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The map label for this gene is crtB [H]

Identifier: 15899619

GI number: 15899619

Start: 2656137

End: 2656970

Strand: Reverse

Name: crtB [H]

Synonym: SSO2905

Alternate gene names: 15899619

Gene position: 2656970-2656137 (Counterclockwise)

Preceding gene: 15899622

Following gene: 15899618

Centisome position: 88.8

GC content: 34.77

Gene sequence:

>834_bases
ATGATTGAAAAACTTGAAGAGATCTTTAAGAAGGGAAGCGTTACATATTATAATAGCTCTTATTTCTTTCCAAAAAAGAT
TAGGGAAGATGTAACTAAACTTTACGCCTTTGTAAGGGTATTTGACGATCTTGTCGATTCTGTTCCACAGAAAATAGAGG
AATATTATAACTTGCGAAAGCTCTATCAATTAGAGAAGAGTGGTTATAATACTGGAAATATTGTATTGCAAAATTTCGTT
GAGCTAGCTAGGAGAAAAGGATTTGAGGACAGTTGGATAGATGCTTTTCTAGATGCAATGGAAAGTGACATATATAAGAA
AGTGTATTACAGTATTGAGGAACTTTTGAAGTACATGTATGGTTCTGCTGAAGTAGTTGGTCTATTCATGATGAAGATTC
TAGATTTACATAATGACTCAATGTACTATGCCAGAATGCTTGGAAGAGCAATGCAGTTTTTAAATTTCATCAGAGACGTC
CAAGAGGACCTGTATTTAGGCAGACAATACTTACCCGTTGAAGATATGGAGAAATTTGGAATTGACAAGATGGAGTGTAA
TGAAGGTTTTATAGAATTCATAAGATACGAAATTAGCCGTTACTTTGAATTTGAAAGGGAGGCAGAAAAGGGGTTTAAGT
TCATACCAGCTAGATACTTAGTTCCCATAAAGACTGCTTCAGAAATGTATAAGTGGTCTGCGTTGAGGATAAAGAAGTCT
CCGTGTATCGTATTATCAAAAAAGGTAAAGCCTAGAAGGACGAAAATAGTGATAACTGTAATAAAGAATTTCGCTGGCGT
CTATCTATGGAGATCTTTAAACCCGATTATTTGA

Upstream 100 bases:

>100_bases
TATATGTAAGAGTGTTTTTTACATTCTAATAAATAGTCATATTAAGACTTGTCTAATACAAAGATTTAGCTACTTTAACG
GGTTTTAAGCTTGAGAGTAA

Downstream 100 bases:

>100_bases
TGATAGACTCAATGATTTTCTTTCCAACTCTGATTCTTTCGTTTTTAATTAAGAGAAATTACGTAAAGCTTTTGAAGTCG
ATTGGAATCGTTTCCCCAAT

Product: phytoene synthetase (crtB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIEKLEEIFKKGSVTYYNSSYFFPKKIREDVTKLYAFVRVFDDLVDSVPQKIEEYYNLRKLYQLEKSGYNTGNIVLQNFV
ELARRKGFEDSWIDAFLDAMESDIYKKVYYSIEELLKYMYGSAEVVGLFMMKILDLHNDSMYYARMLGRAMQFLNFIRDV
QEDLYLGRQYLPVEDMEKFGIDKMECNEGFIEFIRYEISRYFEFEREAEKGFKFIPARYLVPIKTASEMYKWSALRIKKS
PCIVLSKKVKPRRTKIVITVIKNFAGVYLWRSLNPII

Sequences:

>Translated_277_residues
MIEKLEEIFKKGSVTYYNSSYFFPKKIREDVTKLYAFVRVFDDLVDSVPQKIEEYYNLRKLYQLEKSGYNTGNIVLQNFV
ELARRKGFEDSWIDAFLDAMESDIYKKVYYSIEELLKYMYGSAEVVGLFMMKILDLHNDSMYYARMLGRAMQFLNFIRDV
QEDLYLGRQYLPVEDMEKFGIDKMECNEGFIEFIRYEISRYFEFEREAEKGFKFIPARYLVPIKTASEMYKWSALRIKKS
PCIVLSKKVKPRRTKIVITVIKNFAGVYLWRSLNPII
>Mature_277_residues
MIEKLEEIFKKGSVTYYNSSYFFPKKIREDVTKLYAFVRVFDDLVDSVPQKIEEYYNLRKLYQLEKSGYNTGNIVLQNFV
ELARRKGFEDSWIDAFLDAMESDIYKKVYYSIEELLKYMYGSAEVVGLFMMKILDLHNDSMYYARMLGRAMQFLNFIRDV
QEDLYLGRQYLPVEDMEKFGIDKMECNEGFIEFIRYEISRYFEFEREAEKGFKFIPARYLVPIKTASEMYKWSALRIKKS
PCIVLSKKVKPRRTKIVITVIKNFAGVYLWRSLNPII

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33131; Mature: 33131

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKLEEIFKKGSVTYYNSSYFFPKKIREDVTKLYAFVRVFDDLVDSVPQKIEEYYNLRK
CHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQLEKSGYNTGNIVLQNFVELARRKGFEDSWIDAFLDAMESDIYKKVYYSIEELLKYMY
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAEVVGLFMMKILDLHNDSMYYARMLGRAMQFLNFIRDVQEDLYLGRQYLPVEDMEKFG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
IDKMECNEGFIEFIRYEISRYFEFEREAEKGFKFIPARYLVPIKTASEMYKWSALRIKKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHEEEHHHHHHHHHHHHHEEECC
PCIVLSKKVKPRRTKIVITVIKNFAGVYLWRSLNPII
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEKLEEIFKKGSVTYYNSSYFFPKKIREDVTKLYAFVRVFDDLVDSVPQKIEEYYNLRK
CHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQLEKSGYNTGNIVLQNFVELARRKGFEDSWIDAFLDAMESDIYKKVYYSIEELLKYMY
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSAEVVGLFMMKILDLHNDSMYYARMLGRAMQFLNFIRDVQEDLYLGRQYLPVEDMEKFG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
IDKMECNEGFIEFIRYEISRYFEFEREAEKGFKFIPARYLVPIKTASEMYKWSALRIKKS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHEEEHHHHHHHHHHHHHEEECC
PCIVLSKKVKPRRTKIVITVIKNFAGVYLWRSLNPII
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]