| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is yebQ [C]
Identifier: 15899431
GI number: 15899431
Start: 2467764
End: 2469173
Strand: Direct
Name: yebQ [C]
Synonym: SSO2716
Alternate gene names: 15899431
Gene position: 2467764-2469173 (Clockwise)
Preceding gene: 15899430
Following gene: 15899434
Centisome position: 82.47
GC content: 35.11
Gene sequence:
>1410_bases ATGAATACTAACTCTATCCTGATTGTATTAACTCTAGGATCTCTAATGGCTGCAGTGGATACTACAATAGTATTATTAGC ACTTCCTACTATTACATCGAGCTTACATACCGACTTATTGTCGTCAATATGGGTGCTTTTAGCTTACATGATAGTTATTT CAGTTTTATCAACACAAGCTGGCAGAATAGGGGATTTATTTGGAAAAGGAAAGATCTATAATTTAGGATTTGTAATATTT ACAGCAGCGTCAGCCTTATGTGGTATTTCAAGTAATATAGATATGCTGATTGTATTTAGAATTATACAAGCTATTGGTGG GTCAATGTTGGTGGCTAACAGTTCATCCATAGTGGCTGATGTTTTTCCACCTAATAGAAGAGGTAAGGCTTATGGAATAA CTAGTTTAGGTTGGAACATAGGGGCGTTAGTGGGTATTGTTTTAGGTGGAGTTTTGACTACTTTCTTTGGCTGGCAATAC ATATTTTACATTAATGTACCGATTGGAATAGTCGCAGTCCTTTTAGGAGTAATGAACATTAAGGATATCAATAAGGTTAA TACGAAACTGGATATGCTTGGAGCAATCCTTTTGGGCATTTCATTAGCATTAATATCGTTATCATTAATGTTTATTGCGG CATCTGGAATTTCTACTGATAATATTATAGAGTTAGCTTTAGGTGTAGCGTTAATACCATTTTTCCTATTAAATGAAACT AGGAGTAAATATCCTATATTAAATTTGAAAATATTTAAAATAAGGCTTTTAACGTATTCAATCTTAGCTAATTTCCTCCA AGGGATTGGAGGGCTTTCCTTGAGTTTCTTACTTATAATGTATCTTCAAGGCGTTAGAGGACTTAGCCCTTTAGATAGTT CCTTATTATTGACACCAGGTTATGTTATTGCTAGCATTTTAGCTCCATTTATGGGAAGAGTAGCGGATAGGGGAAAGCCG GGTATTGTAGCTGGTATAGGTTTGATGTTCATTTTCATTACCATGATTCTGTACTTCTTCTTACTAACACCGACTACTGA CTATTATTTAATTGTAGGAATTAGTGCAATTACTGGTATAGGCTCTGCGATGTTTTGGCCGTCCAACTCAACTGCTATAA TGTTTCATGCACCTAAAGAATATTACGGTTCGGTCTCGGGTTTATCCAGAACGTTAGGGAATATAGGTACTATTCTAAGT TACGTTTTAAGTATAGTAGTTGCAACTTTAAGTATACCCAGAAGTGTTGCCTTTGAGATATTCATAGGAACTACCACGTT GAATGGGGACGTCAGTGTAACGTTTGTTAATGGATTACATTTTGCTTTTCTCATATCTTCGATTATAATAGTAGTAGCTA TGATATTCTCTTTTATGAGTGGGAAAACTCAAGAAAGTGCCATCAAATAG
Upstream 100 bases:
>100_bases TGTTAAGGGAGCATGATAATTGATCAACTCGTTAACAATTACCGGGTTTACCGTTTATTAAGCAAACTTTTTAAGGTCTA ATGTACCAGTTTTAGACACG
Downstream 100 bases:
>100_bases AATCCATTTTTATTAGTACTTTTATGTTAGGTAGTTCTATTACATATTTTCTGAACCACTCGTTAATATTGTCTATATAA CCTACCTTATCCACTATTTT
Product: permease, multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MNTNSILIVLTLGSLMAAVDTTIVLLALPTITSSLHTDLLSSIWVLLAYMIVISVLSTQAGRIGDLFGKGKIYNLGFVIF TAASALCGISSNIDMLIVFRIIQAIGGSMLVANSSSIVADVFPPNRRGKAYGITSLGWNIGALVGIVLGGVLTTFFGWQY IFYINVPIGIVAVLLGVMNIKDINKVNTKLDMLGAILLGISLALISLSLMFIAASGISTDNIIELALGVALIPFFLLNET RSKYPILNLKIFKIRLLTYSILANFLQGIGGLSLSFLLIMYLQGVRGLSPLDSSLLLTPGYVIASILAPFMGRVADRGKP GIVAGIGLMFIFITMILYFFLLTPTTDYYLIVGISAITGIGSAMFWPSNSTAIMFHAPKEYYGSVSGLSRTLGNIGTILS YVLSIVVATLSIPRSVAFEIFIGTTTLNGDVSVTFVNGLHFAFLISSIIIVVAMIFSFMSGKTQESAIK
Sequences:
>Translated_469_residues MNTNSILIVLTLGSLMAAVDTTIVLLALPTITSSLHTDLLSSIWVLLAYMIVISVLSTQAGRIGDLFGKGKIYNLGFVIF TAASALCGISSNIDMLIVFRIIQAIGGSMLVANSSSIVADVFPPNRRGKAYGITSLGWNIGALVGIVLGGVLTTFFGWQY IFYINVPIGIVAVLLGVMNIKDINKVNTKLDMLGAILLGISLALISLSLMFIAASGISTDNIIELALGVALIPFFLLNET RSKYPILNLKIFKIRLLTYSILANFLQGIGGLSLSFLLIMYLQGVRGLSPLDSSLLLTPGYVIASILAPFMGRVADRGKP GIVAGIGLMFIFITMILYFFLLTPTTDYYLIVGISAITGIGSAMFWPSNSTAIMFHAPKEYYGSVSGLSRTLGNIGTILS YVLSIVVATLSIPRSVAFEIFIGTTTLNGDVSVTFVNGLHFAFLISSIIIVVAMIFSFMSGKTQESAIK >Mature_469_residues MNTNSILIVLTLGSLMAAVDTTIVLLALPTITSSLHTDLLSSIWVLLAYMIVISVLSTQAGRIGDLFGKGKIYNLGFVIF TAASALCGISSNIDMLIVFRIIQAIGGSMLVANSSSIVADVFPPNRRGKAYGITSLGWNIGALVGIVLGGVLTTFFGWQY IFYINVPIGIVAVLLGVMNIKDINKVNTKLDMLGAILLGISLALISLSLMFIAASGISTDNIIELALGVALIPFFLLNET RSKYPILNLKIFKIRLLTYSILANFLQGIGGLSLSFLLIMYLQGVRGLSPLDSSLLLTPGYVIASILAPFMGRVADRGKP GIVAGIGLMFIFITMILYFFLLTPTTDYYLIVGISAITGIGSAMFWPSNSTAIMFHAPKEYYGSVSGLSRTLGNIGTILS YVLSIVVATLSIPRSVAFEIFIGTTTLNGDVSVTFVNGLHFAFLISSIIIVVAMIFSFMSGKTQESAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=399, Percent_Identity=30.0751879699248, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1790195, Length=346, Percent_Identity=29.4797687861272, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1789042, Length=410, Percent_Identity=29.5121951219512, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1788392, Length=299, Percent_Identity=28.4280936454849, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788710, Length=419, Percent_Identity=25.7756563245823, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322958, Length=142, Percent_Identity=30.9859154929577, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6319770, Length=171, Percent_Identity=29.8245614035088, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323735, Length=179, Percent_Identity=27.9329608938547, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324954, Length=276, Percent_Identity=24.6376811594203, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50071; Mature: 50071
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNSILIVLTLGSLMAAVDTTIVLLALPTITSSLHTDLLSSIWVLLAYMIVISVLSTQA CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRIGDLFGKGKIYNLGFVIFTAASALCGISSNIDMLIVFRIIQAIGGSMLVANSSSIVAD CCHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEE VFPPNRRGKAYGITSLGWNIGALVGIVLGGVLTTFFGWQYIFYINVPIGIVAVLLGVMNI CCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCH KDINKVNTKLDMLGAILLGISLALISLSLMFIAASGISTDNIIELALGVALIPFFLLNET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC RSKYPILNLKIFKIRLLTYSILANFLQGIGGLSLSFLLIMYLQGVRGLSPLDSSLLLTPG CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCH YVIASILAPFMGRVADRGKPGIVAGIGLMFIFITMILYFFLLTPTTDYYLIVGISAITGI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCC GSAMFWPSNSTAIMFHAPKEYYGSVSGLSRTLGNIGTILSYVLSIVVATLSIPRSVAFEI CCEEEECCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE FIGTTTLNGDVSVTFVNGLHFAFLISSIIIVVAMIFSFMSGKTQESAIK EEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MNTNSILIVLTLGSLMAAVDTTIVLLALPTITSSLHTDLLSSIWVLLAYMIVISVLSTQA CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRIGDLFGKGKIYNLGFVIFTAASALCGISSNIDMLIVFRIIQAIGGSMLVANSSSIVAD CCHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEE VFPPNRRGKAYGITSLGWNIGALVGIVLGGVLTTFFGWQYIFYINVPIGIVAVLLGVMNI CCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHCH KDINKVNTKLDMLGAILLGISLALISLSLMFIAASGISTDNIIELALGVALIPFFLLNET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC RSKYPILNLKIFKIRLLTYSILANFLQGIGGLSLSFLLIMYLQGVRGLSPLDSSLLLTPG CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCH YVIASILAPFMGRVADRGKPGIVAGIGLMFIFITMILYFFLLTPTTDYYLIVGISAITGI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCC GSAMFWPSNSTAIMFHAPKEYYGSVSGLSRTLGNIGTILSYVLSIVVATLSIPRSVAFEI CCEEEECCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE FIGTTTLNGDVSVTFVNGLHFAFLISSIIIVVAMIFSFMSGKTQESAIK EEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]