Click here to switch to the map view.

The map label for this gene is etfA [H]

Identifier: 15899478

GI number: 15899478

Start: 2519626

End: 2520489

Strand: Reverse

Name: etfA [H]

Synonym: SSO2762

Alternate gene names: 15899478

Gene position: 2520489-2519626 (Counterclockwise)

Preceding gene: 15899479

Following gene: 15899477

Centisome position: 84.23

GC content: 38.89

Gene sequence:

>864_bases
ATGAAAACTGTAGTGTTCTCGGAAAGTCCGGTATTCTTGAGAATGGCGGCAGCTGTAGCTCAAAGCTTCGGGGGAGAAGT
AATAGGAATATCCGACAATGAGAATGTTAAGTTCGTAAATAAACTATACATTATTGATAAAATAGATGAAGATGGTATTG
TGGATTTAATATCTTCACTATCTCCAGATGTAATACTAACTGGAAATGTGAGAAGGGATAGGGCAATAGCTGGAAGAGTA
GCGGGGAGGTTAAAGTTACCTATTGCTACTGATGTAGTCTCACTAAAGGTTGAAGATAAAAAGGTCACGTTAAATAGAGT
AGCCTATAGTGGAATGGGGTTAGTTACTCTAGAGAGCGAGTTACCAATTGTCATAACTATTGCAAATACGCAATTACAAC
CTAAGGAACTTCAGCCCAGTGTAGAGAAGGTTCAATTGAAAGAGGGTAGGGTTAAAATTGTCGGTAGGAAATCAACTTCC
TCTGGAGTTAATTTAGCTACTGCAGATATTGTAGTTGGTGTGGGAAGAGGAATTGGATCTAAGGAAAACGTAAAATATGC
TGAAGAATTGGCAAAGGCATTAGGTGGAGCAGTTGGTGGAAGCAGACCAGTGGCTGCCGAGCTCAATTGGGTTTCAGAAG
ATAGACAAATAGGTTTATCCGGTTTAAGAATTAGGCCAAAATTGTATATAGCCTTGGGAATATCTGGTCAGCCTCAGCAT
ATAGCTGGTATAAGGGATTCGAAAATTATAGTTGCTGTTAATATTGATAAAAACGCCCCAATACTTGAAAATGCAGATTA
CTTGGTTGTAGGCAACGCGATTGATTTCTGTAAAGCTATGTTGAGTAAGCTAGGGAAAAAATAA

Upstream 100 bases:

>100_bases
ATGATTGTGAATAGAAAGAGAATAGTTATTGAAGAGAGCGATATTAATAAAGCTGTTGATAAATTAATTGAATATTTAAA
GTCTGATGGGGTGATCTAAT

Downstream 100 bases:

>100_bases
TAATGATAAAAACGATTTTATTTTAATGGTATTTCCTTTTAAGTCCTTGGAGGATTTTAAAGTAGAAATAACCCAAGATC
ATGAATTATTAAGAAGTGCA

Product: electron transfer flavoprotein, subunit alpha (etfA)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKTVVFSESPVFLRMAAAVAQSFGGEVIGISDNENVKFVNKLYIIDKIDEDGIVDLISSLSPDVILTGNVRRDRAIAGRV
AGRLKLPIATDVVSLKVEDKKVTLNRVAYSGMGLVTLESELPIVITIANTQLQPKELQPSVEKVQLKEGRVKIVGRKSTS
SGVNLATADIVVGVGRGIGSKENVKYAEELAKALGGAVGGSRPVAAELNWVSEDRQIGLSGLRIRPKLYIALGISGQPQH
IAGIRDSKIIVAVNIDKNAPILENADYLVVGNAIDFCKAMLSKLGKK

Sequences:

>Translated_287_residues
MKTVVFSESPVFLRMAAAVAQSFGGEVIGISDNENVKFVNKLYIIDKIDEDGIVDLISSLSPDVILTGNVRRDRAIAGRV
AGRLKLPIATDVVSLKVEDKKVTLNRVAYSGMGLVTLESELPIVITIANTQLQPKELQPSVEKVQLKEGRVKIVGRKSTS
SGVNLATADIVVGVGRGIGSKENVKYAEELAKALGGAVGGSRPVAAELNWVSEDRQIGLSGLRIRPKLYIALGISGQPQH
IAGIRDSKIIVAVNIDKNAPILENADYLVVGNAIDFCKAMLSKLGKK
>Mature_287_residues
MKTVVFSESPVFLRMAAAVAQSFGGEVIGISDNENVKFVNKLYIIDKIDEDGIVDLISSLSPDVILTGNVRRDRAIAGRV
AGRLKLPIATDVVSLKVEDKKVTLNRVAYSGMGLVTLESELPIVITIANTQLQPKELQPSVEKVQLKEGRVKIVGRKSTS
SGVNLATADIVVGVGRGIGSKENVKYAEELAKALGGAVGGSRPVAAELNWVSEDRQIGLSGLRIRPKLYIALGISGQPQH
IAGIRDSKIIVAVNIDKNAPILENADYLVVGNAIDFCKAMLSKLGKK

Specific function: Required for anaerobic carnitine reduction. May bring reductant to CaiA [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI4503607, Length=219, Percent_Identity=35.1598173515982, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI189181759, Length=219, Percent_Identity=35.1598173515982, Blast_Score=109, Evalue=4e-24,
Organism=Escherichia coli, GI1786226, Length=306, Percent_Identity=32.3529411764706, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1787990, Length=304, Percent_Identity=31.9078947368421, Blast_Score=145, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17506929, Length=227, Percent_Identity=37.0044052863436, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6325261, Length=123, Percent_Identity=40.650406504065, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17136898, Length=230, Percent_Identity=36.0869565217391, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24652801, Length=230, Percent_Identity=36.0869565217391, Blast_Score=111, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 30621; Mature: 30621

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVVFSESPVFLRMAAAVAQSFGGEVIGISDNENVKFVNKLYIIDKIDEDGIVDLISSL
CCEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHC
SPDVILTGNVRRDRAIAGRVAGRLKLPIATDVVSLKVEDKKVTLNRVAYSGMGLVTLESE
CCCEEEECCCCCCHHHHHHHCCEEECCEEEEEEEEEEECCEEEEEEEEECCCEEEEECCC
LPIVITIANTQLQPKELQPSVEKVQLKEGRVKIVGRKSTSSGVNLATADIVVGVGRGIGS
CCEEEEEECCCCCCHHCCCCHHEEEECCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCC
KENVKYAEELAKALGGAVGGSRPVAAELNWVSEDRQIGLSGLRIRPKLYIALGISGQPQH
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCEEEEEEECCCCCCC
IAGIRDSKIIVAVNIDKNAPILENADYLVVGNAIDFCKAMLSKLGKK
EECCCCCEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTVVFSESPVFLRMAAAVAQSFGGEVIGISDNENVKFVNKLYIIDKIDEDGIVDLISSL
CCEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHC
SPDVILTGNVRRDRAIAGRVAGRLKLPIATDVVSLKVEDKKVTLNRVAYSGMGLVTLESE
CCCEEEECCCCCCHHHHHHHCCEEECCEEEEEEEEEEECCEEEEEEEEECCCEEEEECCC
LPIVITIANTQLQPKELQPSVEKVQLKEGRVKIVGRKSTSSGVNLATADIVVGVGRGIGS
CCEEEEEECCCCCCHHCCCCHHEEEECCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCC
KENVKYAEELAKALGGAVGGSRPVAAELNWVSEDRQIGLSGLRIRPKLYIALGISGQPQH
CCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCEEEEEEECCCCCCC
IAGIRDSKIIVAVNIDKNAPILENADYLVVGNAIDFCKAMLSKLGKK
EECCCCCEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA