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The map label for this gene is amaB [H]

Identifier: 15899434

GI number: 15899434

Start: 2471736

End: 2472941

Strand: Direct

Name: amaB [H]

Synonym: SSO2719

Alternate gene names: 15899434

Gene position: 2471736-2472941 (Clockwise)

Preceding gene: 15899431

Following gene: 15899435

Centisome position: 82.6

GC content: 37.89

Gene sequence:

>1206_bases
ATGAATCCAGAAAGGTTTTTGACAACTTTCCATTCGTTAACTAATATAGGTTGGACTGAGGACGGAGTACTGAGGCTTGC
TTTAAATGAATATGATATAAAAGTAAGAGAGGAACTAATAAAAATTCTATCGAGTATAGGTGTTCACATAATGGTCGATG
ATGCCGGAAATATAATTGGAGAATTAGGTGGTAAACTAAGTGATGCTATTGCGATTGGATCACATATGGATTCCGTGCCT
TATGGAGGAAAATACGACGGTTTTTATGGCGTTATGGCGGGACTTGAAGTATTACGAAGTATTAAAGAGAGAGGCATATC
TAATCATTCTATTAAACTTATAGATTTTACGAATGAAGAGGGTTCTAGATTTCAACCCTCACTTCTAGGCTCGGGATTAA
CCACAGGTATCTTCGATAAAAACTACGTCTACTCAAGGAGAGATAAGGATAATATAAGTTTTGAGGAAGCGTTAAGGGTT
TCCGGATTTATGGGAGATGAAAGCAATAGACTAATGCATATGAAGCCTAACTACTATCTAGAGCTTCACATAGAACAAGG
TCCAATTTTAGAGGAAGAGGGGTATCAAATTGGAATACCTTTAGGAATTGCTGGTTTAAGCGTATATGAATTCACATTTA
AGGGTCAGTCTAGTCAAACCGGACCTACACCAATGGATAGGAGAAGGGATGCCCTAGTAGGCGCATCTAAATTCGTAGTT
AGCGTTAGGGATCACGCAAAGAAGCAGGAAAACTTAAGGGCCACTGTTGGTATACTTAATGTTAAACCAAATGTATACAA
CGCTATACCTAGGGAAGTCAGACTCACTGTTGACGTTAGGAGTATTGAGAGGAATAGAATAGATCACACTATAAATGAAT
TTGTTAATATTGCAAAAAGTATTGCCGACGACGAGAAACTAGAAGTTGAATATAGGCATCTGTGGACAGCTAATCCTGTG
AGTTTTTCCGACGAAGTCATTAGTGTTATAGAAAGAGCGTGTAAAGAGTTAAGCATGAGATATAAGTTTATGTATAGTTG
GGCAGGGCATGATGCACAGTATATGACGAAGATTTCTAAAGTCGGCATGATATTTATTCCATCTCATTTAGGCATTAGTC
ACGCAAAGGAAGAATACTCCTCAGATGAGGATATGTTAAACGGGCTAAGAGTACTAGAGAAAGCTGTAGAACTTTTAAAC
AGTTGA

Upstream 100 bases:

>100_bases
TAGAGAGGAAGGGATTAGTTATCTTAAAGAAATAAGGTTTTACCGATCTCCTTAAATAGCATCGTTAAGGATTTTTAACC
TATAGCTAATATATTATTTA

Downstream 100 bases:

>100_bases
TGATTATATTCAATTTTTGTACTAATTTTAATCATCTGTGTAAAAAGCTTATAACCCTTGCTTATAAAAATAAGATAGAA
TATGGGAGAAATAGAAGATA

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNPERFLTTFHSLTNIGWTEDGVLRLALNEYDIKVREELIKILSSIGVHIMVDDAGNIIGELGGKLSDAIAIGSHMDSVP
YGGKYDGFYGVMAGLEVLRSIKERGISNHSIKLIDFTNEEGSRFQPSLLGSGLTTGIFDKNYVYSRRDKDNISFEEALRV
SGFMGDESNRLMHMKPNYYLELHIEQGPILEEEGYQIGIPLGIAGLSVYEFTFKGQSSQTGPTPMDRRRDALVGASKFVV
SVRDHAKKQENLRATVGILNVKPNVYNAIPREVRLTVDVRSIERNRIDHTINEFVNIAKSIADDEKLEVEYRHLWTANPV
SFSDEVISVIERACKELSMRYKFMYSWAGHDAQYMTKISKVGMIFIPSHLGISHAKEEYSSDEDMLNGLRVLEKAVELLN
S

Sequences:

>Translated_401_residues
MNPERFLTTFHSLTNIGWTEDGVLRLALNEYDIKVREELIKILSSIGVHIMVDDAGNIIGELGGKLSDAIAIGSHMDSVP
YGGKYDGFYGVMAGLEVLRSIKERGISNHSIKLIDFTNEEGSRFQPSLLGSGLTTGIFDKNYVYSRRDKDNISFEEALRV
SGFMGDESNRLMHMKPNYYLELHIEQGPILEEEGYQIGIPLGIAGLSVYEFTFKGQSSQTGPTPMDRRRDALVGASKFVV
SVRDHAKKQENLRATVGILNVKPNVYNAIPREVRLTVDVRSIERNRIDHTINEFVNIAKSIADDEKLEVEYRHLWTANPV
SFSDEVISVIERACKELSMRYKFMYSWAGHDAQYMTKISKVGMIFIPSHLGISHAKEEYSSDEDMLNGLRVLEKAVELLN
S
>Mature_401_residues
MNPERFLTTFHSLTNIGWTEDGVLRLALNEYDIKVREELIKILSSIGVHIMVDDAGNIIGELGGKLSDAIAIGSHMDSVP
YGGKYDGFYGVMAGLEVLRSIKERGISNHSIKLIDFTNEEGSRFQPSLLGSGLTTGIFDKNYVYSRRDKDNISFEEALRV
SGFMGDESNRLMHMKPNYYLELHIEQGPILEEEGYQIGIPLGIAGLSVYEFTFKGQSSQTGPTPMDRRRDALVGASKFVV
SVRDHAKKQENLRATVGILNVKPNVYNAIPREVRLTVDVRSIERNRIDHTINEFVNIAKSIADDEKLEVEYRHLWTANPV
SFSDEVISVIERACKELSMRYKFMYSWAGHDAQYMTKISKVGMIFIPSHLGISHAKEEYSSDEDMLNGLRVLEKAVELLN
S

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=375, Percent_Identity=28.8, Blast_Score=177, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45165; Mature: 45165

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPERFLTTFHSLTNIGWTEDGVLRLALNEYDIKVREELIKILSSIGVHIMVDDAGNIIG
CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCHHHHH
ELGGKLSDAIAIGSHMDSVPYGGKYDGFYGVMAGLEVLRSIKERGISNHSIKLIDFTNEE
HHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
GSRFQPSLLGSGLTTGIFDKNYVYSRRDKDNISFEEALRVSGFMGDESNRLMHMKPNYYL
CCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCEEE
ELHIEQGPILEEEGYQIGIPLGIAGLSVYEFTFKGQSSQTGPTPMDRRRDALVGASKFVV
EEEECCCCCCCCCCCEEECEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCHHHHEE
SVRDHAKKQENLRATVGILNVKPNVYNAIPREVRLTVDVRSIERNRIDHTINEFVNIAKS
EHHHHHHHHHCCEEEEEEEEECCHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
IADDEKLEVEYRHLWTANPVSFSDEVISVIERACKELSMRYKFMYSWAGHDAQYMTKISK
HCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH
VGMIFIPSHLGISHAKEEYSSDEDMLNGLRVLEKAVELLNS
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPERFLTTFHSLTNIGWTEDGVLRLALNEYDIKVREELIKILSSIGVHIMVDDAGNIIG
CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCHHHHH
ELGGKLSDAIAIGSHMDSVPYGGKYDGFYGVMAGLEVLRSIKERGISNHSIKLIDFTNEE
HHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
GSRFQPSLLGSGLTTGIFDKNYVYSRRDKDNISFEEALRVSGFMGDESNRLMHMKPNYYL
CCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCEEE
ELHIEQGPILEEEGYQIGIPLGIAGLSVYEFTFKGQSSQTGPTPMDRRRDALVGASKFVV
EEEECCCCCCCCCCCEEECEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCHHHHEE
SVRDHAKKQENLRATVGILNVKPNVYNAIPREVRLTVDVRSIERNRIDHTINEFVNIAKS
EHHHHHHHHHCCEEEEEEEEECCHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
IADDEKLEVEYRHLWTANPVSFSDEVISVIERACKELSMRYKFMYSWAGHDAQYMTKISK
HCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH
VGMIFIPSHLGISHAKEEYSSDEDMLNGLRVLEKAVELLNS
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]