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The map label for this gene is fdhD

Identifier: 15899537

GI number: 15899537

Start: 2582577

End: 2583350

Strand: Reverse

Name: fdhD

Synonym: SSO2821

Alternate gene names: 15899537

Gene position: 2583350-2582577 (Counterclockwise)

Preceding gene: 15899538

Following gene: 15899536

Centisome position: 86.33

GC content: 35.27

Gene sequence:

>774_bases
TTGGGAGTGCGAGTAAAGAGGTTTGACTTAGTAAGGGTTAAGGATAGTGAGGCATATAAGGATAGTGATTTTGTTGCAGT
AGAAGAACCATTAAATATAAGGACTTGTTTTGAGAAGTGTGAAGACTTCGCGATAATAATGAGAACACCGGGAGATGATA
AAGAACTTTCGCTAGGTTTTTTATACTCAGAAGGTGTTATAAACTCTATTCATGACGTTGAGGATATTAAGCAAGTAGAG
AATAACGTTATAGAGGTTAAATTAAATAAACCTATTGGAATAAGAATAAGAGAGTTAATTGTAAATTCAAGCTGTGGAGT
TTGCGGTAGGGCTTTCCTCTACACATTAAATATACTTAAATCTGATTTAAAAGTCAAAAGAGAGGTCATTTTTTCATTTC
CAGAAAAATTAAGGGAAAAACAAAGTGTCTTCAACATTAGCGGAGGTCTTCATGCAACTGCATTATTTAACCCTCAAGGA
GAATTATTATTTATATATGAGGACGTGGGGAGACATAACGCTGTTGATAAGGTAGTTGGTAGATTATTGCTGGAGGATAA
GATCCCAGCAAGTAATTATATTATGCAAGTTAGCGGTAGATTAGGATATGAGATCGTTAGCAAAGGGATAAAAGCGGGAA
TACCGATAATCTGTGGAATTTCAGCCCCCACTAGTCTAGCTATTGAAATTGCCGAAGAAGCTGGATTAACTCTTATAGGT
TTTCTCCGAGGAAAAAGTTTAAACATTTACACTCATAGTGAAAGGATATATTAG

Upstream 100 bases:

>100_bases
GAAGAAGCTAAGGATATCAGTTTAACTGAATTAACTAAACAGCTTAACGACCCAGATGTGAAGAGAGGATTATATTTGTT
ACTAAAGATACTTAAGGCGA

Downstream 100 bases:

>100_bases
ATTAACTTTTACAACATAAATAATAGGTAGTATTTTAAGCCTATTTAACAAAATGTAATTTATGAACTATACATACTTAC
TAGACGAAGTTAGTTTGTCA

Product: FDHD protein homolog (fdhD)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGVRVKRFDLVRVKDSEAYKDSDFVAVEEPLNIRTCFEKCEDFAIIMRTPGDDKELSLGFLYSEGVINSIHDVEDIKQVE
NNVIEVKLNKPIGIRIRELIVNSSCGVCGRAFLYTLNILKSDLKVKREVIFSFPEKLREKQSVFNISGGLHATALFNPQG
ELLFIYEDVGRHNAVDKVVGRLLLEDKIPASNYIMQVSGRLGYEIVSKGIKAGIPIICGISAPTSLAIEIAEEAGLTLIG
FLRGKSLNIYTHSERIY

Sequences:

>Translated_257_residues
MGVRVKRFDLVRVKDSEAYKDSDFVAVEEPLNIRTCFEKCEDFAIIMRTPGDDKELSLGFLYSEGVINSIHDVEDIKQVE
NNVIEVKLNKPIGIRIRELIVNSSCGVCGRAFLYTLNILKSDLKVKREVIFSFPEKLREKQSVFNISGGLHATALFNPQG
ELLFIYEDVGRHNAVDKVVGRLLLEDKIPASNYIMQVSGRLGYEIVSKGIKAGIPIICGISAPTSLAIEIAEEAGLTLIG
FLRGKSLNIYTHSERIY
>Mature_256_residues
GVRVKRFDLVRVKDSEAYKDSDFVAVEEPLNIRTCFEKCEDFAIIMRTPGDDKELSLGFLYSEGVINSIHDVEDIKQVEN
NVIEVKLNKPIGIRIRELIVNSSCGVCGRAFLYTLNILKSDLKVKREVIFSFPEKLREKQSVFNISGGLHATALFNPQGE
LLFIYEDVGRHNAVDKVVGRLLLEDKIPASNYIMQVSGRLGYEIVSKGIKAGIPIICGISAPTSLAIEIAEEAGLTLIGF
LRGKSLNIYTHSERIY

Specific function: Necessary for formate dehydrogenase activity

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family

Homologues:

Organism=Escherichia coli, GI1790329, Length=272, Percent_Identity=31.9852941176471, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHD_SULSO (Q97V15)

Other databases:

- EMBL:   AE006641
- PIR:   E90459
- RefSeq:   NP_344142.1
- ProteinModelPortal:   Q97V15
- SMR:   Q97V15
- GeneID:   1452851
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO2821
- NMPDR:   fig|273057.1.peg.2565
- HOGENOM:   HBG732883
- OMA:   ELRMWLA
- PhylomeDB:   Q97V15
- ProtClustDB:   CLSK803533
- BioCyc:   SSOL273057:SSO2821-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00187
- InterPro:   IPR003786
- TIGRFAMs:   TIGR00129

Pfam domain/function: PF02634 FdhD-NarQ

EC number: NA

Molecular weight: Translated: 28712; Mature: 28580

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRVKRFDLVRVKDSEAYKDSDFVAVEEPLNIRTCFEKCEDFAIIMRTPGDDKELSLGF
CCCEEEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEECCCCCCCEEEEE
LYSEGVINSIHDVEDIKQVENNVIEVKLNKPIGIRIRELIVNSSCGVCGRAFLYTLNILK
EECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
SDLKVKREVIFSFPEKLREKQSVFNISGGLHATALFNPQGELLFIYEDVGRHNAVDKVVG
HHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHH
RLLLEDKIPASNYIMQVSGRLGYEIVSKGIKAGIPIICGISAPTSLAIEIAEEAGLTLIG
HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEHHHCCCEEEE
FLRGKSLNIYTHSERIY
EECCCEEEEEECCCCCC
>Mature Secondary Structure 
GVRVKRFDLVRVKDSEAYKDSDFVAVEEPLNIRTCFEKCEDFAIIMRTPGDDKELSLGF
CCEEEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEECCCCCCCEEEEE
LYSEGVINSIHDVEDIKQVENNVIEVKLNKPIGIRIRELIVNSSCGVCGRAFLYTLNILK
EECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
SDLKVKREVIFSFPEKLREKQSVFNISGGLHATALFNPQGELLFIYEDVGRHNAVDKVVG
HHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHH
RLLLEDKIPASNYIMQVSGRLGYEIVSKGIKAGIPIICGISAPTSLAIEIAEEAGLTLIG
HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEHHHCCCEEEE
FLRGKSLNIYTHSERIY
EECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726