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The map label for this gene is etfB [H]

Identifier: 15899479

GI number: 15899479

Start: 2520491

End: 2521219

Strand: Reverse

Name: etfB [H]

Synonym: SSO2763

Alternate gene names: 15899479

Gene position: 2521219-2520491 (Counterclockwise)

Preceding gene: 15899483

Following gene: 15899478

Centisome position: 84.26

GC content: 36.49

Gene sequence:

>729_bases
ATGAACATTATTGTTGGTTTTAAGATAGTTCCGGACGATCAAATGATTAAGGTTGTGGGAGATAAACTAAATACTGACGC
TCCATTGAAGGTAAGCACTTATGATAAGAACGCTATTGAAGAGGCTATACGGTTAAAGGAAAAGTTCGGAGGTAAGGTTA
CTGGTATTACAGTAGGCAATAACGATAGAAAGAGCATTAGGGAAGCTTTAGCTATGGGAGTTGATGAAGTAATAGCAATA
TTAGTTAAAGATCCGGACGTTTACGTTACCGCTATGGCGATAGCTGAAAATGTGAAGACCCTAAATCCAGATATAATATT
GTTTTCAGAAATGACAACTGATAGCGGAACTTCGGCCTTACCAGCTTATGTTTCCGAACTCCTTGGCCTACCTTATATTT
CTAACGTAAAATCACTAAAAATCGAGGGAAACAAGGTTGTGGCAGATAGGGGAATGGTAAGCTATCTTGAGACTGTAGAA
TCAAGTTTGCCTATAATTGTTAGTGTTGGTGGCGAAATAAATACTCCCAGAATTCCCAGCGTTAAGCAAATCATGGAATC
GTCTAAGAAACCAGTTAAAGAAGTTAAATTCGACGCACAATCTAAGGTTAGAATAAGGGAAATTAAACCAATGATTGTGA
ATAGAAAGAGAATAGTTATTGAAGAGAGCGATATTAATAAAGCTGTTGATAAATTAATTGAATATTTAAAGTCTGATGGG
GTGATCTAA

Upstream 100 bases:

>100_bases
TCATAATCTCACATTATATTTCTTTTTAACGCTAAAAAGTTTTGCTTAAAATATCAGAAATTGTGACTAGTTTTATAAAT
AGTCAATCTGAAATTAAAAT

Downstream 100 bases:

>100_bases
TATGAAAACTGTAGTGTTCTCGGAAAGTCCGGTATTCTTGAGAATGGCGGCAGCTGTAGCTCAAAGCTTCGGGGGAGAAG
TAATAGGAATATCCGACAAT

Product: electron transfer flavoprotein subunit beta EtfB

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNIIVGFKIVPDDQMIKVVGDKLNTDAPLKVSTYDKNAIEEAIRLKEKFGGKVTGITVGNNDRKSIREALAMGVDEVIAI
LVKDPDVYVTAMAIAENVKTLNPDIILFSEMTTDSGTSALPAYVSELLGLPYISNVKSLKIEGNKVVADRGMVSYLETVE
SSLPIIVSVGGEINTPRIPSVKQIMESSKKPVKEVKFDAQSKVRIREIKPMIVNRKRIVIEESDINKAVDKLIEYLKSDG
VI

Sequences:

>Translated_242_residues
MNIIVGFKIVPDDQMIKVVGDKLNTDAPLKVSTYDKNAIEEAIRLKEKFGGKVTGITVGNNDRKSIREALAMGVDEVIAI
LVKDPDVYVTAMAIAENVKTLNPDIILFSEMTTDSGTSALPAYVSELLGLPYISNVKSLKIEGNKVVADRGMVSYLETVE
SSLPIIVSVGGEINTPRIPSVKQIMESSKKPVKEVKFDAQSKVRIREIKPMIVNRKRIVIEESDINKAVDKLIEYLKSDG
VI
>Mature_242_residues
MNIIVGFKIVPDDQMIKVVGDKLNTDAPLKVSTYDKNAIEEAIRLKEKFGGKVTGITVGNNDRKSIREALAMGVDEVIAI
LVKDPDVYVTAMAIAENVKTLNPDIILFSEMTTDSGTSALPAYVSELLGLPYISNVKSLKIEGNKVVADRGMVSYLETVE
SSLPIIVSVGGEINTPRIPSVKQIMESSKKPVKEVKFDAQSKVRIREIKPMIVNRKRIVIEESDINKAVDKLIEYLKSDG
VI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=32.2834645669291, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081682, Length=241, Percent_Identity=31.1203319502075, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26560; Mature: 26560

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIVGFKIVPDDQMIKVVGDKLNTDAPLKVSTYDKNAIEEAIRLKEKFGGKVTGITVGN
CEEEEEEEECCCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEEEECC
NDRKSIREALAMGVDEVIAILVKDPDVYVTAMAIAENVKTLNPDIILFSEMTTDSGTSAL
CCHHHHHHHHHHCHHHHHEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
PAYVSELLGLPYISNVKSLKIEGNKVVADRGMVSYLETVESSLPIIVSVGGEINTPRIPS
HHHHHHHHCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCH
VKQIMESSKKPVKEVKFDAQSKVRIREIKPMIVNRKRIVIEESDINKAVDKLIEYLKSDG
HHHHHHHCCCCHHHHCCCCCCCEEHHHHCHHHCCCEEEEEECCHHHHHHHHHHHHHHHCC
VI
CC
>Mature Secondary Structure
MNIIVGFKIVPDDQMIKVVGDKLNTDAPLKVSTYDKNAIEEAIRLKEKFGGKVTGITVGN
CEEEEEEEECCCCHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCEEEEEEECC
NDRKSIREALAMGVDEVIAILVKDPDVYVTAMAIAENVKTLNPDIILFSEMTTDSGTSAL
CCHHHHHHHHHHCHHHHHEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
PAYVSELLGLPYISNVKSLKIEGNKVVADRGMVSYLETVESSLPIIVSVGGEINTPRIPS
HHHHHHHHCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCH
VKQIMESSKKPVKEVKFDAQSKVRIREIKPMIVNRKRIVIEESDINKAVDKLIEYLKSDG
HHHHHHHCCCCHHHHCCCCCCCEEHHHHCHHHCCCEEEEEECCHHHHHHHHHHHHHHHCC
VI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA