CCCCCCHHECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH CETYFKVLEFLAISPLTNLALAYLKYPRLTECIHHLYIMGGTIYGRGNITPIAEYNFWVD HHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCCEEECCCCCCC QMQ CCC >Mature Secondary Structure GFRVSKYRYSSISNSKRPLVKSFKTVEDVHGKGGVGNEIVKPIRLKAQSKHAFDAITEL CCCCCHHECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH CETYFKVLEFLAISPLTNLALAYLKYPRLTECIHHLYIMGGTIYGRGNITPIAEYNFWVD HHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCCEEECCCCCCC QMQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: cytidine; H2O; uridine [C]
Specific reaction: cytidine + H2O = cytosine + ribose uridine + H2O = uracil + ribose [C]
General reaction: Pyrimidine-specific nucleoside hydrolase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA